CETN3-AS1

Summary

CETN3-AS1 (CETN3 antisense RNA 1, HGNC:59093) is a long non-coding RNA gene on chromosome 5q14.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:59093
Approved symbol	CETN3-AS1
Name	CETN3 antisense RNA 1
Location	5q14.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000255647
Ensembl biotype	lncRNA
Entrez	731157

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 6 lncRNA, 1 TEC

ENST00000546238, ENST00000624106, ENST00000764614, ENST00000764615, ENST00000764616, ENST00000764617, ENST00000764618

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000546238 — 2 exons

Exon	Start	End
ENSE00002290472	90410500	90410669
ENSE00004121668	90410011	90410304

Expression profiles

Bgee: expression breadth ubiquitous, 148 present calls, max score 90.38.

Top tissues by expression

235 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	90.38	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	87.36	gold quality
ventricular zone	UBERON:0003053	72.99	gold quality
ganglionic eminence	UBERON:0004023	72.95	gold quality
colonic epithelium	UBERON:0000397	72.64	gold quality
bone marrow cell	CL:0002092	70.02	silver quality
sperm	CL:0000019	67.17	gold quality
calcaneal tendon	UBERON:0003701	61.06	gold quality
smooth muscle tissue	UBERON:0001135	60.60	gold quality
islet of Langerhans	UBERON:0000006	60.40	gold quality
monocyte	CL:0000576	57.58	gold quality
stromal cell of endometrium	CL:0002255	57.58	gold quality
right testis	UBERON:0004534	56.66	gold quality
vermiform appendix	UBERON:0001154	56.26	gold quality
left testis	UBERON:0004533	56.14	gold quality
prefrontal cortex	UBERON:0000451	55.95	gold quality
testis	UBERON:0000473	55.77	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	55.45	gold quality
rectum	UBERON:0001052	55.11	gold quality
pancreas	UBERON:0001264	54.54	gold quality
gall bladder	UBERON:0002110	54.53	gold quality
lymph node	UBERON:0000029	53.44	gold quality
epithelium of nasopharynx	UBERON:0001951	52.96	gold quality
tendon	UBERON:0000043	51.86	gold quality
right coronary artery	UBERON:0001625	51.86	gold quality
muscle of leg	UBERON:0001383	51.59	gold quality
adrenal tissue	UBERON:0018303	51.47	gold quality
adenohypophysis	UBERON:0002196	50.65	gold quality
gastrocnemius	UBERON:0001388	50.48	gold quality
granulocyte	CL:0000094	49.56	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.57

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.