CFAP184-OT1

Summary

CFAP184-OT1 (CFAP184 overlapping transcript 1, HGNC:58725) is a long non-coding RNA gene on chromosome 4p16.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58725
Approved symbol	CFAP184-OT1
Name	CFAP184 overlapping transcript 1
Location	4p16.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000245748
Ensembl biotype	lncRNA
Entrez	100129931

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000500031, ENST00000756409

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000500031 — 4 exons

Exon	Start	End
ENSE00001972907	7030554	7034053
ENSE00001983556	7035171	7035274
ENSE00001987760	7044980	7045102
ENSE00001988106	7045659	7046231

Expression profiles

Bgee: expression breadth ubiquitous, 118 present calls, max score 79.30.

Top tissues by expression

118 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	79.30	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	69.72	gold quality
cortical plate	UBERON:0005343	65.30	gold quality
bone marrow	UBERON:0002371	63.26	gold quality
bone marrow cell	CL:0002092	62.84	silver quality
ventricular zone	UBERON:0003053	61.50	gold quality
ganglionic eminence	UBERON:0004023	61.47	gold quality
hindlimb stylopod muscle	UBERON:0004252	58.52	gold quality
blood	UBERON:0000178	58.51	gold quality
skeletal muscle tissue	UBERON:0001134	55.12	gold quality
monocyte	CL:0000576	54.11	gold quality
prefrontal cortex	UBERON:0000451	53.17	gold quality
calcaneal tendon	UBERON:0003701	51.80	silver quality
lower esophagus mucosa	UBERON:0035834	50.63	gold quality
lymph node	UBERON:0000029	50.46	gold quality
tonsil	UBERON:0002372	50.35	silver quality
placenta	UBERON:0001987	50.26	gold quality
vermiform appendix	UBERON:0001154	49.73	gold quality
frontal cortex	UBERON:0001870	49.56	gold quality
muscle of leg	UBERON:0001383	49.54	gold quality
duodenum	UBERON:0002114	48.86	gold quality
cortex of kidney	UBERON:0001225	48.78	gold quality
left adrenal gland cortex	UBERON:0035825	48.72	gold quality
adult mammalian kidney	UBERON:0000082	48.61	gold quality
liver	UBERON:0002107	48.55	silver quality
kidney	UBERON:0002113	48.34	gold quality
gastrocnemius	UBERON:0001388	48.24	gold quality
superior frontal gyrus	UBERON:0002661	48.20	gold quality
islet of Langerhans	UBERON:0000006	48.06	gold quality
adrenal gland	UBERON:0002369	47.78	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.45

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.