CFAP221
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Also known as FAP221PCDP1
Summary
CFAP221 (cilia and flagella associated protein 221, HGNC:33720) is a protein-coding gene on chromosome 2q14.2, encoding Cilia- and flagella-associated protein 221 (Q4G0U5). May play a role in cilium morphogenesis and ciliary function.
Predicted to enable calmodulin binding activity. Predicted to be involved in motile cilium assembly. Predicted to act upstream of or within epithelial cilium movement involved in extracellular fluid movement; establishment of localization in cell; and sperm flagellum assembly. Predicted to be located in axoneme and manchette. Predicted to be active in 9+2 motile cilium.
Source: NCBI Gene 200373 — RefSeq curated summary.
At a glance
- Gene–disease (curated): primary ciliary dyskinesia (Definitive, ClinGen)
- GWAS associations: 2
- Clinical variants (ClinVar): 40 total — 3 pathogenic, 2 likely-pathogenic
- Phenotypes (HPO): 51
- MANE Select transcript:
NM_001271049
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:33720 |
| Approved symbol | CFAP221 |
| Name | cilia and flagella associated protein 221 |
| Location | 2q14.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | FAP221, PCDP1 |
| Ensembl gene | ENSG00000163075 |
| Ensembl biotype | protein_coding |
| OMIM | 618704 |
| Entrez | 200373 |
Gene structure
Transcript identifiers
Ensembl transcripts: 22 — 13 protein_coding, 5 nonsense_mediated_decay, 2 protein_coding_CDS_not_defined, 2 retained_intron
ENST00000295220, ENST00000413057, ENST00000413369, ENST00000434869, ENST00000442513, ENST00000443972, ENST00000463985, ENST00000464578, ENST00000475569, ENST00000488358, ENST00000594033, ENST00000594141, ENST00000594371, ENST00000597189, ENST00000598644, ENST00000599827, ENST00000600951, ENST00000881829, ENST00000881830, ENST00000881831, ENST00000955800, ENST00000955801
RefSeq mRNA: 1 — MANE Select: NM_001271049
NM_001271049
CCDS: CCDS33282
Canonical transcript exons
ENST00000413369 — 24 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001785570 | 119544449 | 119544510 |
| ENSE00003458459 | 119587119 | 119587222 |
| ENSE00003460650 | 119615611 | 119615709 |
| ENSE00003463803 | 119611653 | 119611742 |
| ENSE00003465259 | 119656362 | 119656661 |
| ENSE00003474788 | 119546085 | 119546270 |
| ENSE00003479469 | 119559928 | 119560026 |
| ENSE00003503533 | 119651974 | 119652069 |
| ENSE00003508686 | 119638259 | 119638417 |
| ENSE00003526341 | 119646958 | 119647050 |
| ENSE00003541432 | 119630570 | 119630677 |
| ENSE00003549331 | 119605181 | 119605289 |
| ENSE00003570740 | 119604876 | 119604987 |
| ENSE00003572484 | 119625583 | 119625688 |
| ENSE00003590319 | 119559689 | 119559775 |
| ENSE00003592420 | 119601218 | 119601377 |
| ENSE00003599903 | 119608502 | 119608589 |
| ENSE00003602368 | 119604672 | 119604792 |
| ENSE00003607243 | 119639781 | 119639872 |
| ENSE00003608936 | 119630767 | 119630901 |
| ENSE00003639186 | 119629875 | 119629955 |
| ENSE00003640617 | 119549085 | 119549185 |
| ENSE00003692056 | 119627653 | 119627786 |
| ENSE00003789500 | 119562014 | 119562114 |
Expression profiles
Bgee: expression breadth ubiquitous, 181 present calls, max score 98.30.
FANTOM5 (CAGE): breadth broad, TPM avg 1.4449 / max 83.9018, expressed in 334 samples.
FANTOM5 promoters (4 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 22275 | 1.2073 | 309 |
| 22276 | 0.1443 | 90 |
| 22277 | 0.0770 | 38 |
| 22278 | 0.0163 | 4 |
Top tissues by expression
250 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right uterine tube | UBERON:0001302 | 98.30 | gold quality |
| sperm | CL:0000019 | 98.11 | gold quality |
| bronchial epithelial cell | CL:0002328 | 93.87 | gold quality |
| metanephros cortex | UBERON:0010533 | 92.78 | gold quality |
| bronchus | UBERON:0002185 | 92.65 | gold quality |
| right testis | UBERON:0004534 | 92.19 | gold quality |
| left testis | UBERON:0004533 | 92.18 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 91.47 | gold quality |
| testis | UBERON:0000473 | 89.93 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 89.81 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 88.65 | gold quality |
| oviduct epithelium | UBERON:0004804 | 88.27 | gold quality |
| epithelial cell of pancreas | CL:0000083 | 88.02 | gold quality |
| mucosa of paranasal sinus | UBERON:0005030 | 87.65 | gold quality |
| body of pancreas | UBERON:0001150 | 87.56 | gold quality |
| tibialis anterior | UBERON:0001385 | 85.45 | gold quality |
| pancreas | UBERON:0001264 | 85.37 | gold quality |
| fallopian tube | UBERON:0003889 | 83.70 | gold quality |
| metanephros | UBERON:0000081 | 83.36 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 83.21 | gold quality |
| adult mammalian kidney | UBERON:0000082 | 83.13 | gold quality |
| islet of Langerhans | UBERON:0000006 | 82.82 | gold quality |
| pancreatic ductal cell | CL:0002079 | 82.45 | silver quality |
| right frontal lobe | UBERON:0002810 | 82.38 | gold quality |
| right lung | UBERON:0002167 | 81.86 | gold quality |
| prefrontal cortex | UBERON:0000451 | 80.76 | gold quality |
| adenohypophysis | UBERON:0002196 | 80.66 | gold quality |
| pituitary gland | UBERON:0000007 | 80.38 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 80.05 | gold quality |
| hypothalamus | UBERON:0001898 | 79.97 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 17.79 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
12 targeting CFAP221, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-9902 | 99.89 | 69.15 | 2250 |
| HSA-MIR-153-5P | 99.89 | 73.86 | 6317 |
| HSA-MIR-3202 | 99.66 | 67.70 | 2737 |
| HSA-MIR-136-5P | 99.50 | 67.26 | 1153 |
| HSA-MIR-3678-3P | 99.31 | 67.10 | 1432 |
| HSA-MIR-4505 | 99.27 | 67.81 | 2678 |
| HSA-MIR-5787 | 99.22 | 67.86 | 2628 |
| HSA-MIR-34C-3P | 98.11 | 65.60 | 858 |
| HSA-MIR-3652 | 97.71 | 65.43 | 1890 |
| HSA-MIR-5196-3P | 97.57 | 65.98 | 979 |
| HSA-MIR-4430 | 97.47 | 65.61 | 1813 |
| HSA-MIR-663B | 97.40 | 62.91 | 664 |
Literature-anchored findings (GeneRIF, showing 2)
- plays an important role in ciliary and flagellar biogenesis and motility sperm flagella and the cilia of respiratory epithelial cells and brain ependymal cells in both mice and humans (PMID:18039845)
- These results show that genetic variants in CFAP221 cause Pprimary ciliary dyskinesia (PCD) and that CFAP221 should be considered a candidate gene in cases where PCD is suspected but cilia structure and beat frequency appear normal. (PMID:31636325)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | cfap221 | ENSDARG00000087107 |
| mus_musculus | Cfap221 | ENSMUSG00000036962 |
| rattus_norvegicus | Cfap221 | ENSRNOG00000056781 |
Protein
Protein identifiers
Cilia- and flagella-associated protein 221 — Q4G0U5 (reviewed: Q4G0U5)
Alternative names: Primary ciliary dyskinesia protein 1
All UniProt accessions (12): Q4G0U5, H7BZW0, H7C1D6, H7C3Q0, M0QWZ6, M0QZ41, M0QZN4, M0QZV1, M0R095, M0R1M9, M0R1R6, X6RIU2
UniProt curated annotations — full annotation on UniProt →
Function. May play a role in cilium morphogenesis and ciliary function.
Subunit / interactions. Interacts with calmodulin; calcium-dependent.
Subcellular location. Cytoplasm. Cytoskeleton. Cilium axoneme.
Tissue specificity. Expressed in ciliated respiratory epithelial cells and brain ependymal cells (at protein level).
Disease relevance. Ciliary dyskinesia, primary, 55 (CILD55) [MIM:279000] An autosomal recessive form of primary ciliary dyskinesia, a disorder characterized by abnormalities of motile cilia. Respiratory infections leading to chronic inflammation and bronchiectasis are recurrent, due to defects in the respiratory cilia. Male infertility may result from reduced motility of spermatozoa. Some CILD55 affected individuals also exhibit obstructive azoospermia. The disease is caused by variants affecting the gene represented in this entry.
Similarity. Belongs to the PCDP1 family.
Isoforms (4)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q4G0U5-1 | 1 | yes |
| Q4G0U5-2 | 2 | |
| Q4G0U5-3 | 3 | |
| Q4G0U5-4 | 4 |
RefSeq proteins (1): NP_001257978* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR013783 | Ig-like_fold | Homologous_superfamily |
| IPR029676 | CFAP221 | Family |
UniProt features (12 total): splice variant 6, region of interest 2, sequence variant 2, chain 1, sequence conflict 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q4G0U5-F1 | 63.53 | 0.11 |
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 150 (showing top):
GOBP_RESPIRATORY_GASEOUS_EXCHANGE_BY_RESPIRATORY_SYSTEM, GOBP_RESPIRATORY_SYSTEM_PROCESS, GOCC_MICROTUBULE_ORGANIZING_CENTER, GOBP_CILIUM_ORGANIZATION, GOBP_CILIUM_MOVEMENT, GOBP_ORGANELLE_ASSEMBLY, GOBP_MOTILE_CILIUM_ASSEMBLY, GOBP_CELL_PROJECTION_ORGANIZATION, chr2q14, GOCC_CENTRIOLE, GOCC_CYTOPLASMIC_REGION, GOCC_CILIARY_TIP, GOCC_MOTILE_CILIUM, GOCC_CILIUM, MATZUK_SPERMATOZOA
GO Biological Process (8): motile cilium assembly (GO:0044458), establishment of localization in cell (GO:0051649), cilium assembly (GO:0060271), cerebrospinal fluid circulation (GO:0090660), mucociliary clearance (GO:0120197), sperm flagellum assembly (GO:0120316), cilium movement (GO:0003341), cell projection organization (GO:0030030)
GO Molecular Function (1): calmodulin binding (GO:0005516)
GO Cellular Component (10): manchette (GO:0002177), extracellular region (GO:0005576), cytoplasm (GO:0005737), cilium (GO:0005929), axoneme (GO:0005930), sperm flagellum (GO:0036126), glial cell projection (GO:0097386), 9+2 motile cilium (GO:0097729), cytoskeleton (GO:0005856), cell projection (GO:0042995)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 5 |
| epithelial cilium movement involved in extracellular fluid movement | 2 |
| plasma membrane bounded cell projection | 2 |
| cilium assembly | 1 |
| establishment of localization | 1 |
| cellular localization | 1 |
| axoneme assembly | 1 |
| intraciliary transport involved in cilium assembly | 1 |
| cilium organization | 1 |
| protein localization to cilium | 1 |
| organelle assembly | 1 |
| trans-Golgi to periciliary membrane compartment transport | 1 |
| plasma membrane bounded cell projection assembly | 1 |
| ciliary transition zone assembly | 1 |
| nervous system process | 1 |
| respiratory system process | 1 |
| developmental process involved in reproduction | 1 |
| spermatid development | 1 |
| flagellated sperm motility | 1 |
| motile cilium assembly | 1 |
| microtubule-based movement | 1 |
| cellular component organization | 1 |
| protein binding | 1 |
| microtubule cytoskeleton | 1 |
| intracellular anatomical structure | 1 |
| intraciliary transport particle | 1 |
| membrane-bounded organelle | 1 |
| cytoskeleton | 1 |
| microtubule | 1 |
| ciliary plasm | 1 |
| 9+2 motile cilium | 1 |
| radial spoke | 1 |
| motile cilium | 1 |
| inner dynein arm | 1 |
| outer dynein arm | 1 |
| axonemal central pair | 1 |
| axonemal doublet microtubule | 1 |
| intracellular membraneless organelle | 1 |
Protein interactions and networks
STRING
997 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| CFAP221 | WDR93 | Q6P2C0 | 839 |
| CFAP221 | CALML6 | Q8TD86 | 776 |
| CFAP221 | CALML3 | P27482 | 776 |
| CFAP221 | CALML5 | Q9NZT1 | 776 |
| CFAP221 | CALML4 | Q96GE6 | 776 |
| CFAP221 | CALM1 | P02593 | 775 |
| CFAP221 | SPAG6 | O75602 | 736 |
| CFAP221 | C1D | Q13901 | 696 |
| CFAP221 | HYDIN | Q4G0P3 | 584 |
| CFAP221 | SPAG17 | Q6Q759 | 583 |
| CFAP221 | SPEF2 | Q9C093 | 582 |
| CFAP221 | CFAP54 | Q96N23 | 571 |
| CFAP221 | LRRC56 | Q8IYG6 | 507 |
| CFAP221 | GAS2L2 | Q8NHY3 | 507 |
| CFAP221 | RSPH1 | Q8WYR4 | 505 |
IntAct
0 interactions, top by confidence:
BioGRID (3): CFAP221 (Affinity Capture-MS), PCBP2 (Cross-Linking-MS (XL-MS)), EEA1 (Cross-Linking-MS (XL-MS))
ESM2 similar proteins: A0A1B0GVH7, A6PVS8, A8DZJ1, A9Q751, D3ZSP7, D4AEC2, Q08AD1, Q08CX2, Q14DL3, Q2T9P0, Q2TA00, Q32KQ1, Q3UZ57, Q3V0J4, Q4G0U5, Q4R7B1, Q4R7Z7, Q5S003, Q5SUV2, Q5T1B0, Q5ZLS8, Q63164, Q66HC0, Q69CM7, Q6AXP3, Q6AYL8, Q6IRN6, Q6NXP0, Q6Q759, Q80X60, Q86WZ0, Q8C1B1, Q8C4J0, Q8C636, Q8CDN1, Q8CDU5, Q8IWF9, Q8N7B9, Q8N7U6, Q8ND61
Diamond homologs: A8J6X7, A9Q751, Q4G0U5, Q8BLA1, Q9Y238
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
40 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 3 |
| Likely pathogenic | 2 |
| Uncertain significance | 4 |
| Likely benign | 8 |
| Benign | 1 |
Top pathogenic / likely-pathogenic (5)
| Variant ID | HGVS | Classification |
|---|---|---|
| 3911905 | CFAP221, 1-BP DUP, NT1641 (rs779457532) | Pathogenic |
| 3911906 | NM_001271049.2(CFAP221):c.1466_1469del (p.Lys489fs) | Pathogenic |
| 3911907 | CFAP221, 18,187-BP DEL, EX15-21 | Pathogenic |
| 4082365 | NM_001271049.2(CFAP221):c.1641dup (p.Asn548fs) | Likely pathogenic |
| 4818927 | GRCh38/hg38 2q14.2(chr2:119624023-119642209)x1 | Likely pathogenic |
SpliceAI
4762 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 2:119544639:A:T | donor_gain | 1.0000 |
| 2:119546084:GGAC:G | acceptor_gain | 1.0000 |
| 2:119546243:G:GT | donor_gain | 1.0000 |
| 2:119546266:ATCAA:A | donor_gain | 1.0000 |
| 2:119546267:TCAA:T | donor_gain | 1.0000 |
| 2:119546268:CAA:C | donor_gain | 1.0000 |
| 2:119546269:AA:A | donor_gain | 1.0000 |
| 2:119546270:AGT:A | donor_loss | 1.0000 |
| 2:119546271:G:GG | donor_gain | 1.0000 |
| 2:119546272:TAAGT:T | donor_loss | 1.0000 |
| 2:119559684:CCCA:C | acceptor_loss | 1.0000 |
| 2:119559685:CCAGC:C | acceptor_loss | 1.0000 |
| 2:119559687:A:AG | acceptor_gain | 1.0000 |
| 2:119559687:AGC:A | acceptor_loss | 1.0000 |
| 2:119559688:G:GA | acceptor_gain | 1.0000 |
| 2:119559688:G:GT | acceptor_loss | 1.0000 |
| 2:119559688:GC:G | acceptor_gain | 1.0000 |
| 2:119559688:GCAT:G | acceptor_gain | 1.0000 |
| 2:119559688:GCATC:G | acceptor_gain | 1.0000 |
| 2:119560025:AGGTA:A | donor_loss | 1.0000 |
| 2:119560026:GGT:G | donor_loss | 1.0000 |
| 2:119560028:T:A | donor_loss | 1.0000 |
| 2:119604668:ATAG:A | acceptor_loss | 1.0000 |
| 2:119604670:A:AC | acceptor_loss | 1.0000 |
| 2:119604670:A:AG | acceptor_gain | 1.0000 |
| 2:119604671:G:GG | acceptor_gain | 1.0000 |
| 2:119604671:GATTA:G | acceptor_gain | 1.0000 |
| 2:119604790:AAG:A | donor_loss | 1.0000 |
| 2:119604791:AGGTA:A | donor_loss | 1.0000 |
| 2:119604792:GG:G | donor_loss | 1.0000 |
AlphaMissense
5574 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 2:119562045:C:A | A153D | 0.991 |
| 2:119562044:G:C | A153P | 0.988 |
| 2:119562033:T:A | V149D | 0.987 |
| 2:119604940:T:A | V326D | 0.987 |
| 2:119559974:T:C | F125S | 0.983 |
| 2:119605228:G:C | A358P | 0.983 |
| 2:119587168:T:C | F193L | 0.982 |
| 2:119587170:T:A | F193L | 0.982 |
| 2:119587170:T:G | F193L | 0.982 |
| 2:119601259:T:C | F225L | 0.982 |
| 2:119601261:T:A | F225L | 0.982 |
| 2:119601261:T:G | F225L | 0.982 |
| 2:119549144:T:C | F67L | 0.981 |
| 2:119549146:T:A | F67L | 0.981 |
| 2:119549146:T:G | F67L | 0.981 |
| 2:119549184:T:C | L80P | 0.980 |
| 2:119559992:G:C | R131P | 0.980 |
| 2:119559700:T:A | N84K | 0.979 |
| 2:119559700:T:G | N84K | 0.979 |
| 2:119560016:T:A | V139D | 0.979 |
| 2:119559752:T:C | F102L | 0.978 |
| 2:119559754:T:A | F102L | 0.978 |
| 2:119559754:T:G | F102L | 0.978 |
| 2:119604933:G:C | A324P | 0.978 |
| 2:119604943:T:C | L327S | 0.978 |
| 2:119560004:A:T | D135V | 0.977 |
| 2:119559968:T:A | V123D | 0.976 |
| 2:119559693:T:C | L82P | 0.975 |
| 2:119601260:T:C | F225S | 0.974 |
| 2:119559973:T:C | F125L | 0.973 |
dbSNP variants (sampled 300 via entrez): RS1000016354 (2:119555468 G>T), RS1000053628 (2:119658331 T>C), RS1000070571 (2:119642222 T>C), RS1000071478 (2:119598541 G>A,T), RS1000074899 (2:119608205 G>C), RS1000087133 (2:119648903 G>C), RS1000128112 (2:119547425 G>C,T), RS1000141535 (2:119619365 C>G), RS1000191671 (2:119627055 T>C), RS1000215574 (2:119620787 T>C), RS1000236963 (2:119606150 C>T), RS1000243808 (2:119626810 G>A,C), RS1000245523 (2:119625283 A>G), RS1000294722 (2:119626420 A>G), RS1000307080 (2:119580465 A>G)
Disease associations
OMIM: gene MIM:618704 | disease phenotypes: MIM:279000, MIM:244400
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| primary ciliary dyskinesia | Supportive | Autosomal dominant |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| primary ciliary dyskinesia | Definitive | AR |
Mondo (2): Young syndrome (MONDO:0010220), primary ciliary dyskinesia (MONDO:0016575)
Orphanet (2): Primary ciliary dyskinesia (Orphanet:244), Young syndrome (Orphanet:3471)
HPO phenotypes
51 total (30 of 51 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000027 | Azoospermia |
| HP:0000119 | Abnormality of the genitourinary system |
| HP:0000238 | Hydrocephalus |
| HP:0000365 | Hearing impairment |
| HP:0000389 | Chronic otitis media |
| HP:0000403 | Recurrent otitis media |
| HP:0000405 | Conductive hearing impairment |
| HP:0000510 | Rod-cone dystrophy |
| HP:0000750 | Delayed speech and language development |
| HP:0000924 | Abnormality of the skeletal system |
| HP:0001217 | Clubbing |
| HP:0001627 | Abnormal heart morphology |
| HP:0001669 | Transposition of the great arteries |
| HP:0001696 | Situs inversus totalis |
| HP:0001719 | Double outlet right ventricle |
| HP:0001742 | Nasal congestion |
| HP:0001746 | Asplenia |
| HP:0001748 | Polysplenia |
| HP:0002011 | Morphological central nervous system abnormality |
| HP:0002110 | Bronchiectasis |
| HP:0002119 | Ventriculomegaly |
| HP:0002257 | Chronic rhinitis |
| HP:0002566 | Intestinal malrotation |
| HP:0002643 | Neonatal respiratory distress |
| HP:0002837 | Recurrent bronchitis |
| HP:0002878 | Respiratory failure |
| HP:0003251 | Male infertility |
| HP:0005301 | Persistent left superior vena cava |
| HP:0005425 | Recurrent sinopulmonary infections |
GWAS associations
2 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST002625_3 | Chronic bronchitis and chronic obstructive pulmonary disease | 3.000000e-07 |
| GCST008103_94 | Bipolar disorder | 2.000000e-06 |
MeSH disease descriptors (3)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D002925 | Ciliary Motility Disorders | C08.200; C09.150; C16.131.077.245.500; C16.320.184.500 |
| D007619 | Kartagener Syndrome | C08.127.384.500; C08.200.531; C08.695.501; C09.150.531; C14.240.400.280.500; C14.280.400.280.500; C16.131.077.245.500.531; C16.131.240.400.280.500; C16.131.740.501; C16.131.810.250.500; C16.320.184.500.531; C16.320.480 |
| C536718 | Young Syndrome (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
15 total (human), top 15 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Benzo(a)pyrene | affects methylation, increases methylation | 2 |
| Tobacco Smoke Pollution | decreases expression | 2 |
| aristolochic acid I | decreases expression | 1 |
| 2,3-pentanedione | decreases expression | 1 |
| benzo(e)pyrene | decreases methylation | 1 |
| ferrous chloride | increases expression | 1 |
| aflatoxin B2 | decreases methylation | 1 |
| Air Pollutants | increases abundance, increases expression | 1 |
| Arsenic | affects methylation | 1 |
| Diacetyl | decreases expression | 1 |
| Diethylhexyl Phthalate | decreases expression | 1 |
| Methapyrilene | decreases methylation | 1 |
| Smoke | increases abundance, increases expression | 1 |
| Cyclosporine | decreases expression | 1 |
| Okadaic Acid | decreases expression | 1 |
Clinical trials (associated diseases)
71 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT02871778 | PHASE2 | COMPLETED | Clearing Lungs With ENaC Inhibition in Primary Ciliary Dyskinesia |
| NCT07318974 | PHASE2 | ACTIVE_NOT_RECRUITING | Melatonin Therapy for Improving ICSI Outcomes in Women With Diminished Ovarian Reserve |
| NCT05737485 | PHASE1 | COMPLETED | Study Evaluating the Safety and Tolerability of RCT1100 in Healthy and PCD Subjects |
| NCT06600425 | PHASE1 | COMPLETED | A Study to Assess the Safety, Tolerability, Ciliary Rescue, and Pharmacodynamics of RCT1100 in Adults With PCD |
| NCT06633757 | PHASE1 | COMPLETED | Study of Inhaled RCT1100 in Adults With PCD Caused by Pathogenic Mutations in the DNAI1 Gene to Measure Mucociliary Clearance |
| NCT04901715 | EARLY_PHASE1 | COMPLETED | Functional Studies of Novel Genes Mutated in Primary Ciliary Dyskinesia II: Genotype to Phenotype |
| NCT00005650 | Not specified | COMPLETED | Genetic Study of Patients With Primary Ciliary Dyskinesia |
| NCT00323167 | Not specified | COMPLETED | Rare Genetic Disorders of the Breathing Airways |
| NCT00368446 | Not specified | COMPLETED | Genetic Disorders of Mucociliary Clearance in Nontuberculous Mycobacterial Lung Disease |
| NCT00450918 | Not specified | COMPLETED | Evaluating Progression of and Diagnostic Tools for Primary Ciliary Dyskinesia in Children and Adolescents |
| NCT00608556 | Not specified | COMPLETED | Dyskinesia, Heterotaxy and Congenital Heart Disease |
| NCT00686309 | Not specified | UNKNOWN | Comparison of On-line and Off-line Measurements of Exhaled Nitric Oxide (NO) |
| NCT00722878 | Not specified | COMPLETED | Long-term Lung Function and Disease Progression in Children With Early Onset Primary Ciliary Dyskinesia Lung Disease |
| NCT00739817 | Not specified | UNKNOWN | Screening for Primary Ciliary Dyskinesia Using Nasal Nitric Oxide |
| NCT00783887 | Not specified | COMPLETED | Diagnosis of Primary Ciliary Dyskinesia |
| NCT00807482 | Not specified | RECRUITING | Pathogenesis of Primary Ciliary Dyskinesia (PCD) Lung Disease |
| NCT01070914 | Not specified | UNKNOWN | Early Detection and Characterization of Primary Ciliary Dyskinesia |
| NCT01155115 | Not specified | COMPLETED | Inflammatory and Microbiologic Markers in Sputum: Comparing Cystic Fibrosis With Primary Ciliary Dyskinesia |
| NCT01246258 | Not specified | COMPLETED | Otolith Function in Patients With Primary Ciliary Dyskinesia |
| NCT01929356 | Not specified | RECRUITING | Chest Physiotherapy and Lung Function in Primary Ciliary Dyskinesia |
| NCT02389049 | Not specified | COMPLETED | Genetics of Primary Ciliary Dyskinesia |
| NCT02419365 | Not specified | RECRUITING | International Primary Ciliary Dyskinesia (PCD) Registry |
| NCT02699177 | Not specified | UNKNOWN | In Vivo Measurements of Nasal Ciliary Beat Frequency by Using Interferometry |
| NCT02704455 | Not specified | NOT_YET_RECRUITING | Registry Study on Primary Ciliary Dyskinesia in Chinese Children |
| NCT03271840 | Not specified | COMPLETED | Registry for Primary Ciliary Dyskinesia |
| NCT03279965 | Not specified | UNKNOWN | MRI in Cystic Fibrosis and Primary Ciliary Dyskinesia |
| NCT03320382 | Not specified | UNKNOWN | Multiple Breath Washout, a Clinimetric Dataset |
| NCT03370029 | Not specified | COMPLETED | Respiratory Muscle Strength, Exercise Capacity and Physical Activity Levels in Children Primary Ciliary Dyskinesia |
| NCT03494894 | Not specified | COMPLETED | Bacteriological Link Between Upper and Lower Airways in Cystic Fibrosis and Primary Ciliary Dyskinesia |
| NCT03517865 | Not specified | ACTIVE_NOT_RECRUITING | International Primary Ciliary Dyskinesia Cohort |
| NCT03606200 | Not specified | RECRUITING | Swiss Primary Ciliary Dyskinesia Registry |
| NCT03704207 | Not specified | RECRUITING | Utility of PCD Diagnostics to Improve Clinical Care |
| NCT03704896 | Not specified | UNKNOWN | PRospective Observational Multicentre Study on VAriability of Lung Function in Stable PCD Patients |
| NCT03801395 | Not specified | COMPLETED | PCD New Gene Discovery |
| NCT03809091 | Not specified | UNKNOWN | WGS of Korean Idiopathic Bronchiectasis |
| NCT03832491 | Not specified | COMPLETED | Effect of Game Based Approach on Oxygenation, Functional Capacity and Quality of Life in Primary Ciliary Dyskinesia |
| NCT04161313 | Not specified | COMPLETED | Respiratory Function, Exercise Capacity and Peripheral Muscle Strength Among Patients With CF, PCD and Healthy Children |
| NCT04476433 | Not specified | COMPLETED | Intervention in Chronic Pediatric Patients and Their Families. |
| NCT04489472 | Not specified | UNKNOWN | The Effect of a Dietary Supplement Rich in Nitric Oxide in Patients Diagnosed With Primary Ciliary Dyskinesia. |
| NCT04602481 | Not specified | RECRUITING | Living With Primary Ciliary Dyskinesia (Living With PCD) |
Related Atlas pages
- Associated diseases: primary ciliary dyskinesia
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): chronic bronchitis, primary ciliary dyskinesia, Young syndrome