CHFR-DT

Summary

CHFR-DT (CHFR divergent transcript, HGNC:55658) is a long non-coding RNA gene on chromosome 12q24.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55658
Approved symbol	CHFR-DT
Name	CHFR divergent transcript
Location	12q24.33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000236617
Ensembl biotype	lncRNA
Entrez	101928530
RNAcentral	URS000075C6E7 — lncRNA, 543 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000424075

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000424075 — 2 exons

Exon	Start	End
ENSE00004258276	132887706	132887932
ENSE00004258277	132888120	132888584

Expression profiles

Bgee: expression breadth ubiquitous, 127 present calls, max score 84.75.

Top tissues by expression

127 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.75	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	80.82	silver quality
sural nerve	UBERON:0015488	77.82	gold quality
islet of Langerhans	UBERON:0000006	70.87	gold quality
cortical plate	UBERON:0005343	69.84	gold quality
bone marrow cell	CL:0002092	67.54	silver quality
ganglionic eminence	UBERON:0004023	65.82	gold quality
pancreas	UBERON:0001264	65.08	gold quality
muscle tissue	UBERON:0002385	63.37	gold quality
monocyte	CL:0000576	62.96	gold quality
left testis	UBERON:0004533	62.13	gold quality
testis	UBERON:0000473	62.00	gold quality
body of pancreas	UBERON:0001150	61.88	gold quality
granulocyte	CL:0000094	61.78	gold quality
adenohypophysis	UBERON:0002196	61.40	gold quality
right testis	UBERON:0004534	61.14	gold quality
pituitary gland	UBERON:0000007	60.90	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	60.84	gold quality
smooth muscle tissue	UBERON:0001135	59.78	gold quality
bone marrow	UBERON:0002371	59.06	gold quality
lymph node	UBERON:0000029	58.84	gold quality
right adrenal gland	UBERON:0001233	58.80	gold quality
skeletal muscle tissue	UBERON:0001134	58.62	gold quality
adult mammalian kidney	UBERON:0000082	58.46	gold quality
prefrontal cortex	UBERON:0000451	58.05	gold quality
tonsil	UBERON:0002372	58.04	gold quality
mucosa of transverse colon	UBERON:0004991	57.82	gold quality
kidney	UBERON:0002113	57.73	gold quality
liver	UBERON:0002107	57.69	gold quality
right adrenal gland cortex	UBERON:0035827	57.64	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.76

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.