CHIC2-DT

Summary

CHIC2-DT (CHIC2 divergent transcript, HGNC:58788) is a long non-coding RNA gene on chromosome 4q12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58788
Approved symbol	CHIC2-DT
Name	CHIC2 divergent transcript
Location	4q12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000287534
Ensembl biotype	lncRNA
Entrez	144093378

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000654316

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000654316 — 2 exons

Exon	Start	End
ENSE00003858272	54065239	54066848
ENSE00003865562	54077240	54078454

Expression profiles

Bgee: expression breadth broad, 66 present calls, max score 85.90.

Top tissues by expression

66 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.90	gold quality
lymph node	UBERON:0000029	51.11	gold quality
left testis	UBERON:0004533	50.70	gold quality
testis	UBERON:0000473	50.49	gold quality
right testis	UBERON:0004534	50.45	gold quality
hindlimb stylopod muscle	UBERON:0004252	49.85	silver quality
blood	UBERON:0000178	49.38	silver quality
leukocyte	CL:0000738	49.36	silver quality
bone marrow	UBERON:0002371	48.68	silver quality
liver	UBERON:0002107	48.63	silver quality
calcaneal tendon	UBERON:0003701	48.33	silver quality
muscle of leg	UBERON:0001383	47.78	silver quality
placenta	UBERON:0001987	47.34	gold quality
islet of Langerhans	UBERON:0000006	47.14	silver quality
vermiform appendix	UBERON:0001154	47.09	silver quality
monocyte	CL:0000576	46.94	silver quality
prefrontal cortex	UBERON:0000451	46.80	silver quality
gastrocnemius	UBERON:0001388	46.76	gold quality
colon	UBERON:0001155	45.84	silver quality
right lobe of liver	UBERON:0001114	45.82	silver quality
tonsil	UBERON:0002372	45.59	gold quality
multicellular organism	UBERON:0000468	44.29	gold quality
small intestine	UBERON:0002108	42.77	silver quality
heart left ventricle	UBERON:0002084	42.63	gold quality
gall bladder	UBERON:0002110	42.08	silver quality
left coronary artery	UBERON:0001626	41.86	silver quality
amygdala	UBERON:0001876	41.86	silver quality
left adrenal gland cortex	UBERON:0035825	41.78	silver quality
heart	UBERON:0000948	41.70	gold quality
lower esophagus muscularis layer	UBERON:0035833	41.52	silver quality

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.