CHN2-AS1

Summary

CHN2-AS1 (CHN2 antisense RNA 1, HGNC:40149) is a long non-coding RNA gene on chromosome 7p14.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40149
Approved symbol	CHN2-AS1
Name	CHN2 antisense RNA 1
Location	7p14.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000235669
Ensembl biotype	lncRNA
Entrez	102724484
RNAcentral	URS000075A726 — lncRNA, 1311 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000446246

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000446246 — 3 exons

Exon	Start	End
ENSE00001629685	29199540	29200123
ENSE00001724481	29200692	29200747
ENSE00001754310	29208813	29208970

Expression profiles

Bgee: expression breadth broad, 98 present calls, max score 93.77.

Top tissues by expression

98 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	93.77	gold quality
sural nerve	UBERON:0015488	82.27	gold quality
tonsil	UBERON:0002372	75.90	gold quality
colonic epithelium	UBERON:0000397	74.45	gold quality
corpus callosum	UBERON:0002336	74.01	gold quality
bone marrow cell	CL:0002092	73.99	silver quality
adrenal tissue	UBERON:0018303	68.75	gold quality
skeletal muscle tissue	UBERON:0001134	66.84	silver quality
liver	UBERON:0002107	63.63	gold quality
thoracic mammary gland	UBERON:0005200	60.95	silver quality
bone marrow	UBERON:0002371	60.18	silver quality
hindlimb stylopod muscle	UBERON:0004252	59.83	gold quality
cerebellum	UBERON:0002037	59.61	gold quality
cerebellar cortex	UBERON:0002129	59.57	gold quality
cerebellar hemisphere	UBERON:0002245	59.41	gold quality
right hemisphere of cerebellum	UBERON:0014890	59.20	gold quality
cortex of kidney	UBERON:0001225	57.17	gold quality
monocyte	CL:0000576	57.08	gold quality
calcaneal tendon	UBERON:0003701	55.62	gold quality
brain	UBERON:0000955	55.55	gold quality
blood	UBERON:0000178	55.35	silver quality
right lobe of liver	UBERON:0001114	55.35	gold quality
urinary bladder	UBERON:0001255	55.33	silver quality
adrenal gland	UBERON:0002369	54.96	gold quality
kidney	UBERON:0002113	54.87	gold quality
placenta	UBERON:0001987	52.50	gold quality
lung	UBERON:0002048	52.50	silver quality
uterine cervix	UBERON:0000002	52.16	silver quality
myometrium	UBERON:0001296	51.34	gold quality
islet of Langerhans	UBERON:0000006	50.98	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.98

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.