CLCN7-AS1

Summary

CLCN7-AS1 (CLCN7 antisense RNA 1, HGNC:58480) is a long non-coding RNA gene on chromosome 16p13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58480
Approved symbol	CLCN7-AS1
Name	CLCN7 antisense RNA 1
Location	16p13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000260051
Ensembl biotype	lncRNA
Entrez	141974274

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000563610

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000563610 — 2 exons

Exon	Start	End
ENSE00002583234	1451760	1451942
ENSE00002612055	1452267	1452653

Expression profiles

Bgee: expression breadth ubiquitous, 131 present calls, max score 83.19.

Top tissues by expression

131 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
metanephros cortex	UBERON:0010533	83.19	gold quality
granulocyte	CL:0000094	82.14	gold quality
right hemisphere of cerebellum	UBERON:0014890	81.49	gold quality
right adrenal gland cortex	UBERON:0035827	81.46	gold quality
right lobe of thyroid gland	UBERON:0001119	81.31	gold quality
spleen	UBERON:0002106	80.83	gold quality
right adrenal gland	UBERON:0001233	80.77	gold quality
left adrenal gland cortex	UBERON:0035825	80.13	gold quality
thyroid gland	UBERON:0002046	80.12	gold quality
left lobe of thyroid gland	UBERON:0001120	80.11	gold quality
pituitary gland	UBERON:0000007	80.10	gold quality
left adrenal gland	UBERON:0001234	79.77	gold quality
cerebellar hemisphere	UBERON:0002245	79.15	gold quality
lymph node	UBERON:0000029	79.08	gold quality
cerebellum	UBERON:0002037	79.02	gold quality
cerebellar cortex	UBERON:0002129	78.99	gold quality
bone marrow	UBERON:0002371	78.98	gold quality
body of uterus	UBERON:0009853	78.87	gold quality
mucosa of stomach	UBERON:0001199	78.77	gold quality
adrenal gland	UBERON:0002369	78.72	gold quality
skin of leg	UBERON:0001511	78.24	gold quality
upper lobe of left lung	UBERON:0008952	78.09	gold quality
endocervix	UBERON:0000458	78.04	gold quality
small intestine Peyer’s patch	UBERON:0003454	77.79	gold quality
zone of skin	UBERON:0000014	77.69	gold quality
apex of heart	UBERON:0002098	77.48	gold quality
right ovary	UBERON:0002118	77.43	gold quality
subcutaneous adipose tissue	UBERON:0002190	77.19	gold quality
small intestine	UBERON:0002108	77.17	gold quality
monocyte	CL:0000576	77.09	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.77

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.