CLDND1-AS1

Summary

CLDND1-AS1 (CLDND1 antisense RNA 1, HGNC:58245) is a long non-coding RNA gene on chromosome 3q11.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58245
Approved symbol	CLDND1-AS1
Name	CLDND1 antisense RNA 1
Location	3q11.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000248839
Ensembl biotype	lncRNA
Entrez	139355203
RNAcentral	URS0002A1B621 — lncRNA, 947 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000502999

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000502999 — 2 exons

Exon	Start	End
ENSE00004157560	98525211	98525893
ENSE00004157561	98522570	98522833

Expression profiles

Bgee: expression breadth ubiquitous, 109 present calls, max score 73.02.

Top tissues by expression

109 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow cell	CL:0002092	73.02	gold quality
colonic epithelium	UBERON:0000397	70.90	gold quality
skeletal muscle tissue	UBERON:0001134	69.87	gold quality
bone marrow	UBERON:0002371	67.88	gold quality
ganglionic eminence	UBERON:0004023	67.76	gold quality
prefrontal cortex	UBERON:0000451	64.24	gold quality
primary visual cortex	UBERON:0002436	63.67	gold quality
cortex of kidney	UBERON:0001225	61.89	gold quality
hindlimb stylopod muscle	UBERON:0004252	61.52	gold quality
vermiform appendix	UBERON:0001154	61.25	gold quality
gall bladder	UBERON:0002110	60.71	gold quality
liver	UBERON:0002107	58.80	gold quality
superior frontal gyrus	UBERON:0002661	58.71	gold quality
tonsil	UBERON:0002372	58.49	gold quality
blood	UBERON:0000178	58.18	gold quality
urinary bladder	UBERON:0001255	57.96	gold quality
frontal cortex	UBERON:0001870	57.64	gold quality
duodenum	UBERON:0002114	55.89	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	55.71	gold quality
muscle of leg	UBERON:0001383	55.42	gold quality
placenta	UBERON:0001987	54.53	gold quality
gastrocnemius	UBERON:0001388	54.50	gold quality
pancreas	UBERON:0001264	53.41	gold quality
kidney	UBERON:0002113	53.14	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	52.91	gold quality
right lobe of liver	UBERON:0001114	52.61	gold quality
substantia nigra	UBERON:0002038	52.28	gold quality
Ammon’s horn	UBERON:0001954	52.17	gold quality
heart left ventricle	UBERON:0002084	51.83	gold quality
uterine cervix	UBERON:0000002	51.73	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.20

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.