CLNK-AS1

Summary

CLNK-AS1 (CLNK antisense RNA 1, HGNC:58732) is a long non-coding RNA gene on chromosome 4p16.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58732
Approved symbol	CLNK-AS1
Name	CLNK antisense RNA 1
Location	4p16.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000287154
Ensembl biotype	lncRNA
Entrez	105374482

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000663264

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000663264 — 3 exons

Exon	Start	End
ENSE00003859366	10530134	10530261
ENSE00003879153	10456745	10456840
ENSE00003879986	10530662	10531022

Expression profiles

Bgee: expression breadth broad, 97 present calls, max score 84.14.

Top tissues by expression

97 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.14	silver quality
hindlimb stylopod muscle	UBERON:0004252	67.64	gold quality
colonic epithelium	UBERON:0000397	63.78	silver quality
left testis	UBERON:0004533	61.71	gold quality
testis	UBERON:0000473	61.11	gold quality
cortex of kidney	UBERON:0001225	60.95	gold quality
right testis	UBERON:0004534	59.99	gold quality
adult mammalian kidney	UBERON:0000082	59.89	gold quality
kidney	UBERON:0002113	59.86	gold quality
lymph node	UBERON:0000029	58.29	gold quality
vermiform appendix	UBERON:0001154	55.93	gold quality
metanephros cortex	UBERON:0010533	54.37	gold quality
monocyte	CL:0000576	53.69	gold quality
liver	UBERON:0002107	52.86	gold quality
blood	UBERON:0000178	52.18	silver quality
calcaneal tendon	UBERON:0003701	52.04	silver quality
bone marrow	UBERON:0002371	51.95	silver quality
prefrontal cortex	UBERON:0000451	51.40	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	50.96	gold quality
primary visual cortex	UBERON:0002436	50.52	gold quality
gall bladder	UBERON:0002110	50.44	gold quality
right lobe of liver	UBERON:0001114	48.87	silver quality
thoracic mammary gland	UBERON:0005200	48.84	gold quality
tonsil	UBERON:0002372	48.36	gold quality
left adrenal gland cortex	UBERON:0035825	47.95	gold quality
muscle of leg	UBERON:0001383	47.64	gold quality
multicellular organism	UBERON:0000468	46.97	gold quality
right adrenal gland cortex	UBERON:0035827	46.61	gold quality
right lobe of thyroid gland	UBERON:0001119	46.48	silver quality
pituitary gland	UBERON:0000007	46.38	gold quality

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.