CLNK-AS3

Summary

CLNK-AS3 (CLNK antisense RNA 3, HGNC:58734) is a long non-coding RNA gene on chromosome 4p16.1.

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58734
Approved symbol	CLNK-AS3
Name	CLNK antisense RNA 3
Location	4p16.1
Locus type	RNA, long non-coding
Status	Approved
Entrez	105374480

Gene structure

Transcript identifiers

Ensembl transcripts: 0

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

None — 0 exons

Expression profiles

Top tissues by expression

0 total, by Bgee expression score (0-100, higher = more expressed):

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Protein identifiers

Canonical reviewed UniProt: None (reviewed: )

All UniProt accessions (0):

RefSeq proteins (0): (*=MANE)

Domains & families (InterPro)

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

Function

Pathways and Gene Ontology

Reactome pathways

0 pathways

MSigDB gene sets: 0 (showing top):

GO Biological Process (0):

GO Molecular Function (0):

GO Cellular Component (0):

Protein interactions and networks

STRING

0 interactions, top by confidence (×1000):

IntAct

0 interactions, top by confidence:

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

0 variants total. Per-class counts are floors (≥ shown; pagination cap):

Classification	Count (floor)
Pathogenic	0
Likely pathogenic	0
Uncertain significance	0
Likely benign	0
Benign	0

Top pathogenic / likely-pathogenic (0)

SpliceAI

0 predictions. Top by Δscore:

AlphaMissense

0 scored. Top likely-pathogenic:

dbSNP variants (sampled 300 via entrez): RS1000047955 (4:10621346 T>C), RS1000516522 (4:10629099 C>G,T), RS1000905974 (4:10629049 C>T), RS1000974822 (4:10623210 C>A), RS1000990469 (4:10623011 T>C), RS1001042746 (4:10622633 T>C), RS1001325359 (4:10628713 G>GCT), RS1001581780 (4:10626328 A>C,G,T), RS1001640576 (4:10625875 C>T), RS1001944820 (4:10624785 G>A), RS1001988308 (4:10626142 C>T), RS1002008010 (4:10626115 C>T), RS1002377853 (4:10624553 A>G), RS1002607601 (4:10627362 C>G), RS1002694567 (4:10621416 A>G)

Disease associations

OMIM: gene `` | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

0 associations (top):

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 0 entries

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.