CLNK-DT

Summary

CLNK-DT (CLNK divergent transcript, HGNC:58735) is a long non-coding RNA gene on chromosome 4p16.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58735
Approved symbol	CLNK-DT
Name	CLNK divergent transcript
Location	4p16.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000249334
Ensembl biotype	lncRNA
Entrez	143433679

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000505494, ENST00000720925, ENST00000720926

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000505494 — 3 exons

Exon	Start	End
ENSE00002033915	10685003	10685061
ENSE00002056218	10692065	10692106
ENSE00002078147	10697123	10697661

Expression profiles

Bgee: expression breadth broad, 62 present calls, max score 63.41.

Top tissues by expression

62 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
hindlimb stylopod muscle	UBERON:0004252	63.41	gold quality
lymph node	UBERON:0000029	61.06	gold quality
urinary bladder	UBERON:0001255	56.73	gold quality
tonsil	UBERON:0002372	55.79	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	53.55	gold quality
monocyte	CL:0000576	53.02	silver quality
liver	UBERON:0002107	52.99	gold quality
duodenum	UBERON:0002114	52.95	gold quality
placenta	UBERON:0001987	52.89	silver quality
kidney	UBERON:0002113	52.68	gold quality
gall bladder	UBERON:0002110	52.53	gold quality
vermiform appendix	UBERON:0001154	52.35	gold quality
cortex of kidney	UBERON:0001225	52.15	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	50.83	gold quality
endometrium	UBERON:0001295	50.35	gold quality
blood	UBERON:0000178	50.24	gold quality
upper lobe of left lung	UBERON:0008952	50.09	gold quality
prefrontal cortex	UBERON:0000451	49.94	gold quality
gastrocnemius	UBERON:0001388	47.93	gold quality
right adrenal gland cortex	UBERON:0035827	46.92	gold quality
lung	UBERON:0002048	46.86	gold quality
adult mammalian kidney	UBERON:0000082	46.28	gold quality
body of pancreas	UBERON:0001150	45.68	silver quality
multicellular organism	UBERON:0000468	45.67	gold quality
muscle layer of sigmoid colon	UBERON:0035805	45.62	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	45.59	gold quality
rectum	UBERON:0001052	44.42	gold quality
tibial artery	UBERON:0007610	44.05	silver quality
smooth muscle tissue	UBERON:0001135	43.58	gold quality
skin of leg	UBERON:0001511	43.41	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.30

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.