CLPTM1L-DT

Summary

CLPTM1L-DT (CLPTM1L divergent transcript, HGNC:58991) is a long non-coding RNA gene on chromosome 5p15.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58991
Approved symbol	CLPTM1L-DT
Name	CLPTM1L divergent transcript
Location	5p15.33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000286388
Ensembl biotype	lncRNA
Entrez	144667546

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000656081

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000656081 — 2 exons

Exon	Start	End
ENSE00003855161	1345197	1347452
ENSE00003868647	1349741	1350786

Expression profiles

Bgee: expression breadth ubiquitous, 229 present calls, max score 82.67.

Top tissues by expression

245 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
pancreatic ductal cell	CL:0002079	82.67	silver quality
Brodmann (1909) area 23	UBERON:0013554	77.04	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	76.67	gold quality
left ventricle myocardium	UBERON:0006566	75.79	silver quality
middle temporal gyrus	UBERON:0002771	75.46	gold quality
vastus lateralis	UBERON:0001379	75.43	gold quality
quadriceps femoris	UBERON:0001377	75.16	silver quality
epithelial cell of pancreas	CL:0000083	75.03	silver quality
endothelial cell	CL:0000115	74.69	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	73.88	gold quality
kidney epithelium	UBERON:0004819	73.85	silver quality
primary visual cortex	UBERON:0002436	73.78	gold quality
sperm	CL:0000019	73.48	silver quality
prefrontal cortex	UBERON:0000451	73.47	gold quality
spinal cord	UBERON:0002240	73.36	gold quality
superior frontal gyrus	UBERON:0002661	73.29	gold quality
ventricular zone	UBERON:0003053	73.21	gold quality
apex of heart	UBERON:0002098	73.18	gold quality
gastrocnemius	UBERON:0001388	73.14	gold quality
muscle of leg	UBERON:0001383	73.01	gold quality
entorhinal cortex	UBERON:0002728	72.89	gold quality
upper arm skin	UBERON:0004263	72.89	gold quality
Ammon’s horn	UBERON:0001954	72.80	gold quality
postcentral gyrus	UBERON:0002581	72.78	gold quality
frontal cortex	UBERON:0001870	72.29	gold quality
cerebral cortex	UBERON:0000956	72.08	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	72.08	gold quality
neocortex	UBERON:0001950	71.96	gold quality
occipital lobe	UBERON:0002021	71.90	gold quality
esophagus squamous epithelium	UBERON:0006920	71.90	gold quality

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.