CLSPN-AS1

Summary

CLSPN-AS1 (CLSPN antisense RNA 1, HGNC:40896) is a long non-coding RNA gene on chromosome 1p34.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40896
Approved symbol	CLSPN-AS1
Name	CLSPN antisense RNA 1
Location	1p34.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000232335
Ensembl biotype	lncRNA
Entrez	139355217
RNAcentral	URS000022331C — lncRNA, 539 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000373226

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000373226 — 2 exons

Exon	Start	End
ENSE00001612676	35743163	35743576
ENSE00001744717	35739389	35739513

Expression profiles

Bgee: expression breadth broad, 89 present calls, max score 83.08.

Top tissues by expression

89 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.08	gold quality
bone marrow cell	CL:0002092	76.47	gold quality
bone marrow	UBERON:0002371	67.79	gold quality
muscle tissue	UBERON:0002385	61.95	silver quality
tonsil	UBERON:0002372	59.77	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	58.17	gold quality
placenta	UBERON:0001987	57.14	gold quality
prefrontal cortex	UBERON:0000451	56.91	gold quality
stromal cell of endometrium	CL:0002255	55.82	gold quality
endometrium	UBERON:0001295	54.15	gold quality
lymph node	UBERON:0000029	53.25	gold quality
liver	UBERON:0002107	52.38	silver quality
islet of Langerhans	UBERON:0000006	51.59	gold quality
blood	UBERON:0000178	50.84	gold quality
kidney	UBERON:0002113	50.55	gold quality
monocyte	CL:0000576	50.21	silver quality
gastrocnemius	UBERON:0001388	48.06	gold quality
cerebellar hemisphere	UBERON:0002245	47.40	silver quality
heart left ventricle	UBERON:0002084	47.24	gold quality
frontal cortex	UBERON:0001870	46.54	gold quality
uterine cervix	UBERON:0000002	46.03	silver quality
tibial artery	UBERON:0007610	45.99	gold quality
body of pancreas	UBERON:0001150	45.80	silver quality
right lobe of liver	UBERON:0001114	45.63	silver quality
Brodmann (1909) area 9	UBERON:0013540	45.38	gold quality
heart	UBERON:0000948	45.34	silver quality
Ammon’s horn	UBERON:0001954	44.40	gold quality
lung	UBERON:0002048	44.15	gold quality
body of stomach	UBERON:0001161	44.12	gold quality
stomach	UBERON:0000945	44.08	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.65

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.