CLSTN2-AS1

Summary

CLSTN2-AS1 (CLSTN2 antisense RNA 1, HGNC:49095) is a long non-coding RNA gene on chromosome 3q23.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:49095
Approved symbol	CLSTN2-AS1
Name	CLSTN2 antisense RNA 1
Location	3q23
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000250433
Ensembl biotype	lncRNA
Entrez	101927808
RNAcentral	URS000075E44A — lncRNA, 2726 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 10 — 10 lncRNA

ENST00000513309, ENST00000816745, ENST00000816746, ENST00000816747, ENST00000816748, ENST00000816749, ENST00000816750, ENST00000816751, ENST00000816752, ENST00000816753

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000513309 — 2 exons

Exon	Start	End
ENSE00002019285	140506652	140508789
ENSE00002026539	140505611	140506165

Expression profiles

Bgee: expression breadth broad, 41 present calls, max score 62.34.

Top tissues by expression

174 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
tibialis anterior	UBERON:0001385	62.34	silver quality
ileal mucosa	UBERON:0000331	61.96	silver quality
calcaneal tendon	UBERON:0003701	60.16	gold quality
hindlimb stylopod muscle	UBERON:0004252	59.20	silver quality
pancreatic ductal cell	CL:0002079	57.59	silver quality
muscle of leg	UBERON:0001383	55.17	gold quality
islet of Langerhans	UBERON:0000006	54.79	gold quality
epithelial cell of pancreas	CL:0000083	54.36	gold quality
cardiac muscle of right atrium	UBERON:0003379	54.34	gold quality
deltoid	UBERON:0001476	54.28	gold quality
left ventricle myocardium	UBERON:0006566	54.23	gold quality
kidney epithelium	UBERON:0004819	53.93	gold quality
upper arm skin	UBERON:0004263	53.52	gold quality
tendon	UBERON:0000043	52.59	gold quality
myocardium	UBERON:0002349	50.25	gold quality
skin of hip	UBERON:0001554	48.90	silver quality
gastrocnemius	UBERON:0001388	48.42	silver quality
pancreas	UBERON:0001264	47.67	gold quality
right uterine tube	UBERON:0001302	47.50	gold quality
quadriceps femoris	UBERON:0001377	47.44	gold quality
upper leg skin	UBERON:0004262	47.08	silver quality
nasal cavity epithelium	UBERON:0005384	47.03	gold quality
metanephros	UBERON:0000081	46.07	gold quality
buccal mucosa cell	CL:0002336	45.97	gold quality
skeletal muscle tissue	UBERON:0001134	45.83	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	45.42	silver quality
vastus lateralis	UBERON:0001379	45.40	gold quality
adult mammalian kidney	UBERON:0000082	45.30	gold quality
omental fat pad	UBERON:0010414	44.83	gold quality
peritoneum	UBERON:0002358	44.79	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.13

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.