CMTM2-AS1

Summary

CMTM2-AS1 (CMTM2 antisense RNA 1, HGNC:58533) is a long non-coding RNA gene on chromosome 16q21.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58533
Approved symbol	CMTM2-AS1
Name	CMTM2 antisense RNA 1
Location	16q21
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000260650
Ensembl biotype	lncRNA
Entrez	142592809

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000568430

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000568430 — 2 exons

Exon	Start	End
ENSE00002617668	66580425	66580716
ENSE00002622425	66579983	66580245

Expression profiles

Bgee: expression breadth ubiquitous, 114 present calls, max score 88.72.

Top tissues by expression

114 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	88.72	gold quality
ventricular zone	UBERON:0003053	68.81	gold quality
skeletal muscle tissue	UBERON:0001134	60.29	gold quality
blood	UBERON:0000178	60.18	gold quality
monocyte	CL:0000576	58.53	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	57.56	gold quality
cortex of kidney	UBERON:0001225	57.13	gold quality
prefrontal cortex	UBERON:0000451	54.74	gold quality
left lobe of thyroid gland	UBERON:0001120	54.22	gold quality
thyroid gland	UBERON:0002046	53.81	gold quality
right uterine tube	UBERON:0001302	53.04	gold quality
islet of Langerhans	UBERON:0000006	52.73	gold quality
kidney	UBERON:0002113	52.67	gold quality
testis	UBERON:0000473	52.53	gold quality
right testis	UBERON:0004534	52.43	gold quality
placenta	UBERON:0001987	52.21	gold quality
hindlimb stylopod muscle	UBERON:0004252	52.10	gold quality
left testis	UBERON:0004533	52.04	gold quality
right lobe of thyroid gland	UBERON:0001119	51.91	gold quality
body of stomach	UBERON:0001161	51.91	gold quality
stomach	UBERON:0000945	51.60	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	51.12	gold quality
adult mammalian kidney	UBERON:0000082	51.03	gold quality
pancreas	UBERON:0001264	50.66	gold quality
fundus of stomach	UBERON:0001160	50.54	gold quality
liver	UBERON:0002107	50.28	silver quality
superior frontal gyrus	UBERON:0002661	50.27	gold quality
body of pancreas	UBERON:0001150	49.93	gold quality
muscle of leg	UBERON:0001383	49.89	gold quality
tonsil	UBERON:0002372	49.76	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.52

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.