CNR1
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Also known as CB1K5CB-RCB1CANN6CB1A
Summary
CNR1 (cannabinoid receptor 1, HGNC:2159) is a protein-coding gene on chromosome 6q15, encoding Cannabinoid receptor 1 (P21554). G-protein coupled receptor for endogenous cannabinoids (eCBs), including N-arachidonoylethanolamide (also called anandamide or AEA) and 2-arachidonoylglycerol (2-AG), as well as phytocannabinoids, such as delta(9)-tetrahydrocannabinol (THC).
This gene encodes one of two cannabinoid receptors. The cannabinoids, principally delta-9-tetrahydrocannabinol and synthetic analogs, are psychoactive ingredients of marijuana. The cannabinoid receptors are members of the guanine-nucleotide-binding protein (G-protein) coupled receptor family, which inhibit adenylate cyclase activity in a dose-dependent, stereoselective and pertussis toxin-sensitive manner. The two receptors have been found to be involved in the cannabinoid-induced CNS effects (including alterations in mood and cognition) experienced by users of marijuana. Multiple transcript variants encoding two different protein isoforms have been described for this gene.
Source: NCBI Gene 1268 — RefSeq curated summary.
At a glance
- GWAS associations: 2
- Clinical variants (ClinVar): 53 total
- Druggable target: yes — 110 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_016083
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:2159 |
| Approved symbol | CNR1 |
| Name | cannabinoid receptor 1 |
| Location | 6q15 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | CB1K5, CB-R, CB1, CANN6, CB1A |
| Ensembl gene | ENSG00000118432 |
| Ensembl biotype | protein_coding |
| OMIM | 114610 |
| Entrez | 1268 |
Gene structure
Transcript identifiers
Ensembl transcripts: 19 — 19 protein_coding
ENST00000362094, ENST00000369499, ENST00000369501, ENST00000428600, ENST00000468898, ENST00000549890, ENST00000551417, ENST00000882404, ENST00000882405, ENST00000882406, ENST00000882407, ENST00000882408, ENST00000882409, ENST00000882410, ENST00000882411, ENST00000918489, ENST00000918490, ENST00000918491, ENST00000951387
RefSeq mRNA: 17 — MANE Select: NM_016083
NM_001160226, NM_001160258, NM_001160259, NM_001365869, NM_001365870, NM_001365872, NM_001365874, NM_001370545, NM_001370546, NM_001370547, NM_001424094, NM_001424095, NM_001424096, NM_001424097, NM_001424098, NM_016083, NM_033181
CCDS: CCDS5015, CCDS5016
Canonical transcript exons
ENST00000369501 — 2 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001450191 | 88139864 | 88145337 |
| ENSE00002407758 | 88165803 | 88166347 |
Expression profiles
Bgee: expression breadth ubiquitous, 221 present calls, max score 99.15.
FANTOM5 (CAGE): breadth broad, TPM avg 4.2220 / max 178.9348, expressed in 517 samples.
FANTOM5 promoters (7 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 74645 | 2.5160 | 336 |
| 74644 | 1.1119 | 380 |
| 74646 | 0.3276 | 85 |
| 74643 | 0.1310 | 73 |
| 74642 | 0.0538 | 20 |
| 74641 | 0.0449 | 27 |
| 74647 | 0.0367 | 14 |
Top tissues by expression
288 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| ganglionic eminence | UBERON:0004023 | 99.15 | gold quality |
| ventricular zone | UBERON:0003053 | 95.84 | gold quality |
| decidua | UBERON:0002450 | 95.48 | gold quality |
| cerebellar vermis | UBERON:0004720 | 94.09 | gold quality |
| paraflocculus | UBERON:0005351 | 93.49 | gold quality |
| cortical plate | UBERON:0005343 | 91.86 | gold quality |
| frontal pole | UBERON:0002795 | 91.67 | gold quality |
| CA1 field of hippocampus | UBERON:0003881 | 90.30 | gold quality |
| Brodmann (1909) area 10 | UBERON:0013541 | 90.15 | gold quality |
| Brodmann (1909) area 23 | UBERON:0013554 | 89.59 | gold quality |
| endothelial cell | CL:0000115 | 89.08 | gold quality |
| middle frontal gyrus | UBERON:0002702 | 88.89 | gold quality |
| pericardium | UBERON:0002407 | 88.76 | gold quality |
| middle temporal gyrus | UBERON:0002771 | 88.28 | gold quality |
| cerebellum | UBERON:0002037 | 87.60 | gold quality |
| prefrontal cortex | UBERON:0000451 | 87.52 | gold quality |
| superior frontal gyrus | UBERON:0002661 | 87.47 | gold quality |
| orbitofrontal cortex | UBERON:0004167 | 87.31 | gold quality |
| cerebellar cortex | UBERON:0002129 | 87.26 | gold quality |
| pituitary gland | UBERON:0000007 | 87.18 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 87.05 | gold quality |
| adenohypophysis | UBERON:0002196 | 86.92 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 86.86 | gold quality |
| omental fat pad | UBERON:0010414 | 86.69 | gold quality |
| peritoneum | UBERON:0002358 | 86.56 | gold quality |
| frontal cortex | UBERON:0001870 | 86.29 | gold quality |
| neocortex | UBERON:0001950 | 86.28 | gold quality |
| entorhinal cortex | UBERON:0002728 | 86.05 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 85.94 | gold quality |
| cingulate cortex | UBERON:0003027 | 85.92 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-75140 | yes | 946.41 |
| E-ANND-3 | yes | 5.39 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): AP1, FOXO1, NFKBIB, NR5A1, PAX3, PPARD, RARG, STAT6
miRNA regulators (miRDB)
275 targeting CNR1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-8485 | 100.00 | 77.57 | 4731 |
| HSA-MIR-3646 | 100.00 | 73.56 | 5283 |
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-6833-3P | 100.00 | 70.63 | 3197 |
| HSA-MIR-98-3P | 100.00 | 74.08 | 3907 |
| HSA-MIR-4768-5P | 100.00 | 69.49 | 2861 |
| HSA-LET-7A-3P | 100.00 | 74.03 | 3932 |
| HSA-LET-7B-3P | 100.00 | 74.08 | 3913 |
| HSA-LET-7F-1-3P | 100.00 | 74.02 | 3928 |
| HSA-MIR-5692B | 100.00 | 71.32 | 2622 |
| HSA-MIR-5692C | 100.00 | 71.32 | 2622 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-4455 | 100.00 | 65.48 | 1587 |
| HSA-MIR-4262 | 100.00 | 73.26 | 3931 |
| HSA-MIR-29A-3P | 100.00 | 73.11 | 1835 |
| HSA-MIR-29B-3P | 100.00 | 73.18 | 1833 |
| HSA-MIR-29C-3P | 100.00 | 73.15 | 1833 |
| HSA-MIR-30A-5P | 100.00 | 76.31 | 3233 |
| HSA-MIR-30B-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30C-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30D-5P | 100.00 | 76.32 | 3233 |
| HSA-MIR-30E-5P | 100.00 | 76.32 | 3242 |
| HSA-MIR-450A-1-3P | 100.00 | 69.33 | 1837 |
| HSA-MIR-190A-3P | 100.00 | 80.35 | 5520 |
| HSA-MIR-3662 | 99.99 | 73.82 | 5684 |
| HSA-MIR-3185 | 99.99 | 68.12 | 1959 |
| HSA-MIR-181A-5P | 99.99 | 72.96 | 2995 |
| HSA-MIR-181B-5P | 99.99 | 72.97 | 2996 |
| HSA-MIR-181C-5P | 99.99 | 72.95 | 2996 |
| HSA-MIR-181D-5P | 99.99 | 73.04 | 2997 |
Literature-anchored findings (GeneRIF, showing 40)
- CB1 and CB2 receptor mRNA expression in human peripheral blood mononuclear cells (PBMC) from various donor types. (PMID:11727770)
- Results are the first report of an significant association between CB1 receptor and a subtype of schizophrenia. (PMID:11803524)
- suggested that homozygous genotype CNR1 1359A/A confers vulnerability to alcohol withdrawal delirium. (PMID:11841893)
- a nigro-striatal lesion is associated with an increase in CB1 receptors in the basal ganglia in humans and nonhuman primates and that this increase could be reversed by chronic l-DOPA therapy. (PMID:11860478)
- recombinant protein shows high potency with an endogenous capsaicin-like substance (PMID:12060783)
- associated with susceptibility to hebephrenic schizophrenia (PMID:12082570)
- role of intracellular loops of cannabinoid CB1 receptor in functional interaction with Galpha16. (PMID:12095632)
- dendritic cells were also found to express measurable amounts of CB1 and CB2 receptors and of FAAH. Cell maturation did not consistently modify the expression of these proteins (PMID:12153574)
- CB(1)-induced ERK activation was mediated by PI3K(IB) and this effect may have important consequences in the control of cell death/survival decision. (PMID:12435806)
- both mRNA for CB(1) and the corresponding protein are expressed in human prostate gland at level comparable with the receptor expressed in cerebellum; CB(1) preferentially expressed in prostate epithelia (PMID:12497582)
- CB1 plays a role in inhibiting neovascularization and skin neoplasm development (PMID:12511587)
- evidence that CB1 is able to potentiate an orexigenic receptor, OX1R (PMID:12690115)
- CB1 receptor expression throughout the different areas of the developing human brain suggests a specific role of the endocannabinoid system in the events related to human neural development. (PMID:12752773)
- homology model of the CB(1) cannabinoid receptor (PMID:12767117)
- High level of cannabinoid receptor 1 is associated with mantle cell lymphoma (PMID:12970790)
- CB1 receptor mRNA expression was altered in Parkinson’s disease and was affected by alterations in dopaminergic systems. (PMID:14628192)
- Restricting AN and binging/purging AN may be associated with different alleles of the CNR1 gene coding cannabinoid receptor 1. (PMID:14755457)
- delta(9)-THC induces an influx of extracellular calcium in resting T cells in a CB1- CB2- -dependent manner (PMID:14966196)
- upregulation of CB(1) receptors with concomitant increase in the CB(1) receptor-mediated [(35)S]GTPgammaS binding suggests a role for enhanced cannabinoidergic signaling in the prefrontal cortex of depressed suicides (PMID:14966476)
- A 5’ Cnr1 “TAG” haplotype displays significant allelic frequency differences between substance abusers & controls in European-American, African-American & Japanese samples. Cnr1 genomic variation appears to play roles in human addiction vulnerability. (PMID:15289816)
- the cannabinoid receptor CB1 was not identified in first trimester placenta (PMID:15472222)
- Human sperm express functional CB(1)-R, the activation of which negatively influences important sperm functions such as motility. (PMID:15562018)
- Identification of a splice variant of the human CB1 receptor. (PMID:15620723)
- lipid rafts control CB1R binding and signaling, and CB1R activation underlies the protective effect of methyl-beta-cyclodextrin against apoptosis (PMID:15657045)
- the presence of two long alleles in the cnr1 gene was associated with a reduced prevalence of depression in parkinson disease (PMID:15668727)
- Senile plaques in AD patients express CB1 receptors which show increased nitration. G-protein coupling and CB1 receptor protein expression are markedly decreased in AD brains. (PMID:15728830)
- CB1 and CB2 immunoreactivity was observed in cutaneous nerve fiber bundles, mast cells, macrophages, epidermal keratinocytes, and the epithelial cells of hair follicles, sebocytes and eccrine sweat glands. (PMID:15927811)
- Tole of cysteine residues in CB1 ligand binding and activation, and demonstrate a method for mapping key determinants in CB1 structure and function (PMID:15952782)
- No convincing association is found for cannabinoid receptor type 1 (Cnr1) in a systematic genetic association study in a human sample of postmenopausal osteoporosis patients and matched female controls (PMID:16204352)
- CB1R is associated with cholesterol- and sphyngolipid-enriched membrane domains (rafts). (PMID:16263116)
- CB(1) receptors are stabilized in a conformation that enables G(q)11 signaling by the WIN55212-2 cannabinoid agonist, thus shifting the G protein specificity of the receptor (PMID:16365309)
- 4 SNPs in the CNR1 gene are found to be positively associated with striatal response to happy faces (and not to disgust faces) in humans, using fMRI. (PMID:16623851)
- decreased thermal stability of T210I receptor & increased level of internalization of a T210I receptor-GFP chimera were also observed. Results suggest that T210 plays key role in governing transition between inactive & active CB(1) receptor states. (PMID:16634642)
- Sequential assignments of TM5 and intra-cellular loop 3 were accomplished. The obtained structure also showed alpha-helix in the TM5 region, but it was interrupted by a disordered region (Gly204_ILe206). (PMID:16712507)
- study shows that CB1 receptors are upregulated in the liver of cirrhotic individuals and expressed in liver fibrogenic cells (PMID:16715087)
- Findings fail to replicate the original report of an association between SNPs adjacent to an alternative CNR1 exon 3 transcription start site and polysubstance abuse. (PMID:16741937)
- analysis of human cannabinoid receptor 1 truncation (PMID:16818376)
- A common CNR1 haplotype is associated with developing fewer cannabis dependence symptoms among adolescents who have experimented with cannabis. (PMID:16917946)
- Antagonists may prove beneficial in the treatment of proliferative liver fibrosis. (PMID:16962033)
- lipid rafts control CB1R, but not CB2R, and endocannabinoid transport in immune and neuronal cells. (PMID:17015679)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | cnr1 | ENSDARG00000009020 |
| mus_musculus | Cnr1 | ENSMUSG00000044288 |
| rattus_norvegicus | Cnr1 | ENSRNOG00000008223 |
Paralogs (18): LPAR2 (ENSG00000064547), MC3R (ENSG00000124089), S1PR4 (ENSG00000125910), GPR12 (ENSG00000132975), GPR6 (ENSG00000146360), GPR119 (ENSG00000147262), MC4R (ENSG00000166603), S1PR1 (ENSG00000170989), LPAR3 (ENSG00000171517), MC5R (ENSG00000176136), S1PR5 (ENSG00000180739), GPR3 (ENSG00000181773), MC2R (ENSG00000185231), CNR2 (ENSG00000188822), LPAR1 (ENSG00000198121), S1PR3 (ENSG00000213694), MC1R (ENSG00000258839), S1PR2 (ENSG00000267534)
Protein
Protein identifiers
Cannabinoid receptor 1 — P21554 (reviewed: P21554)
Alternative names: CANN6
All UniProt accessions (5): P21554, F8W187, F8W908, S5TLS4, V5KA96
UniProt curated annotations — full annotation on UniProt →
Function. G-protein coupled receptor for endogenous cannabinoids (eCBs), including N-arachidonoylethanolamide (also called anandamide or AEA) and 2-arachidonoylglycerol (2-AG), as well as phytocannabinoids, such as delta(9)-tetrahydrocannabinol (THC). Mediates many cannabinoid-induced effects, acting, among others, on food intake, memory loss, gastrointestinal motility, catalepsy, ambulatory activity, anxiety, chronic pain. Signaling typically involves reduction in cyclic AMP. In the hypothalamus, may have a dual effect on mitochondrial respiration depending upon the agonist dose and possibly upon the cell type. Increases respiration at low doses, while decreases respiration at high doses. At high doses, CNR1 signal transduction involves G-protein alpha-i protein activation and subsequent inhibition of mitochondrial soluble adenylate cyclase, decrease in cyclic AMP concentration, inhibition of protein kinase A (PKA)-dependent phosphorylation of specific subunits of the mitochondrial electron transport system, including NDUFS2. In the hypothalamus, inhibits leptin-induced reactive oxygen species (ROS) formation and mediates cannabinoid-induced increase in SREBF1 and FASN gene expression. In response to cannabinoids, drives the release of orexigenic beta-endorphin, but not that of melanocyte-stimulating hormone alpha/alpha-MSH, from hypothalamic POMC neurons, hence promoting food intake. In the hippocampus, regulates cellular respiration and energy production in response to cannabinoids. Involved in cannabinoid-dependent depolarization-induced suppression of inhibition (DSI), a process in which depolarization of CA1 postsynaptic pyramidal neurons mobilizes eCBs, which retrogradely activate presynaptic CB1 receptors, transiently decreasing GABAergic inhibitory neurotransmission. Also reduces excitatory synaptic transmission. In superior cervical ganglions and cerebral vascular smooth muscle cells, inhibits voltage-gated Ca(2+) channels in a constitutive, as well as agonist-dependent manner. In cerebral vascular smooth muscle cells, cannabinoid-induced inhibition of voltage-gated Ca(2+) channels leads to vasodilation and decreased vascular tone. Induces leptin production in adipocytes and reduces LRP2-mediated leptin clearance in the kidney, hence participating in hyperleptinemia. In adipose tissue, CNR1 signaling leads to increased expression of SREBF1, ACACA and FASN genes. In the liver, activation by endocannabinoids leads to increased de novo lipogenesis and reduced fatty acid catabolism, associated with increased expression of SREBF1/SREBP-1, GCK, ACACA, ACACB and FASN genes. May also affect de novo cholesterol synthesis and HDL-cholesteryl ether uptake. Peripherally modulates energy metabolism. In high carbohydrate diet-induced obesity, may decrease the expression of mitochondrial dihydrolipoyl dehydrogenase/DLD in striated muscles, as well as that of selected glucose/ pyruvate metabolic enzymes, hence affecting energy expenditure through mitochondrial metabolism. In response to cannabinoid anandamide, elicits a pro-inflammatory response in macrophages, which involves NLRP3 inflammasome activation and IL1B and IL18 secretion. In macrophages infiltrating pancreatic islets, this process may participate in the progression of type-2 diabetes and associated loss of pancreatic beta-cells. Binds both 2-arachidonoylglycerol (2-AG) and anandamide. Only binds 2-arachidonoylglycerol (2-AG) with high affinity. Contrary to its effect on isoform 1, 2-AG behaves as an inverse agonist on isoform 2 in assays measuring GTP binding to membranes. Only binds 2-arachidonoylglycerol (2-AG) with high affinity. Contrary to its effect on isoform 1, 2-AG behaves as an inverse agonist on isoform 3 in assays measuring GTP binding to membranes.
Subunit / interactions. Interacts (via C-terminus) with CNRIP1; this interaction attenuates constitutive, but not agonist-dependent, inhibition of voltage-gated Ca(2+) channels in neurons. Associates with G protein alpha subunits, including G(i) alpha-1/GNAI1, G(i) alpha-2/GNAI2, G(i) alpha-3/GNAI3 and G(o)-alpha/GNAO1; palmitoylation is important for interaction with GNAI3 and GNAO1.
Subcellular location. Cell membrane. Membrane raft. Mitochondrion outer membrane. Cell projection. Axon. Presynapse.
Tissue specificity. Widely expressed, with highest levels in fetal and adult brain. Expression levels of isoform 2 and isoform 3 are much lower than those of isoform 1.
Post-translational modifications. Palmitoylation at Cys-415 is important for recruitment at plasma membrane and lipid rafts and association with G protein alpha subunits.
Disease relevance. Obesity (OBESITY) [MIM:601665] A condition characterized by an increase of body weight beyond the limitation of skeletal and physical requirements, as the result of excessive accumulation of body fat. The protein represented in this entry may be involved in disease pathogenesis. May contribute to the development of diet-induced obesity and several obesity-associated features, such as dyslipidemia and liver steatosis, regulating peripheral lipogenesis, energy expenditure and feeding behavior. CNR1 inverse agonists have been shown to reduce body weight and improve metabolic abnormalities in obese subjects, although adverse neuropsychiatric effects, including anxiety, irritability, and depressed mood, halted their therapeutic development. In obese mice, peripherally restricted CNR1 inverse agonists have been shown to normalize metabolic abnormalities, including insulin resistance and fatty liver, and to reverse leptin resistance. Dysfunction of the endogenous cannabinoid system including CNR1 has been implicated in the pathogenesis of a number of central nervous system disorders, including Huntington disease, Parkinson disease, and Alzheimer disease. In post-mortem brains from Huntington disease patients, a progressive CNR1 loss has been observed in the caudate nucleus, putamen, and substantia nigra pars reticulata, and altered expression and abnormal endocannabinoid levels precede motor symptoms in a disease mouse model. In Parkinson disease, low CNR1 expression in mid-superior frontal gyrus and mid-cingulate cortex has been associated with poor mind, poor executive functioning and poor episode memory, while patients with more severe visuospatial dysfunction showed decreased receptor availability in the precuneus, mid-cingulate, supplementary motor cortex, inferior orbitofrontal gyrus and thalamus. In an animal model for Alzheimer disease, CNR1 heterozygous deletion has been associated with decreased levels of postsynaptic density protein 95 (DLG4/PSD95) and accelerated memory impairment, suggesting synaptic dysfunction and a crucial role for CNR1 in the progression of disease symptoms.
Activity regulation. Hemopressin, a peptide derived from hemoglobin subunit alpha (HBA1 and/or HBA2), acts as an antagonist peptide: hemopressin-binding efficiently blocks cannabinoid receptor CNR1 and subsequent signaling.
Induction. Up-regulated by endocannabinoid anandamide.
Miscellaneous. High-fat diet also increases the hepatic levels of CNR1 ligand anandamide, but not that of 2-arachidonoylglycerol. Dubious isoform. A putative downstream initiation AUG is used to produce isoform 2. The use of the first AUG (same as isoform 1) gives a truncated protein of 36 AA.
Similarity. Belongs to the G-protein coupled receptor 1 family.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P21554-1 | 1, Long | yes |
| P21554-2 | 2, CB1a, Short | |
| P21554-3 | 3, CB1b |
RefSeq proteins (17): NP_001153698, NP_001153730, NP_001153731, NP_001352798, NP_001352799, NP_001352801, NP_001352803, NP_001357474, NP_001357475, NP_001357476, NP_001411023, NP_001411024, NP_001411025, NP_001411026, NP_001411027, NP_057167, NP_149421 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000276 | GPCR_Rhodpsn | Family |
| IPR000810 | Canbinoid_rcpt_1 | Family |
| IPR002230 | Cnbnoid_rcpt | Family |
| IPR017452 | GPCR_Rhodpsn_7TM | Domain |
Pfam: PF00001
UniProt features (57 total): helix 17, topological domain 8, sequence conflict 8, transmembrane region 7, mutagenesis site 5, modified residue 2, glycosylation site 2, splice variant 2, strand 2, chain 1, region of interest 1, lipid moiety-binding region 1, turn 1
Structure
Experimental structures (PDB)
34 structures, top 30 by resolution.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 23IV | ELECTRON MICROSCOPY | 2.42 |
| 23IW | ELECTRON MICROSCOPY | 2.42 |
| 5U09 | X-RAY DIFFRACTION | 2.6 |
| 7FEE | X-RAY DIFFRACTION | 2.7 |
| 5TGZ | X-RAY DIFFRACTION | 2.8 |
| 5XRA | X-RAY DIFFRACTION | 2.8 |
| 8GHV | ELECTRON MICROSCOPY | 2.8 |
| 9B54 | ELECTRON MICROSCOPY | 2.86 |
| 8K8J | ELECTRON MICROSCOPY | 2.88 |
| 9ERX | ELECTRON MICROSCOPY | 2.9 |
| 5XR8 | X-RAY DIFFRACTION | 2.95 |
| 6KPG | ELECTRON MICROSCOPY | 3 |
| 6N4B | ELECTRON MICROSCOPY | 3 |
| 9B65 | ELECTRON MICROSCOPY | 3.03 |
| 9BA0 | ELECTRON MICROSCOPY | 3.13 |
| 8WU1 | ELECTRON MICROSCOPY | 3.2 |
| 9EGO | ELECTRON MICROSCOPY | 3.2 |
| 6KQI | X-RAY DIFFRACTION | 3.25 |
| 7V3Z | X-RAY DIFFRACTION | 3.29 |
| 8GAG | ELECTRON MICROSCOPY | 3.3 |
| 8IKH | ELECTRON MICROSCOPY | 3.3 |
| 9B9Z | ELECTRON MICROSCOPY | 3.3 |
| 9DGI | ELECTRON MICROSCOPY | 3.35 |
| 7WV9 | ELECTRON MICROSCOPY | 3.36 |
| 8IKG | ELECTRON MICROSCOPY | 3.4 |
| 9B9Y | ELECTRON MICROSCOPY | 3.5 |
| 8WRZ | ELECTRON MICROSCOPY | 3.6 |
| 1LVQ | SOLUTION NMR | |
| 1LVR | SOLUTION NMR | |
| 2B0Y | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P21554-F1 | 72.11 | 0.48 |
Antibody-complex structures (SAbDab): 14 — 6KPG, 6N4B, 7WV9, 8GAG, 8GHV, 8IKG, 8IKH, 8K8J, 8WRZ, 8WU1, 9B65, 9B9Y, 9EGO, 9ERX
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (3): 425, 429, 415
Glycosylation sites (2): 77, 83
Mutagenesis-validated functional residues (5):
| Position | Phenotype |
|---|---|
| 155 | enhanced g(i) signaling activation ability. |
| 155 | reduced agonist-induced receptor activation. |
| 210 | 7-fold lower affinity for a synthetic agonist, cp55940, possibly due the stabilization of an inactive conformation. |
| 341–342 | loss of activity, when assayed for gnai1 gtpase stimulatory activity. |
| 415 | loss of palmitoylation, marked loss of association with lipid rafts on the plasma membrane and loss of activity, when as |
Function
Pathways and Gene Ontology
Reactome pathways
2 pathways
| ID | Pathway |
|---|---|
| R-HSA-373076 | Class A/1 (Rhodopsin-like receptors) |
| R-HSA-418594 | G alpha (i) signalling events |
MSigDB gene sets: 275 (showing top):
chr6q15, TGGTGCT_MIR29A_MIR29B_MIR29C, BEGUM_TARGETS_OF_PAX3_FOXO1_FUSION_UP, RRAGTTGT_UNKNOWN, MULLIGHAN_NPM1_SIGNATURE_3_UP, GOBP_NEURON_RECOGNITION, MODULE_64, GOBP_NEUROGENESIS, HASLINGER_B_CLL_WITH_11Q23_DELETION, GOBP_CELL_CELL_SIGNALING, MARTORIATI_MDM4_TARGETS_NEUROEPITHELIUM_DN, GOBP_ADENYLATE_CYCLASE_MODULATING_G_PROTEIN_COUPLED_RECEPTOR_SIGNALING_PATHWAY, MODULE_205, KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION, GOCC_MITOCHONDRIAL_ENVELOPE
GO Biological Process (10): G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger (GO:0007187), adenylate cyclase-modulating G protein-coupled receptor signaling pathway (GO:0007188), adenylate cyclase-activating G protein-coupled receptor signaling pathway (GO:0007189), axonal fasciculation (GO:0007413), cannabinoid signaling pathway (GO:0038171), glucose homeostasis (GO:0042593), retrograde trans-synaptic signaling by endocannabinoid (GO:0098921), regulation of presynaptic cytosolic calcium ion concentration (GO:0099509), signal transduction (GO:0007165), G protein-coupled receptor signaling pathway (GO:0007186)
GO Molecular Function (4): G protein-coupled receptor activity (GO:0004930), cannabinoid receptor activity (GO:0004949), identical protein binding (GO:0042802), protein binding (GO:0005515)
GO Cellular Component (15): cytoplasm (GO:0005737), mitochondrial outer membrane (GO:0005741), plasma membrane (GO:0005886), actin cytoskeleton (GO:0015629), growth cone (GO:0030426), presynaptic membrane (GO:0042734), membrane raft (GO:0045121), glutamatergic synapse (GO:0098978), GABA-ergic synapse (GO:0098982), mitochondrion (GO:0005739), membrane (GO:0016020), axon (GO:0030424), cell projection (GO:0042995), synapse (GO:0045202), presynapse (GO:0098793)
Reactome top-level categories
Rollup of top-2 pathways:
| Category | Pathways |
|---|---|
| GPCR ligand binding | 1 |
| GPCR downstream signalling | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| G protein-coupled receptor signaling pathway | 4 |
| cellular anatomical structure | 4 |
| synapse | 3 |
| presynapse | 2 |
| G protein-coupled receptor activity | 2 |
| adenylate cyclase activity | 1 |
| adenylate cyclase-modulating G protein-coupled receptor signaling pathway | 1 |
| adenylate cyclase activator activity | 1 |
| neuron recognition | 1 |
| axon development | 1 |
| neuron projection fasciculation | 1 |
| cannabinoid receptor activity | 1 |
| carbohydrate homeostasis | 1 |
| retrograde trans-synaptic signaling by lipid | 1 |
| trans-synaptic signaling by endocannabinoid | 1 |
| regulation of cytosolic calcium ion concentration | 1 |
| neuron cellular homeostasis | 1 |
| cell communication | 1 |
| cellular process | 1 |
| signaling | 1 |
| regulation of cellular process | 1 |
| cellular response to stimulus | 1 |
| signal transduction | 1 |
| transmembrane signaling receptor activity | 1 |
| cannabinoid signaling pathway | 1 |
| protein binding | 1 |
| binding | 1 |
| intracellular anatomical structure | 1 |
| mitochondrial membrane | 1 |
| organelle outer membrane | 1 |
| membrane | 1 |
| cell periphery | 1 |
| cytoskeleton | 1 |
| site of polarized growth | 1 |
| distal axon | 1 |
| synaptic membrane | 1 |
| membrane microdomain | 1 |
| cytoplasm | 1 |
| intracellular membrane-bounded organelle | 1 |
| neuron projection | 1 |
Protein interactions and networks
STRING
1602 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| CNR1 | GPR55 | Q9Y2T6 | 974 |
| CNR1 | FAAH | O00519 | 972 |
| CNR1 | MGLL | Q99685 | 941 |
| CNR1 | ADORA2A | P29274 | 884 |
| CNR1 | DRD2 | P14416 | 867 |
| CNR1 | DAGLA | Q9Y4D2 | 818 |
| CNR1 | NAPEPLD | Q6IQ20 | 801 |
| CNR1 | NTRK2 | Q16620 | 794 |
| CNR1 | TRPV1 | Q8NER1 | 778 |
| CNR1 | BDNF | P23560 | 777 |
| CNR1 | CNRIP1 | Q96F85 | 745 |
| CNR1 | ARRB2 | P32121 | 744 |
| CNR1 | ARRB1 | P49407 | 737 |
| CNR1 | HCRT | O43612 | 731 |
| CNR1 | GNAQ | P50148 | 728 |
IntAct
55 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| ADORA2A | DRD2 | psi-mi:“MI:2364”(proximity) | 0.680 |
| ADORA2A | CNR1 | psi-mi:“MI:0915”(physical association) | 0.680 |
| CNR1 | ADORA2A | psi-mi:“MI:2364”(proximity) | 0.680 |
| CNR1 | ADORA2A | psi-mi:“MI:0403”(colocalization) | 0.680 |
| ADRB2 | ADRB2 | psi-mi:“MI:2364”(proximity) | 0.660 |
| CNR1 | CNR1 | psi-mi:“MI:2364”(proximity) | 0.650 |
| CNR1 | CNR1 | psi-mi:“MI:0915”(physical association) | 0.650 |
| CNR2 | CNR1 | psi-mi:“MI:2364”(proximity) | 0.510 |
| CNR2 | CNR1 | psi-mi:“MI:0403”(colocalization) | 0.510 |
| CNR1 | DRD2 | psi-mi:“MI:2364”(proximity) | 0.470 |
| CNR1 | DRD2 | psi-mi:“MI:0915”(physical association) | 0.470 |
| CNR1 | HTR2A | psi-mi:“MI:2364”(proximity) | 0.450 |
| CNR1 | HTR2A | psi-mi:“MI:0915”(physical association) | 0.450 |
| CNR1 | psi-mi:“MI:0915”(physical association) | 0.400 | |
| RAMP2 | CNR1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| CNR1 | RAMP3 | psi-mi:“MI:0915”(physical association) | 0.400 |
| RAMP3 | CNR1 | psi-mi:“MI:0915”(physical association) | 0.400 |
BioGRID (13): SSTR5 (Affinity Capture-Western), SSTR5 (FRET), CNR1 (FRET), NSRP1 (Reconstituted Complex), GNAI1 (Affinity Capture-Western), GNAI2 (Affinity Capture-Western), GNAI3 (Affinity Capture-Western), CNR1 (FRET), CNR1 (FRET), CNR1 (Two-hybrid), GRIN2B (Co-localization), CNR1 (Cross-Linking-MS (XL-MS)), CNR1 (Affinity Capture-Western)
ESM2 similar proteins: A0A2R9YJI3, B2ZHY2, B3DM66, B4XF06, D4A3U0, O02777, O43194, O46635, P08909, P08911, P0C0W8, P14842, P18599, P20272, P21554, P28223, P28335, P32240, P34311, P34968, P35363, P47746, P50128, P50129, P56971, P70259, Q09502, Q333S9, Q5IS53, Q5IS66, Q5IS73, Q5IS98, Q5R4Q6, Q5U431, Q60F97, Q6DWJ6, Q71SP5, Q75Z89, Q801M1, Q80UC8
Diamond homologs: O02777, O08530, O77408, O77621, O95136, P20272, P21453, P21554, P30546, P30966, P31389, P31390, P34972, P35367, P47746, P47752, P47936, P48303, P52592, P56971, P70174, Q17232, Q28928, Q333S9, Q5E9P3, Q5IS73, Q71SP5, Q7JQF1, Q801M1, Q90WY5, Q98894, Q98895, Q9DDK4, Q9H228, Q9I8K8, Q9N2B0, Q9N2B1, Q9N2B2, Q9PUI7, Q9PUQ8
SIGNOR signaling
13 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| “Org 27569” | down-regulates | CNR1 | “chemical inhibition” |
| CNR1 | “up-regulates activity” | GNAO1 | |
| CNR1 | “up-regulates activity” | GNAI1 | binding |
| CNR1 | “up-regulates activity” | GNAI3 | binding |
| CNR1 | “up-regulates activity” | GNAO1 | binding |
| CNR1 | “up-regulates activity” | GNAZ | binding |
| CNR1 | “up-regulates activity” | GNA14 | binding |
| CNR1 | “up-regulates activity” | GNA12 | binding |
| CNR1 | “up-regulates activity” | GNA13 | binding |
| 5-(1,1-Dimethylheptyl)-2-[5-hydroxy-2-(3-hydroxypropyl)cyclohexyl]phenol | “up-regulates activity” | CNR1 | “chemical activation” |
| “episterol ester” | “up-regulates activity” | CNR1 | “chemical activation” |
| Delta(9)-tetrahydrocannabinol | “up-regulates activity” | CNR1 | “chemical activation” |
| CNR1 | “up-regulates activity” | HCRTR1 | binding |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 15 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| G alpha (s) signalling events | 6 | 36.6× | 3e-07 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| adenylate cyclase-activating G protein-coupled receptor signaling pathway | 6 | 52.2× | 2e-07 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
53 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 37 |
| Likely benign | 9 |
| Benign | 1 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
858 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 6:88165801:AC:A | donor_gain | 0.9900 |
| 6:88165802:CC:C | donor_gain | 0.9900 |
| 6:88164297:T:C | acceptor_gain | 0.9800 |
| 6:88166091:T:TA | donor_gain | 0.9800 |
| 6:88165798:CTTAC:C | donor_loss | 0.9600 |
| 6:88165799:TTAC:T | donor_loss | 0.9600 |
| 6:88165800:TACCC:T | donor_loss | 0.9600 |
| 6:88165801:A:C | donor_loss | 0.9600 |
| 6:88165802:C:CA | donor_loss | 0.9600 |
| 6:88164297:T:TC | acceptor_gain | 0.9500 |
| 6:88165802:CCCTT:C | donor_gain | 0.9500 |
| 6:88165840:TGGC:T | donor_gain | 0.9500 |
| 6:88166327:C:CA | donor_gain | 0.9500 |
| 6:88165801:A:AC | donor_gain | 0.9400 |
| 6:88165802:C:CC | donor_gain | 0.9400 |
| 6:88166213:C:A | donor_gain | 0.9400 |
| 6:88164292:CAT:C | acceptor_gain | 0.9300 |
| 6:88166212:T:TA | donor_gain | 0.9300 |
| 6:88164296:T:C | acceptor_gain | 0.9200 |
| 6:88165664:CAG:C | donor_gain | 0.9200 |
| 6:88166088:G:A | donor_gain | 0.9200 |
| 6:88165726:TGGGG:T | donor_gain | 0.9100 |
| 6:88143912:TG:T | donor_gain | 0.8900 |
| 6:88164295:C:CC | acceptor_gain | 0.8900 |
| 6:88143829:T:A | donor_gain | 0.8800 |
| 6:88145337:CCTAA:C | acceptor_loss | 0.8800 |
| 6:88145338:C:CA | acceptor_loss | 0.8800 |
| 6:88145339:T:A | acceptor_loss | 0.8800 |
| 6:88165836:C:CA | donor_gain | 0.8800 |
| 6:88145338:C:CC | acceptor_gain | 0.8600 |
AlphaMissense
0 scored. Top likely-pathogenic:
dbSNP variants (sampled 300 via entrez): RS1000139586 (6:88166546 G>A), RS1000225400 (6:88154370 T>C), RS1000453745 (6:88158888 T>C), RS1000600398 (6:88150201 C>G), RS1000703054 (6:88165044 ATTTCT>A), RS1000792029 (6:88160199 G>A,C), RS1000937167 (6:88162537 G>C,T), RS1000945401 (6:88153779 A>G), RS1001008397 (6:88147676 G>A,C,T), RS1001009131 (6:88154310 A>C), RS1001056330 (6:88150550 A>C), RS1001087521 (6:88167565 C>T), RS1001275508 (6:88153618 T>A,C), RS1001319748 (6:88166299 T>G), RS1001392591 (6:88162340 A>T)
Disease associations
OMIM: gene MIM:114610 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
2 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST003854_22 | Gut microbiota (functional units) | 4.000000e-08 |
| GCST006427_10 | Depression in smokers | 2.000000e-06 |
EFO canonical traits (1, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0007874 | gut microbiome measurement |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (4): CHEMBL2096981 (PROTEIN FAMILY), CHEMBL218 (SINGLE PROTEIN), CHEMBL3301387 (PROTEIN COMPLEX), CHEMBL3885538 (PROTEIN COMPLEX)
Molecules with ChEMBL bioactivity
110 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 579,519 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL465 | DRONABINOL | 4 | 62,107 |
| CHEMBL1008 | BEPRIDIL | 4 | 11,776 |
| CHEMBL1014 | CANDESARTAN CILEXETIL | 4 | 11,194 |
| CHEMBL1073 | GLIPIZIDE | 4 | 42,268 |
| CHEMBL1082407 | ENZALUTAMIDE | 4 | 9,652 |
| CHEMBL11 | IMIPRAMINE | 4 | 48,893 |
| CHEMBL111 | RIMONABANT | 4 | 15,726 |
| CHEMBL113 | CAFFEINE | 4 | 200,591 |
| CHEMBL116 | AMPRENAVIR | 4 | 29,221 |
| CHEMBL1200500 | BECLOMETHASONE DIPROPIONATE | 4 | 29,239 |
| CHEMBL1200617 | RIMEXOLONE | 4 | 891 |
| CHEMBL1200732 | AMCINONIDE | 4 | 16,116 |
| CHEMBL1200989 | ALCLOMETASONE DIPROPIONATE | 4 | 8,201 |
| CHEMBL1201151 | MESTRANOL | 4 | 10,339 |
| CHEMBL1201271 | BUCLIZINE | 4 | 5,799 |
| CHEMBL1201303 | PYRVINIUM | 4 | 1,797 |
| CHEMBL1201304 | INDOCYANINE GREEN ACID FORM | 4 | 7,044 |
| CHEMBL121 | ROSIGLITAZONE | 4 | 58,849 |
| CHEMBL12713 | SERTINDOLE | 4 | 8,984 |
| CHEMBL1303 | ROTIGOTINE | 4 | 832 |
| CHEMBL1428 | NIMODIPINE | 4 | |
| CHEMBL1480 | FELODIPINE | 4 | |
| CHEMBL1525 | PERMETHRIN | 4 | |
| CHEMBL1530428 | DEXAMETHASONE ACETATE | 4 | |
| CHEMBL1623 | MECLIZINE | 4 | |
| CHEMBL1651990 | FENTICONAZOLE | 4 | |
| CHEMBL1670 | MITOTANE | 4 | |
| CHEMBL1676 | FLUTICASONE FUROATE | 4 | |
| CHEMBL1726 | NISOLDIPINE | 4 | |
| CHEMBL175247 | ORLISTAT | 4 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB clinical annotations
7 annotations.
| Variant | Type | Level | Drugs | Phenotypes |
|---|---|---|---|---|
| rs1049353 | Toxicity | 3 | risperidone | Autism Spectrum Disorder;Psychotic Disorder |
| rs2023239 | Toxicity | 3 | opioids | Opioid-Related Disorders |
| rs6454674 | Other | 3 | cocaine | Cocaine dependence |
| rs6928499 | Toxicity | 3 | opioids | Opioid-Related Disorders |
| rs806368 | Other | 3 | cocaine | Cocaine dependence |
| rs806368 | Dosage | 3 | methadone | Heroin Dependence |
| rs806378 | Toxicity | 3 | clozapine;olanzapine;risperidone | Autism Spectrum Disorder;Schizophrenia |
PharmGKB variants
10 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs806368 | CNR1 | 3 | 2.75 | 2 | methadone;cocaine |
| rs806374 | CNR1 | 0.00 | 0 | ||
| rs806377 | CNR1 | 0.00 | 0 | ||
| rs806378 | CNR1 | 3 | 2.00 | 1 | clozapine;olanzapine;risperidone |
| rs1049353 | CNR1 | 3 | 0.75 | 1 | risperidone |
| rs6454674 | CNR1 | 3 | 2.50 | 1 | cocaine |
| rs12720071 | CNR1 | 0.00 | 0 | ||
| rs6928499 | CNR1 | 3 | 2.00 | 1 | opioids |
| rs806380 | CNR1 | 0.00 | 0 | ||
| rs2023239 | CNR1 | 3 | 2.00 | 1 | opioids |
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: gpcr — Cannabinoid receptors
Most potent curated ligand interactions (61 total), top 25:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| monlunabant | Inverse agonist | 10.68 | pIC50 |
| [3H]HU-243 | Full agonist | 10.4 | pKd |
| HU-210 | Full agonist | 10.2 | pKi |
| MDMB-Fubinaca | Agonist | 10.01 | pKi |
| [3H]rimonabant | Antagonist | 10.0 | pKd |
| AM11542 | Agonist | 9.96 | pKi |
| [123I]AM251 | Antagonist | 9.6 | pKd |
| taranabant | Inverse agonist | 9.52 | pKi |
| JD5037 | Antagonist | 9.46 | pKi |
| [3H]CP55940 | Full agonist | 9.4 | pKd |
| CP55940 | Full agonist | 9.2 | pKi |
| otenabant | Inverse agonist | 9.15 | pKi |
| PF-514273 | Antagonist | 9.09 | pKi |
| AM841 | Agonist | 8.94 | pKi |
| arachidonyl-2-chloroethylamide | Full agonist | 8.9 | pKi |
| WIN55212-2 | Full agonist | 8.7 | pKi |
| arachidonylcyclopropylamide | Full agonist | 8.7 | pKi |
| rimonabant | Antagonist | 8.7 | pKi |
| MRI-1867 | Inverse agonist | 8.64 | pKi |
| selonabant | Antagonist | 8.64 | pKi |
| AM7499 | Agonist | 8.62 | pKi |
| levonantradol | Agonist | 8.54 | pKi |
| O-1812 | Full agonist | 8.5 | pKi |
| AM6545 | Antagonist | 8.48 | pKi |
| surinabant | Antagonist | 8.46 | pKi |
Binding affinities (BindingDB)
1230 measured of 2864 human assays (2868 total across all organisms); most potent 50 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| CHEMBL4873473 | EC50 | 0.02 nM | |
| CHEMBL4872695 | EC50 | 0.08 nM | |
| dibenzothiazepine, 12e | KI | 0.2 nM | |
| dibenzothiazepine, 12h | KI | 0.2 nM | |
| 4-[8-(2-chlorophenyl)-9-(4-chlorophenyl)purin-6-yl]-1-phenylcyclohexane-1-carboxamide | KI | 0.28 nM | US-9187480: Peripherally restricted diphenyl purine derivatives |
| dibenzothiazepine, 12b | KI | 0.32 nM | |
| 5-(4-chloro-3-methyl-phenyl)-1-(4-methyl-benzyl)-1H-pyrazole-3-carboxylic acid (1,3,3-trimethyl-bicyclo[2.2.1]hept-2-yl)-amide | KI | 0.4 nM | |
| (R)-3-(1,1-Dimethyl-heptyl)-9-hydroxymethyl-6,6-dimethyl-6a,7,10,10a-tetrahydro-6H-benzo[c]chromen-1-ol | KI | 0.41 nM | |
| 6-[(4-chlorophenyl)-(4-methoxyphenyl)methyl]-N-(1-phenylpiperidin-4-yl)quinazolin-4-amine | EC50 | 0.5 nM | US-9682955: Quinazoline derivatives useful as CB-1 inverse agonists |
| pyrazolopyrimidinone-based antagonist, 3 | KI | 0.6 nM | |
| 1-[8-(2-chlorophenyl)-9-(4-chlorophenyl)-9H-purin-6-yl]-4-(ethylamino)piperidine-4-carboxamide | KI | 0.7 nM | |
| lactam-based compound, 12i | KI | 0.7 nM | |
| ether-based lactam, 19e | EC50 | 0.7 nM | |
| dibenzothiazepine, 12c | KI | 0.79 nM | |
| PF-514273 | EC50 | 0.82 nM | |
| 5-[bis(4-chlorophenyl)methyl]-2-cyclopropyl-3-[1-(2-methoxyphenyl)sulfonylpiperidin-4-yl]indazole | EC50 | 1 nM | US-9682940: Indazole derivatives useful as CB-1 inverse agonists |
| 4-[[6-[bis(4-chlorophenyl)methyl]quinazolin-4-yl]amino]-1-phenylcyclohexan-1-ol | EC50 | 1 nM | US-9682955: Quinazoline derivatives useful as CB-1 inverse agonists |
| 6-[bis(4-fluorophenyl)methyl]-N-(1-phenylpiperidin-4-yl)quinazolin-4-amine | EC50 | 1 nM | US-9682955: Quinazoline derivatives useful as CB-1 inverse agonists |
| 5,6-bis-(4-bromo-phenyl)-pyrazine-2-carboxylicacid piperidin-1-ylamide | IC50 | 1 nM | |
| CAS_22475030 | KI | 1 nM | |
| 6-[bis(4-chlorophenyl)methyl]-4-[[1-(trifluoromethylsulfonyl)piperidin-4-yl]amino]-3,4,4a,5,6,7,8,8a-octahydro-1H-quinolin-2-one | EC50 | 1.2 nM | US-9266835: Quinoline derivatives useful as CB-1 inverse agonists |
| dibenzothiazepine, 12j | KI | 1.2 nM | |
| ether-based lactam, 19b | KI | 1.3 nM | |
| 2-((1R,2R,5R)-5-hydroxy-2-(3-hydroxypropyl)cyclohexyl)-5-(2-methyloctan-2-yl)phenol | KD | 1.3 nM | |
| ether-based lactam, 19c | EC50 | 1.5 nM | |
| N-[1-[8-(2-chlorophenyl)-9-(4-chlorophenyl)purin-6-yl]piperidin-4-yl]cyclopentanecarboxamide | KI | 1.54 nM | US-9187480: Peripherally restricted diphenyl purine derivatives |
| dibenzothiazepine, 12k | KI | 1.6 nM | |
| lactam-based compound, 12h | KI | 1.7 nM | |
| N-[1-[8-(2-chlorophenyl)-9-(4-chlorophenyl)purin-6-yl]piperidin-4-yl]-2-cyclohexylacetamide | KI | 1.93 nM | US-9187480: Peripherally restricted diphenyl purine derivatives |
| 5-[bis(4-methoxyphenyl)methyl]-3-[1-(trifluoromethylsulfonyl)piperidin-4-yl]-2H-indazole | EC50 | 2 nM | US-9682940: Indazole derivatives useful as CB-1 inverse agonists |
| 5-[4-[5-[bis(4-chlorophenyl)methyl]-2-cyclopropylindazol-3-yl]piperidin-1-yl]sulfonyl-2-methoxybenzoic acid | EC50 | 2 nM | US-9682940: Indazole derivatives useful as CB-1 inverse agonists |
| 5-[4-[5-[bis(4-chlorophenyl)methyl]-2-cyclopropylindazol-3-yl]piperidin-1-yl]sulfonyl-2-chlorobenzoic acid | EC50 | 2 nM | US-9682940: Indazole derivatives useful as CB-1 inverse agonists |
| 6-[bis(4-chlorophenyl)methyl]-N-[1-(2,2,2-trifluoroethyl)piperidin-4-yl]quinazolin-4-amine | EC50 | 2 nM | US-9682955: Quinazoline derivatives useful as CB-1 inverse agonists |
| 6-[bis(4-chlorophenyl)methyl]-N-(1-pyrimidin-2-ylpiperidin-4-yl)quinazolin-4-amine | EC50 | 2 nM | US-9682955: Quinazoline derivatives useful as CB-1 inverse agonists |
| 6-[bis(4-chlorophenyl)methyl]-N-(1-phenylpiperidin-4-yl)quinazolin-4-amine | EC50 | 2 nM | US-9682955: Quinazoline derivatives useful as CB-1 inverse agonists |
| 6-[bis(4-chlorophenyl)methyl]-N-(1-pyridin-2-ylpiperidin-4-yl)quinazolin-4-amine | EC50 | 2 nM | US-9682955: Quinazoline derivatives useful as CB-1 inverse agonists |
| ethyl 4-[4-[[6-[bis(4-chlorophenyl)methyl]quinazolin-4-yl]amino]piperidin-1-yl]-4-oxobutanoate | EC50 | 2 nM | US-9682955: Quinazoline derivatives useful as CB-1 inverse agonists |
| 6-[bis(4-chlorophenyl)methyl]-N-[1-(2-fluorophenyl)sulfonylpiperidin-4-yl]quinazolin-4-amine | EC50 | 2 nM | US-9682955: Quinazoline derivatives useful as CB-1 inverse agonists |
| CAS_10391336 | KI | 2 nM | |
| N-[1-[8-(2-chlorophenyl)-9-(4-chlorophenyl)purin-6-yl]piperidin-4-yl]-2-cyclopentylacetamide | KI | 2.02 nM | US-9187480: Peripherally restricted diphenyl purine derivatives |
| CHEMBL2087110 | KI | 2.03 nM | |
| N-(piperidin-1-yl)-1-(2,4-dichlorophenyl)-5-(4-iodophenyl)-4-methyl-1H-pyrazole-3-carboxamide | KI | 2.3 nM | |
| 8-(2-chlorophenyl)-9-(4-chlorophenyl)-6-(piperidin-1-yl)-9H-purine | KI | 2.3 nM | |
| 2-(3,5-dichlorophenyl)-5-(2-thiophen-2-ylpropan-2-yl)benzene-1,3-diol | KI | 2.33 nM | US-9139546: Tri-aryl/heteroaromatic cannabinoids and use thereof |
| 5-(4-chlorophenyl)-1-(2,4-dichlorophenyl)-4-methyl-N-(piperidin-1-yl)-1H-pyrazole-3-carboxamide | KD | 2.5 nM | |
| lactam-based compound, 12c | KI | 2.5 nM | |
| lactam-based compound, 12d | KI | 2.5 nM | |
| N-[1-[8-(2-chlorophenyl)-9-(4-chlorophenyl)purin-6-yl]piperidin-4-yl]benzamide | KI | 2.55 nM | US-9187480: Peripherally restricted diphenyl purine derivatives |
| N-[1-[8-(2-chlorophenyl)-9-(4-chlorophenyl)purin-6-yl]piperidin-4-yl]-4-methylpentanamide | KI | 2.67 nM | US-9187480: Peripherally restricted diphenyl purine derivatives |
| 8-(2-chlorophenyl)-9-(4-chlorophenyl)-6-(4-methylpiperazin-1-yl)-9H-purine | KI | 2.8 nM |
ChEMBL bioactivities
6100 potent at pChembl≥5 of 6100 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 11.00 | Ki | 0.01 | nM | CHEMBL4062749 |
| 10.70 | EC50 | 0.02 | nM | CHEMBL4873473 |
| 10.70 | EC50 | 0.02 | nM | CHEMBL4847866 |
| 10.57 | Ki | 0.027 | nM | CHEMBL4062749 |
| 10.52 | Ki | 0.03 | nM | CHEMBL2063237 |
| 10.52 | EC50 | 0.03 | nM | CHEMBL4169198 |
| 10.40 | Ki | 0.04 | nM | CHEMBL2063236 |
| 10.40 | EC50 | 0.04 | nM | CHEMBL4862304 |
| 10.40 | EC50 | 0.04 | nM | CHEMBL4875720 |
| 10.30 | Ki | 0.05 | nM | CHEMBL2063239 |
| 10.30 | EC50 | 0.05 | nM | CHEMBL4846759 |
| 10.22 | EC50 | 0.06 | nM | CHEMBL4865162 |
| 10.22 | Ki | 0.06 | nM | CHEMBL307696 |
| 10.21 | Ki | 0.062 | nM | CHEMBL4095223 |
| 10.18 | Ki | 0.066 | nM | CHEMBL6145420 |
| 10.15 | Ki | 0.07 | nM | CHEMBL2063240 |
| 10.15 | EC50 | 0.07 | nM | CHEMBL4177060 |
| 10.10 | Ki | 0.08 | nM | CHEMBL2063246 |
| 10.10 | Ki | 0.08 | nM | CHEMBL2063249 |
| 10.10 | EC50 | 0.08 | nM | CHEMBL4872695 |
| 10.06 | EC50 | 0.088 | nM | CHEMBL5091754 |
| 10.05 | Ki | 0.09 | nM | CHEMBL2063240 |
| 10.05 | EC50 | 0.09 | nM | CHEMBL4871491 |
| 10.03 | IC50 | 0.094 | nM | TARANABANT |
| 10.01 | EC50 | 0.098 | nM | CHEMBL5081770 |
| 10.00 | Ki | 0.1 | nM | CHEMBL425047 |
| 10.00 | Ki | 0.1 | nM | CHEMBL204188 |
| 10.00 | Ki | 0.1 | nM | CHEMBL4078689 |
| 10.00 | Ki | 0.1 | nM | CHEMBL4095223 |
| 10.00 | Ki | 0.1 | nM | CHEMBL4100882 |
| 10.00 | Ki | 0.1 | nM | CHEMBL4094098 |
| 10.00 | Ki | 0.1 | nM | CHEMBL4437741 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL489438 |
| 10.00 | Ki | 0.1 | nM | CHEMBL584889 |
| 10.00 | Ki | 0.1 | nM | CHEMBL578969 |
| 10.00 | IC50 | 0.1 | nM | CHEMBL604904 |
| 10.00 | Ki | 0.1 | nM | CHEMBL111724 |
| 9.96 | Ki | 0.11 | nM | CHEMBL2063235 |
| 9.96 | Ki | 0.11 | nM | CHEMBL2063245 |
| 9.96 | Ki | 0.11 | nM | CHEMBL4087520 |
| 9.96 | Ki | 0.11 | nM | CHEMBL4559193 |
| 9.96 | IC50 | 0.11 | nM | CHEMBL594526 |
| 9.96 | IC50 | 0.11 | nM | CHEMBL605109 |
| 9.96 | EC50 | 0.11 | nM | RIMONABANT |
| 9.92 | Ki | 0.12 | nM | CHEMBL2063244 |
| 9.92 | Ki | 0.12 | nM | CHEMBL2063245 |
| 9.92 | Ki | 0.12 | nM | OTENABANT |
| 9.92 | Ki | 0.12 | nM | CHEMBL1801350 |
| 9.90 | Kd | 0.1259 | nM | IBIPINABANT |
| 9.90 | Ki | 0.1259 | nM | CHEMBL4087520 |
PubChem BioAssay actives
2493 with measured affinity, of 6100 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 12-chloro-3-(2,4-dichlorophenyl)-N-piperidin-1-yl-3,4-diazatricyclo[8.4.0.02,6]tetradeca-1(10),2(6),4,11,13-pentaene-5-carboxamide | 328661: Binding affinity to CB1 receptor | ki | <0.0001 | uM |
| N-[2-(2-chlorophenyl)-3-(4-chlorophenyl)-5,6,7,8-tetrahydrooxepino[3,2-c]pyrazol-8-yl]-2-methylpropanamide | 673842: Antagonist activity at human CB1 receptor expressed in CHO-K1 cells assessed as inhibition of CP-55940-induced [35S]GTPgammaS binding incubated for 10 mins prior to CP-55940-challenge measured after 1 hr by beta counting | ki | <0.0001 | uM |
| (4Z,7Z)-N-cyclopropyl-9-[3-[(2Z,5Z,8Z)-undeca-2,5,8-trienyl]oxiran-2-yl]nona-4,7-dienamide | 1350536: Agonist activity at N-terminal FLAG-tagged human CB1 receptor transfected in human HTLA cells assessed as induction of beta-arrestin-recruitment after 8 to 14 hrs by bright-glo luminescence based assay | ec50 | <0.0001 | uM |
| 3-pyrazin-2-yl-N-[1-(trifluoromethyl)cyclobutyl]-11-oxa-3,4-diazatricyclo[6.2.1.02,6]undeca-2(6),4-diene-5-carboxamide | 1768789: Agonist activity at human CB1 receptor expressed in CHO-K1 cells assessed as increase in cAMP level incubated for 20 mins measured after 60 mins addition of cAMP detect reagent by HTRF analysis | ec50 | <0.0001 | uM |
| 5-[3-(2-methylbutan-2-yl)-1,2,4-oxadiazol-5-yl]-3-pyrazin-2-yl-11-oxa-3,4-diazatricyclo[6.2.1.02,6]undeca-2(6),4-diene | 1768789: Agonist activity at human CB1 receptor expressed in CHO-K1 cells assessed as increase in cAMP level incubated for 20 mins measured after 60 mins addition of cAMP detect reagent by HTRF analysis | ec50 | <0.0001 | uM |
| 1-[8-(2-chlorophenyl)-9-(4-chlorophenyl)purin-6-yl]-4-(ethylamino)piperidine-4-carboxamide | 411328: Antagonist activity against human CB1 receptor expressed in CHO-K1 cells by [35S]GTPgamma binding assay | ki | 0.0001 | uM |
| 5-(4-chlorophenyl)-1-(2,4-dichlorophenyl)-4-methyl-3-[1-(2-phenylpropan-2-yl)imidazol-4-yl]pyrazole | 446736: Antagonist activity at human CB1 receptor transfected in CHO-K1cells by GTPgamma[35S] binding assay | ki | 0.0001 | uM |
| 5-(4-chlorophenyl)-1-(2,4-dichlorophenyl)-4-methyl-N-piperidin-1-ylpyrazole-3-carboxamide | 464691: Inverse agonist activity at human cannabinoid CB1 receptor expressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP accumulation after 60 mins | ec50 | 0.0001 | uM |
| 2-[(1R,2R,5R)-5-hydroxy-2-(3-hydroxypropyl)cyclohexyl]-5-(2-methyloctan-2-yl)phenol | 464691: Inverse agonist activity at human cannabinoid CB1 receptor expressed in CHO cells assessed as inhibition of forskolin-stimulated cAMP accumulation after 60 mins | ic50 | 0.0001 | uM |
| 9-(hydroxymethyl)-6,6-dimethyl-3-(2-methyloctan-2-yl)benzo[c]chromen-1-ol | 49315: Binding affinity was determined for Cannabinoid receptor 1 | ki | 0.0001 | uM |
| N-[(2S,3S)-4-(4-chlorophenyl)-3-(3-cyanophenyl)butan-2-yl]-2-methyl-2-[[5-(trifluoromethyl)-2-pyridinyl]oxy]propanamide | 318864: Displacement of [3H]SR-141716 from human wild type CB1R expressed in CHO cells | ic50 | 0.0001 | uM |
| 2-(2-chlorophenyl)-3-(4-chlorophenyl)-6-(2,2,2-trifluoroethyl)pyrazolo[4,3-d]pyrimidin-7-one | 260297: Functional activity at human CB1 receptor transfected in CHOK1 cells by [35SGTP]gammaS assay | ki | 0.0001 | uM |
| 2-(2-chlorophenyl)-3-(4-chlorophenyl)-6-(2,2-difluoropropyl)pyrazolo[4,3-d]pyrimidin-7-one | 260297: Functional activity at human CB1 receptor transfected in CHOK1 cells by [35SGTP]gammaS assay | ki | 0.0001 | uM |
| [4-[2-(2,4-dichlorophenyl)-5-methyl-4-(piperidin-1-ylcarbamoyl)imidazol-1-yl]phenyl] 3,3,3-trifluoropropane-1-sulfonate | 1467903: Displacement of [3H]CP55940 from recombinant human CB1 receptor expressed in beta-galactosidase expressing CHOK1 cell membranes after 60 mins by scintillation spectrometry | ki | 0.0001 | uM |
| [4-[2-(2,4-dichlorophenyl)-5-methyl-4-(piperidin-1-ylcarbamoyl)imidazol-1-yl]phenyl] 4,4,4-trifluorobutane-1-sulfonate | 1467903: Displacement of [3H]CP55940 from recombinant human CB1 receptor expressed in beta-galactosidase expressing CHOK1 cell membranes after 60 mins by scintillation spectrometry | ki | 0.0001 | uM |
| [4-[2-(2,4-dichlorophenyl)-5-methyl-4-[[5-(trifluoromethyl)-2-pyridinyl]carbamoyl]imidazol-1-yl]phenyl] 3,3,3-trifluoropropane-1-sulfonate | 1467903: Displacement of [3H]CP55940 from recombinant human CB1 receptor expressed in beta-galactosidase expressing CHOK1 cell membranes after 60 mins by scintillation spectrometry | ki | 0.0001 | uM |
| [4-[2-(2,4-dichlorophenyl)-5-methyl-4-(piperidin-1-ylcarbamoyl)imidazol-1-yl]phenyl] butane-1-sulfonate | 1467903: Displacement of [3H]CP55940 from recombinant human CB1 receptor expressed in beta-galactosidase expressing CHOK1 cell membranes after 60 mins by scintillation spectrometry | ki | 0.0001 | uM |
| 1-(2-chlorophenyl)-5-(4-chlorophenyl)-4-methyl-3-[1-(2-phenylpropan-2-yl)imidazol-4-yl]pyrazole | 446736: Antagonist activity at human CB1 receptor transfected in CHO-K1cells by GTPgamma[35S] binding assay | ki | 0.0001 | uM |
| N-[2-(2-chlorophenyl)-3-(4-chlorophenyl)-5,6,7,8-tetrahydrooxepino[3,2-c]pyrazol-8-yl]propanamide | 673842: Antagonist activity at human CB1 receptor expressed in CHO-K1 cells assessed as inhibition of CP-55940-induced [35S]GTPgammaS binding incubated for 10 mins prior to CP-55940-challenge measured after 1 hr by beta counting | ki | 0.0001 | uM |
| propan-2-yl N-[2-(2-chlorophenyl)-3-(4-chlorophenyl)-5,6,7,8-tetrahydrooxepino[3,2-c]pyrazol-8-yl]carbamate | 673842: Antagonist activity at human CB1 receptor expressed in CHO-K1 cells assessed as inhibition of CP-55940-induced [35S]GTPgammaS binding incubated for 10 mins prior to CP-55940-challenge measured after 1 hr by beta counting | ki | 0.0001 | uM |
| 1-[2-(2-chlorophenyl)-3-(4-chlorophenyl)-5,6,7,8-tetrahydrooxepino[3,2-c]pyrazol-8-yl]-3-ethylurea | 673839: Displacement of [3H]SR141716A form human CB1 receptor expressed in HEK293 cells after 60 mins by beta counting | ki | 0.0001 | uM |
| (4Z,7Z)-N-(1-hydroxypropan-2-yl)-9-[3-[(2Z,5Z,8Z)-undeca-2,5,8-trienyl]oxiran-2-yl]nona-4,7-dienamide | 1350536: Agonist activity at N-terminal FLAG-tagged human CB1 receptor transfected in human HTLA cells assessed as induction of beta-arrestin-recruitment after 8 to 14 hrs by bright-glo luminescence based assay | ec50 | 0.0001 | uM |
| N-(3-pentyl-1,3-benzothiazol-2-ylidene)adamantane-1-carboxamide | 1569940: Displacement of [3H]CP55940 from recombinant human CB1R expressed in HEK293 cell membranes incubated for 90 mins by Cheng-Prusoff equation analysis | ki | 0.0001 | uM |
| N-(3-pentyl-1,3-benzothiazol-2-ylidene)naphthalene-1-carboxamide | 1569940: Displacement of [3H]CP55940 from recombinant human CB1R expressed in HEK293 cell membranes incubated for 90 mins by Cheng-Prusoff equation analysis | ki | 0.0001 | uM |
| [4-[2-(2,4-dichlorophenyl)-4-[(6-fluoro-3-pyridinyl)carbamoyl]-5-methylimidazol-1-yl]phenyl] 3,3,3-trifluoropropane-1-sulfonate | 1467903: Displacement of [3H]CP55940 from recombinant human CB1 receptor expressed in beta-galactosidase expressing CHOK1 cell membranes after 60 mins by scintillation spectrometry | ki | 0.0001 | uM |
| 2-(2-chlorophenyl)-1-(4-chlorophenyl)-5-ethyl-N-piperidin-1-ylimidazole-4-carboxamide | 443600: Antagonist activity at human CB1 receptor expressed in CHO cells assessed as inhibition of [3H]arachidonic acid release | kd | 0.0002 | uM |
| 7-[(6aR,10aR)-1-hydroxy-6,6,9-trimethyl-6a,7,10,10a-tetrahydrobenzo[c]chromen-3-yl]-7-methyloctanenitrile | 311037: Binding affinity to CB1 receptor | ki | 0.0002 | uM |
| 2-(2,4-dichlorophenyl)-5-methyl-N-piperidin-1-yl-1-[4-(4,4,4-trifluorobutoxy)phenyl]imidazole-4-carboxamide | 1467903: Displacement of [3H]CP55940 from recombinant human CB1 receptor expressed in beta-galactosidase expressing CHOK1 cell membranes after 60 mins by scintillation spectrometry | ki | 0.0002 | uM |
| [4-[2-(2,4-dichlorophenyl)-5-methyl-4-(piperidin-1-ylcarbamoyl)imidazol-1-yl]phenyl] 3-methylbutane-1-sulfonate | 1467903: Displacement of [3H]CP55940 from recombinant human CB1 receptor expressed in beta-galactosidase expressing CHOK1 cell membranes after 60 mins by scintillation spectrometry | ki | 0.0002 | uM |
| (4Z,7Z)-N-(3-hydroxypropyl)-9-[3-[(2Z,5Z,8Z)-undeca-2,5,8-trienyl]oxiran-2-yl]nona-4,7-dienamide | 1350536: Agonist activity at N-terminal FLAG-tagged human CB1 receptor transfected in human HTLA cells assessed as induction of beta-arrestin-recruitment after 8 to 14 hrs by bright-glo luminescence based assay | ec50 | 0.0002 | uM |
| N-[1-[8-(2-chlorophenyl)-9-(4-chlorophenyl)purin-6-yl]piperidin-4-yl]-3,3-dimethylbutanamide | 1588558: Displacement of [3H]-CP55940 from human CB1 receptor expressed in CHO cell membranes | ki | 0.0002 | uM |
| N-butyl-6-(4-chlorophenyl)benzo[b][1,4]benzothiazepine-3-carboxamide | 1798964: CB Receptor Radioligand Binding Assay (Ki) from Article 10.1021/jm801534c: “Synthesis and evaluation of dibenzothiazepines: a novel class of selective cannabinoid-1 receptor inverse agonists.” | ki | 0.0002 | uM |
| (6aR,10aR)-3-(2-hexyl-1,3-dithiolan-2-yl)-6,6,9-trimethyl-6a,7,10,10a-tetrahydrobenzo[c]chromen-1-ol | 303924: Binding affinity at CB1 receptor | ki | 0.0003 | uM |
| N-[4-(4-chlorophenyl)-3-(3-cyanophenyl)butan-2-yl]-2-methyl-2-[[5-(trifluoromethyl)-2-pyridinyl]oxy]propanamide | 352285: Antagonist activity against human recombinant cannabinoid-1 receptor | ic50 | 0.0003 | uM |
| 5-(4-chlorophenyl)-N’-(4-chlorophenyl)sulfonyl-4-phenyl-3,4-dihydropyrazole-2-carboximidamide | 49329: Antagonistic activity towards cannabinoid receptor 1 expressed as [3H]Arachidonic acid release in CHO cells | kd | 0.0003 | uM |
| [4-[2-(2,4-dichlorophenyl)-5-methyl-4-(piperidin-1-ylcarbamoyl)imidazol-1-yl]phenyl] propane-1-sulfonate | 1467903: Displacement of [3H]CP55940 from recombinant human CB1 receptor expressed in beta-galactosidase expressing CHOK1 cell membranes after 60 mins by scintillation spectrometry | ki | 0.0003 | uM |
| (2R,4R)-9-[(4-fluorophenyl)methyl]-N-(2-phenylpropan-2-yl)-8,9-diazatricyclo[4.3.0.02,4]nona-1(6),7-diene-7-carboxamide | 1175746: Agonist activity at human recombinant CB1 receptor expressed in CHOK1 cells assessed as cAMP accumulation by HTRF method | ec50 | 0.0003 | uM |
| methyl N-[2-(2-chlorophenyl)-3-(4-chlorophenyl)-5,6,7,8-tetrahydrooxepino[3,2-c]pyrazol-8-yl]carbamate | 673839: Displacement of [3H]SR141716A form human CB1 receptor expressed in HEK293 cells after 60 mins by beta counting | ki | 0.0003 | uM |
| (4-methoxyphenyl)-[1-(morpholin-4-ylmethyl)-2,3-dihydro-1H-pyrrolo[1,2-a]indol-4-yl]methanone | 383283: Agonist activity at CB1 receptor | ic50 | 0.0003 | uM |
| 3-[1-[8-(2-chlorophenyl)-9-(4-chlorophenyl)purin-6-yl]piperidin-4-yl]-1-(2-methoxyethyl)-1-methylurea | 1567036: Displacement of [3H]CP55940 from human CB1 receptor expressed in HEK293 cell membranes | ki | 0.0003 | uM |
| N-[(2S)-1-amino-3,3-dimethyl-1-oxobutan-2-yl]-1-butylindazole-3-carboxamide | 1853934: Displacement of [3H]-CP55940 from human CB1 receptor expressed in human HEK293-EBNA cells incubated for 60 mins by radioligand competitive binding assay based liquid scintillation counter | ki | 0.0003 | uM |
| 1-(2,4-dichlorophenyl)-N-piperidin-1-yl-4-[(pyrrolidin-1-ylsulfonylamino)methyl]-5-[5-[2-[4-(trifluoromethyl)phenyl]ethynyl]thiophen-2-yl]pyrrole-3-carboxamide | 1645904: Antagonist activity at human cannabinoid CB1 receptor | ki | 0.0003 | uM |
| 3-[6-(2-chlorophenyl)-5-(4-chlorophenyl)-2-(2,2-dimethylpropanoyl)furo[2,3-b]pyridin-3-yl]-1,1-dimethylurea | 476812: Inhibition of human CB1 receptor | ic50 | 0.0004 | uM |
| (6aR,10aR)-3-(1-hexylcyclopropyl)-6,6,9-trimethyl-6a,7,10,10a-tetrahydrobenzo[c]chromen-1-ol | 303924: Binding affinity at CB1 receptor | ki | 0.0004 | uM |
| (6aR,10aR)-3-(6-bromo-2-methylhexan-2-yl)-6,6,9-trimethyl-6a,7,10,10a-tetrahydrobenzo[c]chromen-1-ol | 311037: Binding affinity to CB1 receptor | ki | 0.0004 | uM |
| (6aR,10aR)-3-(1-hexylcyclopentyl)-6,6,9-trimethyl-6a,7,10,10a-tetrahydrobenzo[c]chromen-1-ol | 303924: Binding affinity at CB1 receptor | ki | 0.0004 | uM |
| 5-(4-chlorophenyl)-4-phenyl-N’-(2,4,6-trimethylphenyl)sulfonyl-3,4-dihydropyrazole-2-carboximidamide | 49329: Antagonistic activity towards cannabinoid receptor 1 expressed as [3H]Arachidonic acid release in CHO cells | kd | 0.0004 | uM |
| 5-(4-chlorophenyl)-N’-methyl-4-phenyl-N-(2,4,6-trimethylphenyl)sulfonyl-3,4-dihydropyrazole-2-carboximidamide | 49329: Antagonistic activity towards cannabinoid receptor 1 expressed as [3H]Arachidonic acid release in CHO cells | kd | 0.0004 | uM |
| methyl (2S)-2-[[1-(5-fluoropentyl)indole-3-carbonyl]amino]-3,3-dimethylbutanoate | 2095059: Agonist activity at HA-tagged human CB1 receptor stably transfected in AtT20 cells incubated for 60 mins by FLIPR membrane potential assay | ec50 | 0.0004 | uM |
| N-[1-[8-(2-chlorophenyl)-9-(4-chlorophenyl)purin-6-yl]piperidin-4-yl]-2-fluorobenzenesulfonamide | 1588558: Displacement of [3H]-CP55940 from human CB1 receptor expressed in CHO cell membranes | ki | 0.0004 | uM |
CTD chemical–gene interactions
147 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| 3-(2-hydroxy-4-(1,1-dimethylheptyl)phenyl)-4-(3-hydroxypropyl)cyclohexanol | decreases secretion, affects cotreatment, decreases reaction, increases reaction, increases abundance (+5 more) | 31 |
| Dronabinol | affects reaction, affects response to substance, affects cotreatment, decreases reaction, affects expression (+6 more) | 19 |
| Rimonabant | increases reaction, increases abundance, affects reaction, increases activity, increases expression (+4 more) | 13 |
| (3R)-((2,3-dihydro-5-methyl-3-((4-morpholinyl)methyl)pyrrolo-(1,2,3-de)-1,4-benzoxazin-6-yl)(1-naphthalenyl))methanone | affects localization, affects reaction, increases activity, decreases reaction, increases degradation (+3 more) | 10 |
| 1-pentyl-3-(1-naphthoyl)indole | affects binding, decreases reaction, increases activity, increases chemical synthesis, increases reaction | 7 |
| Valproic Acid | decreases expression, increases expression | 7 |
| Cannabidiol | decreases reaction, affects binding, affects cotreatment, increases reaction, increases expression (+4 more) | 6 |
| methyl 2-(1-(4-fluorobenzyl)-1H-indazole-3-carboxamido)-3-methylbutanoate | affects binding, decreases reaction, increases reaction, increases activity | 4 |
| anandamide | decreases reaction, increases activity, affects activity, affects localization, increases reaction (+2 more) | 4 |
| 4-ethylnaphthalen-1-yl-(1-pentylindol-3-yl)methanone | decreases reaction, increases reaction, affects binding, increases activity | 4 |
| Colforsin | affects response to substance, affects cotreatment, increases expression, affects binding, decreases reaction (+2 more) | 4 |
| 1-pentyl-1H-indole-3-carboxylic acid 8-quinolinyl ester | decreases reaction, increases activity, increases chemical synthesis, increases reaction, affects binding | 3 |
| 1-(5-fluoropentyl)-3-(4-methyl-1-naphthoyl)indole | affects binding, decreases reaction, increases activity, increases chemical synthesis, increases reaction | 3 |
| N-(1-adamantyl)-1-pentylindazole-3-carboxamide | affects binding, decreases reaction, increases activity, increases chemical synthesis, increases expression | 3 |
| (4-ethyl-1-naphthalenyl)(1-(5-fluoropentyl)-1H-indol-3-yl)methanone | affects binding, decreases reaction, increases activity, increases chemical synthesis, increases reaction | 3 |
| AB-FUBINACA | affects binding, increases activity, decreases reaction | 3 |
| 5F-ADB cannabinoid | decreases reaction, affects binding, increases activity, decreases expression | 3 |
| HU 211 | increases response to substance, affects binding, increases activity, decreases reaction | 3 |
| (1-pentyl-1H-indol-3-yl)(2,2,3,3-tetramethylcyclopropyl)methanone | affects binding, increases activity, decreases reaction, increases chemical synthesis, increases reaction | 3 |
| Cyclic AMP | affects binding, decreases reaction, increases activity, increases chemical synthesis, increases abundance | 3 |
| Cocaine | affects response to substance | 3 |
| Estradiol | affects cotreatment, decreases expression, increases expression | 3 |
| Guanosine 5’-O-(3-Thiotriphosphate) | affects binding, increases reaction | 3 |
| Pertussis Toxin | decreases reaction, increases activity | 3 |
| N-(1-amino-3-methyl-1-oxobutan-2-yl)-1-pentyl-1H-indazole-3-carboxamide | affects binding, increases activity, decreases reaction | 2 |
| N-(1-amino-3-methyl-1-oxobutan-2-yl)-1-(5-fluoropentyl)-1H-indazole-3-carboxamide | affects binding, increases activity | 2 |
| N-(adamantan-1-yl)-1-(5-fluoropentyl)-1H-indole-3-carboxamide | affects binding, decreases reaction, increases activity, increases chemical synthesis | 2 |
| N-(1-(aminocarbonyl)-2-methylpropyl)-1-(cyclohexylmethyl)-1H-indazole-3-carboxamide | affects binding, increases activity | 2 |
| methyl 2-(1-(cyclohexylmethyl)-1H-indole-3-carboxamido)-3,3-dimethylbutanoate | affects binding, increases activity, decreases reaction | 2 |
| 2-(4-methoxyphenyl)-1-(1-pentyl-indol-3-yl)methanone | increases activity, decreases reaction, increases chemical synthesis, affects binding | 2 |
ChEMBL screening assays
1559 unique, capped per target: 985 binding, 524 functional, 47 admet, 3 toxicity
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1838787 | Binding | Binding affinity to CB receptor in human cortex membranes | Conformationally constrained analogs of BAY 59-3074 as novel cannabinoid receptor ligands. — Bioorg Med Chem Lett |
| CHEMBL5364352 | Functional | Agonist activity at CB1/CB2 (unknown origin) receptor expressed in HEK293 cells assessed as inhibition of forskolin-stimulated cAMP accumulation incubated for 2 hrs by microplate reader analysis | Cannabidiol Analogue CIAC001 for the Treatment of Morphine-Induced Addiction by Targeting PKM2. — J Med Chem |
| CHEMBL3866931 | ADMET | Displacement of [3H]-CP-55940 from human CB1 receptor expressed in HEK293 cell membranes after 90 mins by radioligand binding assay | Discovery of novel Tetrahydrobenzo[b]thiophene and pyrrole based scaffolds as potent and selective CB2 receptor ligands: The structural elements controlling binding affinity, selectivity and functionality. — Eur J Med Chem |
Cellosaurus cell lines
20 cell lines: 7 transformed cell line, 7 spontaneously immortalized cell line, 6 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_C0SB | ACTOne CB1 | Transformed cell line | Female |
| CVCL_E0AG | Ubigene HeLa CNR1 KO | Cancer cell line | Female |
| CVCL_E4J0 | Genomeditech CHO-K1 H_CNR1(CB1) | Spontaneously immortalized cell line | Female |
| CVCL_E6TT | Genomeditech HEK-293 H_CNR1(CB1) | Transformed cell line | Female |
| CVCL_F1TG | HyCyte SH-SY5Y KO-hCNR1 | Cancer cell line | Female |
| CVCL_F2AK | CHO-K1 (+Galpha16) AequoScreen Cannabinoid CB1 | Spontaneously immortalized cell line | Female |
| CVCL_H409 | CHO-K1/CB1/Galpha15 | Spontaneously immortalized cell line | Female |
| CVCL_KU95 | cAMP Hunter CHO-K1 CNR1 Gi | Spontaneously immortalized cell line | Female |
| CVCL_KW72 | PathHunter CHO-K1 CNR1 beta-arrestin | Spontaneously immortalized cell line | Female |
| CVCL_SJ42 | HAP1 CNR1 (-) 1 | Cancer cell line | Male |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Targeted by drugs: Cannabidiol, Cannabinol, Dronabinol, Lenabasum, Nabilone, Nabiximols, Otenabant, Rimonabant, Taranabant