COG1
gene geneOn this page
Also known as KIAA1381
Summary
COG1 (component of oligomeric golgi complex 1, HGNC:6545) is a protein-coding gene on chromosome 17q25.1, encoding Conserved oligomeric Golgi complex subunit 1 (Q8WTW3). Required for normal Golgi function. It is a selective cancer dependency (DepMap: 52.8% of cell lines).
The protein encoded by this gene is one of eight proteins (Cog1-8) which form a Golgi-localized complex (COG) required for normal Golgi morphology and function. It is thought that this protein is required for steps in the normal medial and trans Golgi-associated processing of glycoconjugates and plays a role in the organization of the Golgi-localized complex.
Source: NCBI Gene 9382 — RefSeq curated summary.
At a glance
- Gene–disease (curated): COG1-congenital disorder of glycosylation (Definitive, GenCC)
- Clinical variants (ClinVar): 519 total — 14 pathogenic, 7 likely-pathogenic (top 6% of genes corpus-wide)
- GTEx eGene: eQTL in 19 tissues, sQTL in 18 (q < 0.05)
- Phenotypes (HPO): 91
- Cancer dependency (DepMap): dependent in 52.8% of screened cell lines
- Dosage sensitivity (ClinGen): haploinsufficiency autosomal recessive, triplosensitivity unscored
- Constraint (gnomAD): pLI 0.00 (LoF-tolerant), LOEUF 0.72 (unconstrained)
- MANE Select transcript:
NM_018714
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:6545 |
| Approved symbol | COG1 |
| Name | component of oligomeric golgi complex 1 |
| Location | 17q25.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | KIAA1381 |
| Ensembl gene | ENSG00000166685 |
| Ensembl biotype | protein_coding |
| OMIM | 606973 |
| Entrez | 9382 |
Gene structure
Transcript identifiers
Ensembl transcripts: 34 — 18 nonsense_mediated_decay, 13 protein_coding, 3 retained_intron
MANE Select: ENST00000299886
Transcript support level (Ensembl TSL; 1 = fully mRNA-supported): TSL 1: 2, TSL 2: 4, TSL 3: 3
ENST00000299886, ENST00000438720, ENST00000577238, ENST00000577844, ENST00000580271, ENST00000582512, ENST00000582587, ENST00000582672, ENST00000582973, ENST00000876963, ENST00000876964, ENST00000876965, ENST00000923183, ENST00000947884, ENST00000947885, ENST00000992734, ENST00000992735, ENST00000992736, ENST00001025276, ENST00001025277, ENST00001025280, ENST00001025281, ENST00001025282, ENST00001025284, ENST00001025285, ENST00001079998, ENST00001109060, ENST00001109061, ENST00001109062, ENST00001109063, ENST00001109064, ENST00001113514, ENST00001123559, ENST00001141917
RefSeq mRNA: 1 — MANE Select: NM_018714
NM_018714
CCDS: CCDS11692
Canonical transcript exons
ENST00000299886 — 14 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001105601 | 73206708 | 73206817 |
| ENSE00001105604 | 73197226 | 73197396 |
| ENSE00001105614 | 73196507 | 73196751 |
| ENSE00001105619 | 73203632 | 73203793 |
| ENSE00001105631 | 73201109 | 73201900 |
| ENSE00001105640 | 73205553 | 73205680 |
| ENSE00001105647 | 73203000 | 73203146 |
| ENSE00001105651 | 73196900 | 73197081 |
| ENSE00001136834 | 73200566 | 73200776 |
| ENSE00001136838 | 73199865 | 73200021 |
| ENSE00002719633 | 73193055 | 73193384 |
| ENSE00003501326 | 73207181 | 73207256 |
| ENSE00003525871 | 73206154 | 73206262 |
| ENSE00003601993 | 73208314 | 73208507 |
Expression profiles
Bgee: expression breadth ubiquitous, 252 present calls, max score 95.76.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 22.9904 / max 128.3385, expressed in 1810 samples.
Highest expression (Bgee): hemisphere of cerebellum, cerebellar hemisphere, apex of heart, cerebellar cortex, frontal lobe.
Genetic regulation across tissues (GTEx eQTL / sQTL)
COG1 is an eGene in GTEx v10 — its expression is genetically regulated (eQTL) in 19 tissues and its splicing (sQTL) in 18 (q < 0.05). Strongest associations first; slope = normalized effect of the lead variant’s alternative allele.
showing 20 of 37 significant tissue × QTL associations:
| Tissue | QTL | q-value | Slope | Lead variant |
|---|---|---|---|---|
| Testis | eqtl | 4.2e-22 | +0.49 | 17:73193924:C:T |
| Thyroid | eqtl | 4.0e-18 | +0.28 | 17:73218354:T:C |
| Cells Cultured fibroblasts | eqtl | 3.0e-17 | +1.08 | 17:73198466:G:T |
| Muscle Skeletal | eqtl | 4.9e-17 | +0.23 | 17:73256884:G:A |
| Whole Blood | eqtl | 7.7e-17 | -0.16 | 17:73192144:C:T |
| Brain Frontal Cortex BA9 | sqtl | 1.8e-15 | -1.91 | 17:73205817:G:A |
| Brain Nucleus accumbens basal ganglia | sqtl | 2.9e-13 | -2.06 | 17:73198067:G:GC |
| Brain Caudate basal ganglia | sqtl | 3.2e-11 | -1.59 | 17:73194333:C:T |
| Brain Cortex | sqtl | 1.9e-10 | -1.57 | 17:73198067:G:GC |
| Brain Anterior cingulate cortex BA24 | sqtl | 5.5e-09 | +1.91 | 17:73181564:G:A |
| Esophagus Mucosa | eqtl | 6.9e-09 | +0.20 | 17:73179889:G:A |
| Brain Putamen basal ganglia | sqtl | 1.3e-08 | -1.89 | 17:73223884:A:G |
| Brain Cerebellum | sqtl | 1.7e-07 | -1.02 | 17:73205817:G:A |
| Pancreas | eqtl | 5.9e-07 | +0.21 | 17:73256884:G:A |
| Brain Cerebellar Hemisphere | sqtl | 2.4e-06 | -0.65 | 17:73205817:G:A |
| Heart Atrial Appendage | eqtl | 2.1e-05 | -0.20 | 17:73192144:C:T |
| Heart Left Ventricle | eqtl | 2.2e-05 | -0.13 | 17:73192144:C:T |
| Testis | sqtl | 2.2e-05 | -1.01 | 17:73205817:G:A |
| Brain Frontal Cortex BA9 | eqtl | 3.4e-05 | +0.18 | 17:73218611:G:A |
| Brain Cortex | eqtl | 4.2e-05 | +0.18 | 17:73218611:G:A |
FANTOM5 promoters
1 alternative TSS:
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 162563 | 22.9904 | 1810 |
Top tissues by expression
showing 100 of 260 tissues by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right hemisphere of cerebellum | UBERON:0014890 | 95.76 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 95.68 | gold quality |
| apex of heart | UBERON:0002098 | 95.64 | gold quality |
| cerebellar cortex | UBERON:0002129 | 95.59 | gold quality |
| right frontal lobe | UBERON:0002810 | 95.05 | gold quality |
| cerebellum | UBERON:0002037 | 95.00 | gold quality |
| adenohypophysis | UBERON:0002196 | 94.91 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 94.83 | gold quality |
| nucleus accumbens | UBERON:0001882 | 94.69 | gold quality |
| pituitary gland | UBERON:0000007 | 94.54 | gold quality |
| prefrontal cortex | UBERON:0000451 | 94.34 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 94.25 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 94.00 | gold quality |
| caudate nucleus | UBERON:0001873 | 93.83 | gold quality |
| body of pancreas | UBERON:0001150 | 93.72 | gold quality |
| heart left ventricle | UBERON:0002084 | 93.70 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 93.61 | gold quality |
| gastrocnemius | UBERON:0001388 | 93.55 | gold quality |
| right uterine tube | UBERON:0001302 | 93.54 | gold quality |
| amygdala | UBERON:0001876 | 93.48 | gold quality |
| putamen | UBERON:0001874 | 93.35 | gold quality |
| cardiac ventricle | UBERON:0002082 | 93.30 | gold quality |
| frontal cortex | UBERON:0001870 | 93.27 | gold quality |
| frontal lobe | UBERON:0016525 | 93.27 | gold quality |
| muscle of leg | UBERON:0001383 | 93.08 | gold quality |
| endocervix | UBERON:0000458 | 92.99 | gold quality |
| neocortex | UBERON:0001950 | 92.95 | gold quality |
| right ovary | UBERON:0002118 | 92.90 | gold quality |
| left ovary | UBERON:0002119 | 92.69 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 92.48 | gold quality |
| transverse colon | UBERON:0001157 | 92.40 | gold quality |
| forebrain | UBERON:0001890 | 92.39 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 92.31 | gold quality |
| brain | UBERON:0000955 | 92.30 | gold quality |
| body of uterus | UBERON:0009853 | 92.28 | gold quality |
| right atrium auricular region | UBERON:0006631 | 92.26 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 92.25 | gold quality |
| left adrenal gland | UBERON:0001234 | 92.20 | gold quality |
| hypothalamus | UBERON:0001898 | 92.18 | gold quality |
| metanephros cortex | UBERON:0010533 | 92.17 | gold quality |
| cerebral cortex | UBERON:0000956 | 92.16 | gold quality |
| rectum | UBERON:0001052 | 92.14 | gold quality |
| tibialis anterior | UBERON:0001385 | 92.14 | silver quality |
| right adrenal gland cortex | UBERON:0035827 | 92.14 | gold quality |
| right adrenal gland | UBERON:0001233 | 92.03 | gold quality |
| body of stomach | UBERON:0001161 | 92.02 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 92.00 | gold quality |
| lower esophagus | UBERON:0013473 | 91.99 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 91.95 | gold quality |
| heart | UBERON:0000948 | 91.88 | gold quality |
| cardiac atrium | UBERON:0002081 | 91.87 | gold quality |
| mucosa of stomach | UBERON:0001199 | 91.86 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 91.78 | gold quality |
| tibial nerve | UBERON:0001323 | 91.78 | gold quality |
| ectocervix | UBERON:0012249 | 91.75 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 91.72 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 91.71 | gold quality |
| adrenal cortex | UBERON:0001235 | 91.69 | gold quality |
| pancreas | UBERON:0001264 | 91.67 | gold quality |
| popliteal artery | UBERON:0002250 | 91.64 | gold quality |
| tibial artery | UBERON:0007610 | 91.64 | gold quality |
| adrenal gland | UBERON:0002369 | 91.43 | gold quality |
| kidney epithelium | UBERON:0004819 | 91.43 | silver quality |
| Ammon’s horn | UBERON:0001954 | 91.39 | gold quality |
| skin of leg | UBERON:0001511 | 91.36 | gold quality |
| islet of Langerhans | UBERON:0000006 | 91.32 | gold quality |
| left ventricle myocardium | UBERON:0006566 | 91.31 | silver quality |
| temporal lobe | UBERON:0001871 | 91.29 | gold quality |
| stromal cell of endometrium | CL:0002255 | 91.24 | gold quality |
| aorta | UBERON:0000947 | 91.21 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 91.21 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 91.16 | gold quality |
| thyroid gland | UBERON:0002046 | 91.15 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 90.92 | gold quality |
| minor salivary gland | UBERON:0001830 | 90.88 | gold quality |
| right lung | UBERON:0002167 | 90.87 | gold quality |
| right coronary artery | UBERON:0001625 | 90.86 | gold quality |
| ascending aorta | UBERON:0001496 | 90.81 | gold quality |
| small intestine | UBERON:0002108 | 90.80 | gold quality |
| thoracic aorta | UBERON:0001515 | 90.78 | gold quality |
| left uterine tube | UBERON:0001303 | 90.74 | gold quality |
| colon | UBERON:0001155 | 90.72 | gold quality |
| descending thoracic aorta | UBERON:0002345 | 90.69 | gold quality |
| left coronary artery | UBERON:0001626 | 90.58 | gold quality |
| deltoid | UBERON:0001476 | 90.57 | silver quality |
| spleen | UBERON:0002106 | 90.57 | gold quality |
| large intestine | UBERON:0000059 | 90.47 | gold quality |
| intestine | UBERON:0000160 | 90.41 | gold quality |
| stomach | UBERON:0000945 | 90.41 | gold quality |
| uterine cervix | UBERON:0000002 | 90.34 | gold quality |
| skin of abdomen | UBERON:0001416 | 90.29 | gold quality |
| granulocyte | CL:0000094 | 90.28 | gold quality |
| fundus of stomach | UBERON:0001160 | 90.25 | gold quality |
| right lobe of liver | UBERON:0001114 | 90.24 | gold quality |
| subcutaneous adipose tissue | UBERON:0002190 | 90.24 | gold quality |
| coronary artery | UBERON:0001621 | 90.13 | gold quality |
| ovary | UBERON:0000992 | 90.05 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 90.01 | gold quality |
| prostate gland | UBERON:0002367 | 89.99 | gold quality |
| sural nerve | UBERON:0015488 | 89.94 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 4.71 |
| E-MTAB-10137 | no | 516.06 |
HPA expression
RNA tissue specificity: Low tissue specificity
showing 60 of 80 HPA tissues / cells by nTPM:
| Tissue / cell | Axis | nTPM | Protein (IHC) |
|---|---|---|---|
| Nucleus accumbens | tissue | 49.9 | |
| Hippocampus | tissue | 46.5 | medium |
| Postcentral gyrus | tissue | 46.0 | |
| Skeletal muscle | tissue | 38.9 | medium |
| Locus coeruleus | tissue | 37.1 | |
| Cerebral cortex | tissue | 36.3 | medium |
| Somatosensory cortex | tissue | 36.3 | |
| Tongue | tissue | 33.2 | |
| Pituitary gland | tissue | 32.3 | |
| Thalamus | tissue | 32.2 | |
| Heart muscle | tissue | 31.2 | low |
| Occipital cortex | tissue | 30.6 | |
| Superior colliculi | tissue | 30.3 | |
| Motor cortex | tissue | 30.2 | |
| Hippocampal formation | tissue | 30.2 | |
| Choroid plexus | tissue | 29.8 | |
| Cerebellum | tissue | 28.9 | high |
| Midbrain | tissue | 28.8 | |
| Caudate putamen | tissue | 28.5 | |
| Prefrontal cortex | tissue | 28.3 | |
| Pons | tissue | 28.2 | |
| Temporal cortex | tissue | 27.8 | |
| Medulla oblongata | tissue | 27.7 | |
| Hypothalamus | tissue | 27.3 | |
| Entorhinal cortex | tissue | 27.2 | |
| Retrosplenial and cingulate cortex | tissue | 26.9 | |
| Substantia nigra | tissue | 26.5 | |
| Retrosplenial cortex | tissue | 26.4 | |
| Spinal cord | tissue | 26.1 | |
| Insular cortex | tissue | 26.1 | |
| Corpus callosum | tissue | 25.9 | |
| Basal ganglia | tissue | 25.3 | medium |
| Frontal cortex | tissue | 25.0 | |
| Putamen | tissue | 25.0 | |
| Periaqueductal gray | tissue | 25.0 | |
| Septum | tissue | 25.0 | |
| Ventral forebrain | tissue | 24.9 | |
| Retina | tissue | 23.5 | |
| Amygdala | tissue | 23.5 | |
| Pancreas | tissue | 21.3 | medium |
| Olfactory bulb | tissue | 21.3 | |
| Rectum | tissue | 18.4 | medium |
| Ovary | tissue | 18.0 | high |
| Cervix | tissue | 17.8 | medium |
| Salivary gland | tissue | 17.8 | high |
| Adrenal gland | tissue | 17.8 | high |
| Smooth muscle | tissue | 17.6 | low |
| Vagina | tissue | 16.7 | medium |
| Parathyroid gland | tissue | 16.6 | low |
| Epididymis | tissue | 16.6 | medium |
| Seminal vesicle | tissue | 16.5 | high |
| Colon | tissue | 16.3 | high |
| Fallopian tube | tissue | 16.2 | high |
| Endometrium 1 | tissue | 16.1 | high |
| Duodenum | tissue | 15.3 | high |
| Prostate | tissue | 15.2 | high |
| Bone marrow | tissue | 15.1 | high |
| Testis | tissue | 14.9 | high |
| Skin 1 | tissue | 14.4 | medium |
| Stomach 1 | tissue | 14.2 | medium |
Brain sub-regions (HPA Brain Atlas): detected in 192; highest nTPM — Perirhinal gyrus (67.3), Olfactory area (64.7), Olfactory tubercle (61.2), Nucleus of the diagonal band (60.1), Temporal pole (57.1).
Regulation
Is transcription factor: no
Functional genomics
gnomAD constraint: pLI 6.1e-11, LOEUF 0.718, missense Z 1.13 — population loss-of-function intolerance (pLI ≥ 0.9 = LoF-intolerant; lower LOEUF = more constrained). gnomAD
Regional missense constraint (gnomAD RMC): no regional variation along ENST00000299886 — one region, missense o/e 0.94.
ClinGen dosage: haploinsufficiency 30 (autosomal recessive), triplosensitivity Not yet evaluated (unscored). ClinGen Gene Dosage Map
DepMap (CRISPR cell-line fitness): dependent in 52.8% of screened cell lines.
Most-dependent cell lines (DepMap gene-effect, lower = stronger; ≤ −0.5 shown): SNB75 (-1.372), 769-P (-1.297), KARPAS-422 (-1.246), SNU-16 (-1.237), OAW42 (-1.237), COV362 (-1.231), 786-O (-1.228), MPP 89 (-1.214), LOU-NH91 (-1.164), KMS-34 (-1.162), RT-112 (-1.153), SU-DHL-10 (-1.145), NCI-H2452 (-1.129), NCI-H2882 (-1.116), huH-1 (-1.077).
Literature-anchored findings (GeneRIF, showing 5)
- Sec34 is implicated in traffic from the endoplasmic reticulum to the Golgi and exists in a complex with GTC-90 and ldlBp (PMID:11929878)
- These findings support the proposal that COG is directly involved in controlling vesicular retrograde transport of Golgi resident proteins throughout the Golgi apparatus. (PMID:16857184)
- A novel mutation in COG1 was found in two patients with a cerebrocostomandibular-like syndrome. (PMID:19008299)
- This study reports a novel set of Dengue virus (DENV) NS1-interacting host cell proteins in the HepG2 cell line and proposes possible roles for human NEK2, TAO1, and COG1 in DENV infection. (PMID:27108190)
- Chronic renal patients with more atherogenic lipoprotein LDL B phenotype are in advanced state of oxidative stress compared with control subjects. (PMID:27412679)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | cog1 | ENSDARG00000105131 |
| mus_musculus | Cog1 | ENSMUSG00000018661 |
| rattus_norvegicus | Cog1 | ENSRNOG00000002795 |
| drosophila_melanogaster | Cog1 | FBGN0037998 |
| caenorhabditis_elegans | cogc-1 | WBGENE00003258 |
Mouse-model phenotypes
Observed phenotypes of the mouse ortholog (MGI:1333873) from MGI (Alliance of Genome Resources) — knockout/mutant phenotypes, ranked by annotation count. 4 distinct phenotype terms.
| Mouse phenotype (MP) | Records |
|---|---|
| abnormal embryo implantation | 1 |
| abnormal inner cell mass morphology | 1 |
| embryonic lethality between implantation and somite formation, complete penetrance | 1 |
| preweaning lethality, complete penetrance | 1 |
Genomic neighbors (locus context)
Genes flanking this one on the chromosome (NCBI/Entrez gene neighborhood). Positional context only — some neighbors share regulatory elements (bidirectional promoters, antisense/overlapping transcripts), but chromosomal adjacency is not itself a functional relationship (see Interactions for that).
| Symbol | Type | Entrez |
|---|---|---|
| SDK2-AS1 | ncRNA | 101928251 |
| CDC42EP4 | protein-coding | 23580 |
| SDK2 | protein-coding | 54549 |
| MTNAP1 | protein-coding | 55028 |
| CPSF4L | protein-coding | 642843 |
| VCF1 | protein-coding | 84923 |
| SSTR2 | protein-coding | 6752 |
| SLC39A11 | protein-coding | 201266 |
Protein
Protein identifiers
Conserved oligomeric Golgi complex subunit 1 — Q8WTW3 (reviewed: Q8WTW3)
Alternative names: Component of oligomeric Golgi complex 1
All UniProt accessions (6): Q8WTW3, E9PBL8, J3KRP4, J3KSY3, J3QKY9, J3QLT5
UniProt curated annotations — full annotation on UniProt →
Function. Required for normal Golgi function.
Subunit / interactions. Component of the conserved oligomeric Golgi complex which is composed of eight different subunits and is required for normal Golgi morphology and localization.
Subcellular location. Golgi apparatus membrane.
Disease relevance. Congenital disorder of glycosylation 2G (CDG2G) [MIM:611209] A multisystem disorder caused by a defect in glycoprotein biosynthesis and characterized by under-glycosylated serum glycoproteins. Congenital disorders of glycosylation result in a wide variety of clinical features, such as defects in the nervous system development, psychomotor retardation, dysmorphic features, hypotonia, coagulation disorders, and immunodeficiency. The broad spectrum of features reflects the critical role of N-glycoproteins during embryonic development, differentiation, and maintenance of cell functions. Clinical features of CDG2G include failure to thrive, generalized hypotonia, growth retardation and mild psychomotor retardation. CDG2G is biochemically characterized by a defect in O-glycosylation as well as N-glycosylation. The disease is caused by variants affecting the gene represented in this entry.
Similarity. Belongs to the COG1 family.
RefSeq proteins (1): NP_061184* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR033370 | COG1 | Family |
Pfam: PF08700
UniProt features (7 total): sequence variant 3, modified residue 2, initiator methionine 1, chain 1
Structure
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q8WTW3-F1 | 77.82 | 0.40 |
Human Protein Atlas
Protein class: Predicted intracellular proteins, Disease related genes, Human disease related genes, Congenital disorders of metabolism, Congenital disorders of glycan/glycoprotein metabolism, Essential proteins
Protein evidence: Evidence at protein level
Antibody reliability (HPA): IH approved
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (2)
| Type | Positions |
|---|---|
| N-acetylalanine | 2 |
| Phosphoserine | 7 |
Function
Pathways and Gene Ontology
Reactome pathways
4 curated (TAS) of 12; 1 disease pathways. Curated-first; evidence = TAS (manually curated) vs IEA (electronic inference).
12 pathways:
| ID | Pathway | Evidence |
|---|---|---|
| R-HSA-9918481 | Dengue Virus-Host Interactions ⚕ | curated |
| R-HSA-6807878 | COPI-mediated anterograde transport | curated |
| R-HSA-6811438 | Intra-Golgi traffic | curated |
| R-HSA-6811440 | Retrograde transport at the Trans-Golgi-Network | curated |
| R-HSA-446203 | Asparagine N-linked glycosylation | — |
| R-HSA-199977 | ER to Golgi Anterograde Transport | — |
| R-HSA-6811442 | Intra-Golgi and retrograde Golgi-to-ER traffic | — |
| R-HSA-199991 | Membrane Trafficking | — |
| R-HSA-392499 | Metabolism of proteins | — |
| R-HSA-597592 | Post-translational protein modification | — |
| R-HSA-948021 | Transport to the Golgi and subsequent modification | — |
| R-HSA-5653656 | Vesicle-mediated transport | — |
MSigDB gene sets: 289 (showing top):
GRAESSMANN_APOPTOSIS_BY_SERUM_DEPRIVATION_DN, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN, GOBP_VESICLE_MEDIATED_TRANSPORT, REACTOME_MEMBRANE_TRAFFICKING, GOBP_INTRA_GOLGI_VESICLE_MEDIATED_TRANSPORT, GOCC_TRANS_GOLGI_NETWORK, GOBP_ENDOMEMBRANE_SYSTEM_ORGANIZATION, NIKOLSKY_BREAST_CANCER_17Q21_Q25_AMPLICON, GOBP_GOLGI_ORGANIZATION, GOCC_GOLGI_TRANSPORT_COMPLEX, GOCC_TRANS_GOLGI_NETWORK_MEMBRANE, GOCC_ORGANELLE_SUBCOMPARTMENT, GOBP_GOLGI_VESICLE_TRANSPORT, HATADA_METHYLATED_IN_LUNG_CANCER_UP, REACTOME_POST_TRANSLATIONAL_PROTEIN_MODIFICATION
GO Biological Process (4): retrograde transport, vesicle recycling within Golgi (GO:0000301), intra-Golgi vesicle-mediated transport (GO:0006891), Golgi organization (GO:0007030), protein transport (GO:0015031)
GO Molecular Function (1): protein binding (GO:0005515)
GO Cellular Component (4): Golgi membrane (GO:0000139), Golgi apparatus (GO:0005794), COG complex (GO:0017119), trans-Golgi network membrane (GO:0032588)
Reactome top-level categories
9 top-level categories:
| Category | Pathways |
|---|---|
| Intra-Golgi and retrograde Golgi-to-ER traffic | 2 |
| Membrane Trafficking | 2 |
| ER to Golgi Anterograde Transport | 1 |
| Dengue Virus Infection | 1 |
| Transport to the Golgi and subsequent modification | 1 |
| Vesicle-mediated transport | 1 |
| Post-translational protein modification | 1 |
| Metabolism of proteins | 1 |
| Asparagine N-linked glycosylation | 1 |
GO top-level categories
16 GO namespaces:
| Category | Terms |
|---|---|
| Golgi apparatus | 2 |
| intra-Golgi vesicle-mediated transport | 1 |
| Golgi vesicle transport | 1 |
| organelle organization | 1 |
| endomembrane system organization | 1 |
| transport | 1 |
| intracellular protein localization | 1 |
| establishment of protein localization | 1 |
| binding | 1 |
| bounding membrane of organelle | 1 |
| cytoplasm | 1 |
| endomembrane system | 1 |
| intracellular membrane-bounded organelle | 1 |
| vesicle tethering complex | 1 |
| trans-Golgi network | 1 |
| organelle membrane | 1 |
Experimentally-supported GO annotations
GO terms backed by direct experimental evidence (ECO experimental codes) — 4 of 9 annotations. The rest are phylogenetic / computational / electronic (IEA).
4 experimentally-supported GO terms:
| GO term | NS | Evidence |
|---|---|---|
| Golgi organization | BP | mutant phenotype |
| retrograde transport, vesicle recycling within Golgi | BP | mutant phenotype |
| COG complex | CC | direct assay |
| Golgi apparatus | CC | direct assay |
Protein interactions and networks
STRING
showing 15 of 998 interactions by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| COG1 | COG2 | Q14746 | 991 |
| COG1 | COG3 | Q96JB2 | 984 |
| COG1 | COG5 | Q9UP83 | 984 |
| COG1 | COG7 | P83436 | 983 |
| COG1 | COG8 | Q96MW5 | 964 |
| COG1 | COG4 | Q9H9E3 | 945 |
| COG1 | COG6 | Q9Y2V7 | 933 |
| COG1 | GOSR2 | O14653 | 724 |
| COG1 | VPS51 | Q9UID3 | 688 |
| COG1 | VPS53 | Q5VIR6 | 666 |
| COG1 | VPS54 | Q9P1Q0 | 665 |
| COG1 | COPB1 | P53618 | 653 |
| COG1 | STX16 | O14662 | 633 |
| COG1 | RINT1 | Q6NUQ1 | 630 |
| COG1 | STX5 | Q13190 | 629 |
IntAct
Human interaction partners of COG1 in IntAct, one row per partner (best MIscore; records = supporting IntAct interaction records).
5 partners by confidence:
| Partner | Interaction type | MIscore | Records |
|---|---|---|---|
| COG4 | physical association | 0.560 | 2 |
| CDC42 | physical association | 0.370 | 1 |
| COG8 | association | 0.350 | 1 |
| DSCAM | physical association | 0.000 | 1 |
| MTNR1A | physical association | 0.000 | 1 |
BioGRID (150 interactions; top human partners by supporting records): COG3 (Affinity Capture-MS; 8 records), COG4 (Co-fractionation; 6 records), COG5 (Co-fractionation; 5 records), COG6 (Co-fractionation; 5 records), COG2 (Co-fractionation; 4 records), COG7 (Co-fractionation; 4 records), COG8 (Co-fractionation; 4 records), BSG (Affinity Capture-MS; 3 records), CD274 (Affinity Capture-MS; 3 records), PARP16 (Affinity Capture-MS; 3 records), SCN2B (Affinity Capture-MS; 3 records), COMMD8 (Affinity Capture-MS; 2 records), GOLGA2 (Proximity Label-MS; 2 records), OPRM1 (Affinity Capture-MS; 2 records), AKT1 (Affinity Capture-MS)
SIGNOR signaling
1 signaling interactions:
| A | Effect | B | Mechanism |
|---|---|---|---|
| COG1 | “form complex” | “COG tethering complex” | binding |
Protein complexes (CORUM) (4)
Experimentally-characterized complexes this protein is a subunit of (★ = the complex contains a known drug target).
4 complexes by size:
| Complex | Subunits | Members |
|---|---|---|
| COG complex | 8 | COG2, COG3, COG4, COG5, COG6, COG7, COG8, COG1 |
| COG1-COG8-COG2-COG3-COG4 subcomplex | 5 | COG1, COG2, COG3, COG4, COG8 |
| COG1-COG8-COG5-COG6-COG7 subcomplex | 5 | COG1, COG5, COG6, COG7, COG8 |
| COG1-COG8 subcomplex | 2 | COG1, COG8 |
Disease & clinical
Genetic variants
Variant evidence for COG1: 519 ClinVar records (21 pathogenic / likely pathogenic). Per-variant detail is on Sugi Variant.
ClinVar
519 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 14 |
| Likely pathogenic | 7 |
| Uncertain significance | 253 |
| Likely benign | 157 |
| Benign | 36 |
Top pathogenic / likely-pathogenic (15)
Showing the 15 best-reviewed of 21 pathogenic / likely-pathogenic ClinVar records, ranked by ClinVar review status (expert panel → multiple submitters → single submitter), then by number of submitting labs.
| Variant ID | HGVS | Classification | Review | Submitters |
|---|---|---|---|---|
| 3655 | NM_018714.3(COG1):c.1070+5G>A | Pathogenic | criteria provided, multiple submitters, no conflicts | 4 |
| 2195938 | NM_018714.3(COG1):c.1006C>T (p.Arg336Ter) | Pathogenic | criteria provided, multiple submitters, no conflicts | 2 |
| 1480682 | NM_018714.3(COG1):c.1130del (p.Lys377fs) | Pathogenic | criteria provided, single submitter | 1 |
| 2027635 | NM_018714.3(COG1):c.2686C>T (p.Gln896Ter) | Pathogenic | criteria provided, single submitter | 1 |
| 2028309 | NM_018714.3(COG1):c.254dup (p.Tyr86fs) | Pathogenic | criteria provided, single submitter | 1 |
| 2805911 | NM_018714.3(COG1):c.1091del (p.Asn364fs) | Pathogenic | criteria provided, single submitter | 1 |
| 3684462 | NM_018714.3(COG1):c.1401dup (p.Glu468Ter) | Pathogenic | criteria provided, single submitter | 1 |
| 3728028 | NM_018714.3(COG1):c.2665del (p.Arg889fs) | Pathogenic | criteria provided, single submitter | 1 |
| 3728286 | NM_018714.3(COG1):c.2665_2666insCG (p.Arg889fs) | Pathogenic | criteria provided, single submitter | 1 |
| 4710995 | NM_018714.3(COG1):c.415C>T (p.Gln139Ter) | Pathogenic | criteria provided, single submitter | 1 |
| 4740975 | NM_018714.3(COG1):c.2626_2629dup (p.Gly877fs) | Pathogenic | criteria provided, single submitter | 1 |
| 4764410 | NM_018714.3(COG1):c.1717C>T (p.Gln573Ter) | Pathogenic | criteria provided, single submitter | 1 |
| 4780564 | NM_018714.3(COG1):c.1487del (p.Gly496fs) | Pathogenic | criteria provided, single submitter | 1 |
| 450371 | NM_018714.3(COG1):c.2084_2085insCCTGGTAATAAAATGAC (p.His695_Gly696insLeuValIleLysTer) | Likely pathogenic | criteria provided, single submitter | 1 |
| 452106 | NM_018714.3(COG1):c.1823del (p.Leu608fs) | Likely pathogenic | criteria provided, single submitter | 1 |
Per-variant reference — Sugi Variant
Explore COG1’s pathogenic and likely-pathogenic variants individually — each with its ClinVar classification and conditions, applied ACMG criteria (ClinGen expert panel, where curated), the calibrated in-silico predictors (AlphaMissense, REVEL, SaProt, conservation), gnomAD frequency, and the predictor-disagreement QC signal — on Sugi Variant.
SpliceAI
Top 10 splice-impact sites by Δscore (adjacent positions with the same effect merged into one range; 32 predictions of 1,198):
| Position(s) | Effect | Δscore | Sites |
|---|---|---|---|
| 17:73193385–73193386 | donor_loss | 1.0000 | 5 |
| 17:73200564–73200565 | acceptor_loss | 1.0000 | 5 |
| 17:73200777–73200778 | donor_loss | 1.0000 | 4 |
| 17:73203794–73203795 | donor_loss | 1.0000 | 3 |
| 17:73206263–73206264 | donor_loss | 1.0000 | 2 |
| 17:73206674 | acceptor_gain | 1.0000 | |
| 17:73196479 | acceptor_gain | 0.9900 | |
| 17:73196752–73196753 | donor_loss | 0.9900 | 5 |
| 17:73197046 | donor_gain | 0.9900 | |
| 17:73200022–73200023 | donor_loss | 0.9900 | 5 |
AlphaMissense
1,298 missense substitutions predicted likely pathogenic (of 6,395 scored), across 423 residues. Top 20 hotspot residues, ranked by the number of likely-pathogenic substitutions (of those reachable by a single-nucleotide change), then by mean score:
| Residue | Likely-pathogenic substitutions | Mean am_pathogenicity | Max am_pathogenicity |
|---|---|---|---|
| M69 | 9 | 0.921 | 0.993 |
| D853 | 8 | 0.977 | 0.991 |
| F22 | 8 | 0.969 | 0.991 |
| D850 | 8 | 0.969 | 0.993 |
| F852 | 8 | 0.966 | 0.997 |
| F911 | 8 | 0.952 | 0.996 |
| D482 | 8 | 0.929 | 0.965 |
| D812 | 8 | 0.924 | 0.976 |
| D58 | 8 | 0.913 | 0.956 |
| F273 | 8 | 0.906 | 0.973 |
| F857 | 8 | 0.873 | 0.981 |
| D64 | 8 | 0.851 | 0.936 |
| D855 | 8 | 0.777 | 0.876 |
| W476 | 7 | 0.973 | 0.997 |
| W716 | 7 | 0.970 | 0.996 |
| W354 | 7 | 0.941 | 0.996 |
| W414 | 7 | 0.929 | 0.977 |
| W489 | 7 | 0.922 | 0.981 |
| W685 | 7 | 0.920 | 0.993 |
| M51 | 7 | 0.917 | 0.970 |
HPA cancer prognostics
RNA cancer specificity: Low cancer specificity
Human Protein Atlas survival analysis — favorable = higher expression predicts better survival.
2 prognostic cancer types:
| Cancer | Prognostic | p-value |
|---|---|---|
| Liver Hepatocellular Carcinoma (TCGA) | unfavorable | 5.96e-05 |
| Head and Neck Squamous Cell Carcinoma (TCGA) | unfavorable | 9.71e-05 |
Disease associations
OMIM: gene MIM:606973 | disease phenotypes: MIM:611209
GenCC curated gene-disease
1 curated gene-disease records:
| Disease | Classification | Inheritance | Records |
|---|---|---|---|
| COG1-congenital disorder of glycosylation | Definitive | Autosomal recessive | 3 |
ClinGen Gene-Disease Validity
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
1 validity classifications:
| Disease | Classification | Inheritance |
|---|---|---|
| COG1-congenital disorder of glycosylation | Moderate | AR |
Genomics England panels (PanelApp)
Clinical diagnostic gene panels including this gene (12 panels, 12 green/diagnostic-grade). Confidence: green = diagnostic, amber = moderate.
12 panels:
| Panel | Rating |
|---|---|
| Congenital disorders of glycosylation | green |
| DDG2P | green |
| Fetal anomalies | green |
| Hereditary ataxia and cerebellar anomalies, childhood onset | green |
| Hypotonic infant | green |
| Intellectual disability | green |
| Leukodystrophy, childhood onset | green |
| Likely inborn error of metabolism | green |
| Paediatric disorders | green |
| Skeletal dysplasia | green |
| Undiagnosed metabolic disorders | green |
| Unexplained death in infancy and sudden unexplained death in childhood | green |
Mondo (2): COG1-congenital disorder of glycosylation (MONDO:0012637), nephrotic syndrome (MONDO:0005377)
Orphanet (1): COG1-CDG (Orphanet:263508)
HPO phenotypes
showing 60 of 91 phenotypes (HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000028 | Cryptorchidism |
| HP:0000047 | Hypospadias |
| HP:0000083 | Renal insufficiency |
| HP:0000126 | Hydronephrosis |
| HP:0000160 | Narrow mouth |
| HP:0000162 | Glossoptosis |
| HP:0000175 | Cleft palate |
| HP:0000201 | Pierre-Robin sequence |
| HP:0000218 | High palate |
| HP:0000219 | Thin upper lip vermilion |
| HP:0000252 | Microcephaly |
| HP:0000253 | Progressive microcephaly |
| HP:0000274 | Small face |
| HP:0000316 | Hypertelorism |
| HP:0000319 | Smooth philtrum |
| HP:0000343 | Long philtrum |
| HP:0000347 | Micrognathia |
| HP:0000358 | Posteriorly rotated ears |
| HP:0000369 | Low-set ears |
| HP:0000402 | Stenosis of the external auditory canal |
| HP:0000405 | Conductive hearing impairment |
| HP:0000431 | Wide nasal bridge |
| HP:0000463 | Anteverted nares |
| HP:0000470 | Short neck |
| HP:0000475 | Broad neck |
| HP:0000494 | Downslanted palpebral fissures |
| HP:0000520 | Proptosis |
| HP:0000582 | Upslanted palpebral fissure |
| HP:0000750 | Delayed speech and language development |
| HP:0000902 | Rib fusion |
| HP:0000938 | Osteopenia |
| HP:0000954 | Single transverse palmar crease |
| HP:0001103 | Abnormal macular morphology |
| HP:0001252 | Hypotonia |
| HP:0001256 | Mild intellectual disability |
| HP:0001263 | Global developmental delay |
| HP:0001272 | Cerebellar atrophy |
| HP:0001290 | Generalized hypotonia |
| HP:0001320 | Cerebellar vermis hypoplasia |
| HP:0001433 | Hepatosplenomegaly |
| HP:0001508 | Failure to thrive |
| HP:0001511 | Intrauterine growth retardation |
| HP:0001531 | Failure to thrive in infancy |
| HP:0001712 | Left ventricular hypertrophy |
| HP:0001762 | Talipes equinovarus |
| HP:0001773 | Short foot |
| HP:0001873 | Thrombocytopenia |
| HP:0001902 | Giant platelets |
| HP:0001903 | Anemia |
| HP:0001999 | Abnormal facial shape |
| HP:0002059 | Cerebral atrophy |
| HP:0002092 | Pulmonary arterial hypertension |
| HP:0002280 | Enlarged cisterna magna |
| HP:0002342 | Moderate intellectual disability |
| HP:0002673 | Coxa valga |
| HP:0002719 | Recurrent infections |
| HP:0002751 | Kyphoscoliosis |
| HP:0002943 | Thoracic scoliosis |
| HP:0003026 | Short long bone |
MeSH disease descriptors
2 disease descriptors:
| Descriptor | Name | Tree numbers |
|---|---|---|
| D009404 | Nephrotic Syndrome | C12.050.351.968.419.630.643; C12.200.777.419.630.643; C12.950.419.630.643 |
| C535756 | Congenital disorder of glycosylation, type 2G *(supp.)* |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL4105805 (SINGLE PROTEIN)
PharmGKB: 1 entry (CPIC guideline: no)
Binding affinities (BindingDB)
1 measured of 1 human assays (2 total across all organisms); most potent 1 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value |
|---|---|---|
| CHEMBL5653589 | KD | 1440 nM |
ChEMBL bioactivities
2 potent at pChembl≥5 of 4 total, top 2 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 8.41 | Kd | 3.9 | nM | CHEMBL3752910 |
| 8.41 | ED50 | 3.9 | nM | CHEMBL3752910 |
PubChem BioAssay actives
1 with measured affinity, of 6 total; 1 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 4-methyl-3-[(1-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2148104: Binding affinity to human COG1 incubated for 45 mins by Kinobead based pull down assay | kd | 0.0039 | uM |
CTD chemical–gene interactions
28 total (human), top 28 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | affects expression, decreases expression, increases methylation | 3 |
| aristolochic acid I | increases expression | 1 |
| FR900359 | decreases phosphorylation | 1 |
| 2,4,6-tribromophenol | decreases expression | 1 |
| bisphenol A | decreases expression | 1 |
| decabromobiphenyl ether | decreases expression | 1 |
| sodium arsenite | increases expression | 1 |
| tetrabromobisphenol A | increases expression | 1 |
| coumarin | decreases phosphorylation | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| abrine | increases expression | 1 |
| pentabrominated diphenyl ether 100 | decreases expression | 1 |
| hexabrominated diphenyl ether 153 | decreases expression | 1 |
| bisphenol S | increases methylation | 1 |
| Temozolomide | increases expression | 1 |
| Sunitinib | increases expression | 1 |
| Arsenic | affects methylation | 1 |
| Benzo(a)pyrene | increases methylation | 1 |
| Doxorubicin | decreases expression | 1 |
| Ethyl Methanesulfonate | increases expression | 1 |
| Ivermectin | decreases expression | 1 |
| Smoke | decreases expression | 1 |
| Urethane | decreases expression | 1 |
| Cyclosporine | increases expression | 1 |
| Aflatoxin B1 | increases expression | 1 |
| Asbestos, Crocidolite | decreases expression | 1 |
| Thapsigargin | increases expression | 1 |
| Copper Sulfate | decreases expression | 1 |
ChEMBL screening assays
2 unique, capped per target: 2 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL4012601 | Binding | Binding affinity to COG1 in human INA-6 cells after 3 hrs by nanoLC-MS/MS method | Ugi Reaction-Derived α-Acyl Aminocarboxamides Bind to Phosphatidylinositol 3-Kinase-Related Kinases, Inhibit HSF1-Dependent Heat Shock Response, and Induce Apoptosis in Multiple Myeloma Cells. — *J Med Chem* |
Cellosaurus cell lines
1 cell lines: 1 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_A637 | KMS-18 | Cancer cell line | Male |
Clinical trials (associated diseases)
Via MONDO — disease-level, not drug-specific.
showing 60 of 300 trials:
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT00029224 | Phase 4 | COMPLETED | Treatment With Zoledronic Acid in Patients With Breast Cancer, Multiple Myeloma, and Prostate Cancer With Cancer Related Bone Lesions |
| NCT00035997 | Phase 4 | COMPLETED | Open-label Trial on the Effect of I.V. Zoledronic Acid 4 mg on Bone Density in Hormone Sensitive Prostate Cancer Patients With Bone Metastasis |
| NCT00063609 | Phase 4 | COMPLETED | The Effect of Zoledronic Acid on Bone Loss in Prostate Cancer Patients Undergoing Androgen Deprivation Therapy |
| NCT00103623 | Phase 4 | SUSPENDED | The Plenaxis® Experience Study |
| NCT00106392 | Phase 4 | COMPLETED | A Safety and Efficacy Study of Prograf in the Prevention of Erectile Dysfunction After Radical Prostatectomy |
| NCT00185029 | Phase 4 | UNKNOWN | MR-Lymphography and Lymph Node Staging in Prostate Cancer |
| NCT00199485 | Phase 4 | COMPLETED | Angelica Sinensis for the Treatment of Hot Flashes in Men Undergoing LHRH Therapy for Prostate Cancer |
| NCT00219219 | Phase 4 | COMPLETED | Zoledronic Acid in the Prevention of Skeletal-related Events in Hormone Refractory and Hormone-sensitive Prostate Cancer Patients With Bone Metastases |
| NCT00219271 | Phase 4 | COMPLETED | Effect Of Zoledronic Acid On Circulating And Bone Marrow-Residing Prostate Cancer Cells In Patients With Clinically Localized Prostate Cancer |
| NCT00237146 | Phase 4 | COMPLETED | Study to Evaluate Zoledronic Acid on Quality of Life and Skeletal-related Events as Adjuvant Treatment in Patients With Hormone-naïve Prostate Cancer and Bone Metastasis Who Have Undergone Orchiectomy |
| NCT00242554 | Phase 4 | COMPLETED | Open-label Phase IV Clinical Trial to Evaluate the Safety and Tolerability of Zoledronic Acid in Patients With Prostate Cancer and Bone Metastases |
| NCT00280098 | Phase 4 | COMPLETED | Docetaxel in the Treatment of Hormone Refractory Prostate Cancer |
| NCT00293696 | Phase 4 | COMPLETED | Casodex/Zoladex Biomarkers in Localised Prostate Cancer |
| NCT00334139 | Phase 4 | COMPLETED | Effect of Zoledronic Acid on Bone Metabolism in Patients With Bone Metastasis and Prostate or Breast Cancer |
| NCT00375765 | Phase 4 | COMPLETED | Effects On Dihydrotestosterone Regulated Gene Expression In Benign Prostatic Hyperplasia Or Prostate Cancer |
| NCT00391690 | Phase 4 | COMPLETED | Evaluation of Bone Markers as Diagnostic Tools for Early Detection of Bone Metastases in Patients With High Risk Prostate Cancer |
| NCT00422708 | Phase 4 | COMPLETED | Local Anesthesia for Prostate Biopsy |
| NCT00526331 | Phase 4 | COMPLETED | Evaluation of Arterial Pressure Based Cardiac Output for Goal-Directed Perioperative Therapy |
| NCT00590213 | Phase 4 | COMPLETED | Compare the Value of Prophylactic Versus Therapeutic Breast Radiotherapy in CASODEX |
| NCT00629330 | Phase 4 | TERMINATED | Dissemination of Prostate Cancer Screening to PCP’s in African American Communities |
| NCT00771966 | Phase 4 | COMPLETED | Radical Prostatectomy and Perioperative Fluid Therapy |
| NCT00805701 | Phase 4 | COMPLETED | Study Assessing The Efficacy And Safety Of Avodart (Dutasteride) At Improving Urinary Symptoms In Men With Prostate Cancer Who Are Undergoing Seed Implantation |
| NCT00859027 | Phase 4 | COMPLETED | Effect Of Risedronate On Bone Mass In Older Men Receiving Neoadjuvant Therapy For Prostate Cancer |
| NCT00906269 | Phase 4 | UNKNOWN | Can Hyperbaric Oxygen Improve Erectile Function Following Surgery for Prostate Cancer |
| NCT00953277 | Phase 4 | COMPLETED | Study of Nerve Reconstruction Using AVANCE in Subjects Who Undergo Robotic Assisted Prostatectomy for Treatment of Prostate Cancer |
| NCT00982800 | Phase 4 | COMPLETED | Does Postoperative Gabapentin Reduce Pain, Opioid Consumption and Anxiety and Have a Positive Effect on Health Related Quality of Life After Radical Prostatectomy? |
| NCT01083199 | Phase 4 | COMPLETED | Global Performance Evaluation of the AMS CONTINUUM™ Device |
| NCT01136226 | Phase 4 | COMPLETED | Evaluate Recovery of Testosterone for Patients Using Eligard |
| NCT01161563 | Phase 4 | COMPLETED | Randomized Crossover Trial to Assess the Tolerability of Gonadotropin Releasing Hormone (GnRH) Analogue Administration |
| NCT01230905 | Phase 4 | COMPLETED | Study to Monitor the Effects of Androgen Suppression Treatment on the Heart |
| NCT01296672 | Phase 4 | COMPLETED | 3 Month Finasteride Challenge Test Can Significantly Improve the Performance of Screening for Prostate Cancer |
| NCT01365143 | Phase 4 | TERMINATED | Prospective Randomized Trial Comparing Robotic Versus Open Radical Prostatectomy |
| NCT01379742 | Phase 4 | UNKNOWN | Comparison of Between ThinSeed™ and OncoSeed™ for Permanent Prostate Brachytherapy |
| NCT01486563 | Phase 4 | COMPLETED | Hydroxyethyl Starch and Renal Function After Radical Prostatectomy |
| NCT01511874 | Phase 4 | COMPLETED | Efficacy and Safety Study of ELIGARD 22.5mg With Prostate Cancer |
| NCT01512472 | Phase 4 | TERMINATED | Firmagon (Degarelix) Intermittent Therapy |
| NCT01547416 | Phase 4 | COMPLETED | The Effect of Combined General/Epidural Anesthesia Versus General Anesthesia on Diaphragmatic Function |
| NCT01571544 | Phase 4 | COMPLETED | The Use of Thermal Suits as Preventing Hypothermia During Surgery |
| NCT01581749 | Phase 4 | UNKNOWN | Evaluation of Truebeam for Low-Intermediate Risk Prostate Cancer |
| NCT01649635 | Phase 4 | COMPLETED | Study of Cabazitaxel Combined With Prednisone and Prophylaxis of Neutropenia Complications in the Treatment of Patients With Metastatic Castration-resistant Prostate Cancer |
| NCT01673984 | Phase 4 | TERMINATED | GP Extended Action Triptorelin |
| NCT01753297 | Phase 4 | COMPLETED | A Study of Immediate 9 Months Adjuvant Hormone Therapy With Triptorelin 11.25 mg Versus Active Surveillance After Radical Prostatectomy in High Risk Prostate Cancer Patients. |
| NCT01794793 | Phase 4 | COMPLETED | Study to Allow Access to Pasireotide for Patients Benefiting From Pasireotide Treatment in Novartis-sponsored Studies |
| NCT01950871 | Phase 4 | TERMINATED | Prostate Guided Biopsy Study Evaluating the Diagnostic Performance of Prostate HistoScanning |
| NCT01995513 | Phase 4 | COMPLETED | Safety Study of Continued Enzalutamide Treatment In Prostate Cancer Patients |
| NCT02102646 | Phase 4 | COMPLETED | MRI Substudy; Metabolic Changes Due to Iatrogenic Hypogonadism |
| NCT02116582 | Phase 4 | COMPLETED | A Study to Evaluate Enzalutamide After Abiraterone in Metastatic Castration-Resistant Prostate Cancer |
| NCT02149628 | Phase 4 | COMPLETED | The Effect of Propofol Based Total Intravenous Anesthesia on Oxidative Stress and Nitric Oxide |
| NCT02405858 | Phase 4 | COMPLETED | A Study of Abiraterone Acetate in Metastatic Castration-Resistant Prostate Cancer Participants Who Responded Poorly to the First-line Combined Androgen Blockade Therapy |
| NCT02441517 | Phase 4 | TERMINATED | A Study of Enzalutamide Re-treatment in Metastatic Castration-resistant Prostate Cancer After Docetaxel and/or Cabazitaxel Treatment |
| NCT02441894 | Phase 4 | COMPLETED | Combination of Cabazitaxel With Prednisolone With Primary Prophylaxis With PEG-G-CSF in Treatment of Patients With Prostate Cancer |
| NCT02475057 | Phase 4 | COMPLETED | Endothelial Function in Prostate Cancer Patients on Degarelix vs. Luteinizing Hormone-Releasing Hormone Agonists |
| NCT02511665 | Phase 4 | UNKNOWN | Metformin And Longevity |
| NCT02651948 | Phase 4 | COMPLETED | Transperineal, MRI-guided, Prostate Biopsy |
| NCT02721433 | Phase 4 | COMPLETED | 4-weekly Versus 12-weekly Administration of Bone-targeted Agents in Patients With Bone Metastases |
| NCT02726009 | Phase 4 | COMPLETED | A Trial to Evaluate Safety of Firmagon® (Degarelix) in Indian Patients Diagnosed With Advanced Hormone-dependent Prostate Cancer |
| NCT02749825 | Phase 4 | TERMINATED | Comparison of Trelstar Versus Lupron or Zoladex in Advanced Prostate Cancer |
| NCT02757365 | Phase 4 | UNKNOWN | Efficiency Study of Aspirin to Prevent the Occurrence of Prostate Cancer |
| NCT02773251 | Phase 4 | COMPLETED | The Effect of Guardix-solution for the Prevention of Postoperative Intestinal Adhesion and Intestinal Obstruction After Laparoscopic Pelvic Cavity Surgery |
| NCT02812186 | Phase 4 | COMPLETED | Deep Versus Moderate Neuromuscular Blockade During Laparoscopic Surgery |
Predicted chemistry — Sugi Predict
The predicted patent-compound landscape for COG1 across ~30M SureChEMBL compounds — explore on Sugi Predict.
Related Atlas pages
- Associated diseases: COG1-congenital disorder of glycosylation
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): COG1-congenital disorder of glycosylation, nephrotic syndrome