COL23A1-AS1

Summary

COL23A1-AS1 (COL23A1 antisense RNA 1, HGNC:41005) is a long non-coding RNA gene on chromosome 5q35.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41005
Approved symbol	COL23A1-AS1
Name	COL23A1 antisense RNA 1
Location	5q35.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000253698
Ensembl biotype	lncRNA
Entrez	141732002

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000521803

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000521803 — 2 exons

Exon	Start	End
ENSE00002111260	178350867	178351199
ENSE00002134524	178351918	178352250

Expression profiles

Bgee: expression breadth broad, 55 present calls, max score 69.41.

Top tissues by expression

55 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow cell	CL:0002092	69.41	silver quality
sural nerve	UBERON:0015488	66.76	silver quality
urinary bladder	UBERON:0001255	57.80	gold quality
tibial nerve	UBERON:0001323	56.28	silver quality
cortex of kidney	UBERON:0001225	56.02	gold quality
monocyte	CL:0000576	55.13	gold quality
bone marrow	UBERON:0002371	54.78	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	53.46	gold quality
lymph node	UBERON:0000029	51.46	gold quality
gall bladder	UBERON:0002110	51.05	gold quality
nucleus accumbens	UBERON:0001882	50.43	gold quality
kidney	UBERON:0002113	50.40	gold quality
blood	UBERON:0000178	50.39	silver quality
vermiform appendix	UBERON:0001154	49.89	gold quality
ovary	UBERON:0000992	48.94	gold quality
small intestine	UBERON:0002108	48.80	gold quality
tibial artery	UBERON:0007610	45.50	silver quality
adult mammalian kidney	UBERON:0000082	45.36	gold quality
adrenal tissue	UBERON:0018303	45.07	silver quality
dorsolateral prefrontal cortex	UBERON:0009834	45.02	gold quality
left adrenal gland cortex	UBERON:0035825	44.17	gold quality
prefrontal cortex	UBERON:0000451	43.81	silver quality
left adrenal gland	UBERON:0001234	43.62	gold quality
Ammon’s horn	UBERON:0001954	43.45	silver quality
right lobe of thyroid gland	UBERON:0001119	43.43	gold quality
gastrocnemius	UBERON:0001388	43.27	silver quality
thyroid gland	UBERON:0002046	43.13	silver quality
thoracic mammary gland	UBERON:0005200	43.09	gold quality
rectum	UBERON:0001052	42.90	gold quality
heart left ventricle	UBERON:0002084	42.21	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.49

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.