COL5A1-AS1

Summary

COL5A1-AS1 (COL5A1 antisense RNA 1, HGNC:31368) is a long non-coding RNA gene on chromosome 9q34.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:31368
Approved symbol	COL5A1-AS1
Name	COL5A1 antisense RNA 1
Location	9q34.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	bA54A22.4
Ensembl gene	ENSG00000204011
Ensembl biotype	lncRNA
Entrez	414316
RNAcentral	URS0000A7684D — lncRNA, 351 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000371813

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000371813 — 2 exons

Exon	Start	End
ENSE00001456143	134649385	134649584
ENSE00001456144	134652708	134653073

Expression profiles

Bgee: expression breadth ubiquitous, 114 present calls, max score 69.15.

Top tissues by expression

114 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	69.15	gold quality
colonic epithelium	UBERON:0000397	62.75	silver quality
ectocervix	UBERON:0012249	62.22	gold quality
uterine cervix	UBERON:0000002	62.20	gold quality
stromal cell of endometrium	CL:0002255	61.94	gold quality
endocervix	UBERON:0000458	60.51	gold quality
ascending aorta	UBERON:0001496	59.99	gold quality
thoracic aorta	UBERON:0001515	59.55	gold quality
left uterine tube	UBERON:0001303	58.85	gold quality
gall bladder	UBERON:0002110	58.36	gold quality
adrenal tissue	UBERON:0018303	57.92	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	57.71	gold quality
vermiform appendix	UBERON:0001154	57.69	gold quality
apex of heart	UBERON:0002098	56.84	gold quality
body of uterus	UBERON:0009853	56.80	gold quality
tibial nerve	UBERON:0001323	56.23	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	56.09	gold quality
urinary bladder	UBERON:0001255	55.21	gold quality
fallopian tube	UBERON:0003889	55.12	gold quality
muscle layer of sigmoid colon	UBERON:0035805	54.99	gold quality
islet of Langerhans	UBERON:0000006	54.74	gold quality
myometrium	UBERON:0001296	54.62	gold quality
mucosa of stomach	UBERON:0001199	54.33	gold quality
popliteal artery	UBERON:0002250	53.98	gold quality
tibial artery	UBERON:0007610	53.94	gold quality
endometrium	UBERON:0001295	53.86	gold quality
vagina	UBERON:0000996	53.81	gold quality
smooth muscle tissue	UBERON:0001135	53.79	gold quality
lower esophagus muscularis layer	UBERON:0035833	53.51	gold quality
lower esophagus	UBERON:0013473	53.44	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.92

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.