COQ8A
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Also known as COQ8SCAR9
Summary
COQ8A (coenzyme Q8A, HGNC:16812) is a protein-coding gene on chromosome 1q42.13, encoding Atypical kinase COQ8A, mitochondrial (Q8NI60). Atypical kinase involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.
This gene encodes a mitochondrial protein similar to yeast ABC1, which functions in an electron-transferring membrane protein complex in the respiratory chain. It is not related to the family of ABC transporter proteins. Expression of this gene is induced by the tumor suppressor p53 and in response to DNA damage, and inhibiting its expression partially suppresses p53-induced apoptosis. Alternatively spliced transcript variants have been found; however, their full-length nature has not been determined.
Source: NCBI Gene 56997 — RefSeq curated summary.
At a glance
- Gene–disease (curated): coenzyme Q10 deficiency (Definitive, GenCC) — +1 more curated relationship
- GWAS associations: 21
- Clinical variants (ClinVar): 825 total — 53 pathogenic, 47 likely-pathogenic
- Phenotypes (HPO): 38
- Druggable target: yes — 14 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_020247
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:16812 |
| Approved symbol | COQ8A |
| Name | coenzyme Q8A |
| Location | 1q42.13 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | COQ8, SCAR9 |
| Ensembl gene | ENSG00000163050 |
| Ensembl biotype | protein_coding |
| OMIM | 606980 |
| Entrez | 56997 |
Gene structure
Transcript identifiers
Ensembl transcripts: 77 — 72 protein_coding, 5 protein_coding_CDS_not_defined
ENST00000366777, ENST00000366778, ENST00000476488, ENST00000478406, ENST00000479852, ENST00000485462, ENST00000489044, ENST00000873690, ENST00000873691, ENST00000873692, ENST00000873693, ENST00000873694, ENST00000873695, ENST00000873696, ENST00000873697, ENST00000873698, ENST00000873699, ENST00000873700, ENST00000873701, ENST00000873702, ENST00000873703, ENST00000873704, ENST00000873705, ENST00000873706, ENST00000873707, ENST00000873708, ENST00000873709, ENST00000873710, ENST00000873711, ENST00000873712, ENST00000873713, ENST00000873714, ENST00000873715, ENST00000873716, ENST00000873717, ENST00000873718, ENST00000873719, ENST00000873720, ENST00000873721, ENST00000912836, ENST00000912837, ENST00000912838, ENST00000912839, ENST00000950267, ENST00000950268, ENST00000950269, ENST00000950270, ENST00000950271, ENST00000950272, ENST00000950273, ENST00000950274, ENST00000950275, ENST00000950276, ENST00000950277, ENST00000950278, ENST00000950279, ENST00000950280, ENST00000950281, ENST00000950282, ENST00000950283, ENST00000950284, ENST00000950285, ENST00000950286, ENST00000950287, ENST00000950288, ENST00000950289, ENST00000950290, ENST00000950291, ENST00000950292, ENST00000950293, ENST00000950294, ENST00000950295, ENST00000950296, ENST00000950297, ENST00000950298, ENST00000950299, ENST00000950300
RefSeq mRNA: 1 — MANE Select: NM_020247
NM_020247
CCDS: CCDS1557
Canonical transcript exons
ENST00000366777 — 15 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001442588 | 226940294 | 226940399 |
| ENSE00003478570 | 226986453 | 226987544 |
| ENSE00003484517 | 226984876 | 226984941 |
| ENSE00003501755 | 226982678 | 226982763 |
| ENSE00003507175 | 226983552 | 226983633 |
| ENSE00003523471 | 226984548 | 226984655 |
| ENSE00003534044 | 226984094 | 226984235 |
| ENSE00003553064 | 226977449 | 226977523 |
| ENSE00003561805 | 226965000 | 226965410 |
| ENSE00003581102 | 226982027 | 226982149 |
| ENSE00003587494 | 226983761 | 226983854 |
| ENSE00003597680 | 226965671 | 226965737 |
| ENSE00003615429 | 226985254 | 226985340 |
| ENSE00003663561 | 226982894 | 226983034 |
| ENSE00003909988 | 226961377 | 226961562 |
Expression profiles
Bgee: expression breadth ubiquitous, 134 present calls, max score 99.61.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 14.8672 / max 472.8238, expressed in 1721 samples.
FANTOM5 promoters (5 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 8890 | 12.0974 | 1662 |
| 8891 | 1.6138 | 572 |
| 8889 | 0.6706 | 426 |
| 8893 | 0.3371 | 105 |
| 8894 | 0.1483 | 42 |
Top tissues by expression
134 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| gastrocnemius | UBERON:0001388 | 99.61 | gold quality |
| skeletal muscle tissue | UBERON:0001134 | 99.43 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 99.33 | gold quality |
| muscle of leg | UBERON:0001383 | 99.15 | gold quality |
| apex of heart | UBERON:0002098 | 98.80 | gold quality |
| body of pancreas | UBERON:0001150 | 98.40 | gold quality |
| heart left ventricle | UBERON:0002084 | 98.40 | gold quality |
| right adrenal gland | UBERON:0001233 | 98.39 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 98.31 | gold quality |
| left adrenal gland | UBERON:0001234 | 98.10 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 97.80 | gold quality |
| right atrium auricular region | UBERON:0006631 | 97.35 | gold quality |
| fundus of stomach | UBERON:0001160 | 97.07 | gold quality |
| body of stomach | UBERON:0001161 | 96.99 | gold quality |
| right lobe of liver | UBERON:0001114 | 96.58 | gold quality |
| heart | UBERON:0000948 | 96.54 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 96.54 | gold quality |
| cerebellum | UBERON:0002037 | 96.48 | gold quality |
| cerebellar cortex | UBERON:0002129 | 96.47 | gold quality |
| muscle tissue | UBERON:0002385 | 96.41 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 96.41 | gold quality |
| adrenal gland | UBERON:0002369 | 96.40 | gold quality |
| subcutaneous adipose tissue | UBERON:0002190 | 96.17 | gold quality |
| right uterine tube | UBERON:0001302 | 95.83 | gold quality |
| left ovary | UBERON:0002119 | 95.71 | gold quality |
| right ovary | UBERON:0002118 | 95.68 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 95.48 | gold quality |
| lower esophagus | UBERON:0013473 | 95.43 | gold quality |
| ovary | UBERON:0000992 | 95.30 | gold quality |
| stomach | UBERON:0000945 | 95.23 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-6142 | no | 154.32 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): SP1, ZBTB4
miRNA regulators (miRDB)
27 targeting COQ8A, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-188-3P | 100.00 | 68.76 | 1240 |
| HSA-MIR-4510 | 100.00 | 66.60 | 2050 |
| HSA-MIR-6127 | 100.00 | 66.76 | 2188 |
| HSA-MIR-6129 | 100.00 | 66.46 | 2080 |
| HSA-MIR-6130 | 100.00 | 66.69 | 2012 |
| HSA-MIR-6133 | 100.00 | 66.48 | 2064 |
| HSA-MIR-4262 | 100.00 | 73.26 | 3931 |
| HSA-MIR-493-5P | 99.96 | 72.47 | 2382 |
| HSA-LET-7C-3P | 99.95 | 73.42 | 2862 |
| HSA-LET-7A-2-3P | 99.87 | 70.53 | 1921 |
| HSA-MIR-3151-5P | 99.86 | 63.83 | 1069 |
| HSA-LET-7G-3P | 99.85 | 70.43 | 1929 |
| HSA-MIR-4306 | 99.72 | 70.50 | 3630 |
| HSA-MIR-3202 | 99.66 | 67.70 | 2737 |
| HSA-MIR-4804-3P | 99.65 | 67.78 | 866 |
| HSA-MIR-510-3P | 99.54 | 70.06 | 2965 |
| HSA-MIR-543 | 99.52 | 69.03 | 2595 |
| HSA-MIR-185-5P | 99.35 | 68.60 | 2497 |
| HSA-MIR-452-3P | 99.01 | 66.25 | 1241 |
| HSA-MIR-6784-3P | 98.39 | 64.88 | 662 |
| HSA-MIR-6842-3P | 98.07 | 66.33 | 1325 |
| HSA-MIR-6862-3P | 97.92 | 64.86 | 531 |
| HSA-MIR-3652 | 97.71 | 65.43 | 1890 |
| HSA-MIR-4430 | 97.47 | 65.61 | 1813 |
| HSA-MIR-214-5P | 97.34 | 66.50 | 617 |
| HSA-MIR-4653-3P | 96.26 | 67.03 | 725 |
| HSA-MIR-4442 | 92.35 | 67.08 | 98 |
Literature-anchored findings (GeneRIF, showing 12)
- play an important role in mediating p53-inducible apoptosis through the mitochondrial pathway. (PMID:11888884)
- CABC1 gene mutations in four ubiquinone-deficient patients in three distinct families were reported. (PMID:18319072)
- Five additional mutations in ADCK3 were found in three patients with sporadic ataxia, including one known to have CoQ10 deficiency in muscle. (PMID:18319074)
- These observations highlight the importance of screening for a potentially treatable cause, CABC1/ADCK3 mutations (PMID:22036850)
- a structural foundation for investigating the role of transmembrane association in regulating the biological activity of ADCK3 (PMID:25216398)
- Mitochondrial ADCK3 employs an atypical protein kinase-like fold to enable coenzyme Q biosynthesis. (PMID:25498144)
- work reveals Mg(2+)-dependent ATPase activity of ADCK3, providing strong support for the theoretical prediction of this protein being a functional atypical kinase. (PMID:25540914)
- ADCK3/COQ8 localises to mitochondrial cristae and is targeted to this organelle via the presence of an N-terminal localisation signal (PMID:26866375)
- Loss of COQ8a results in cerebellar ataxia and coenzyme Q deficiency. (PMID:27499294)
- expand the clinical, molecular and biochemical spectrum of ADCK3 related CoQ10 deficiencies (PMID:30968303)
- Clinico-Genetic, Imaging and Molecular Delineation of COQ8A-Ataxia: A Multicenter Study of 59 Patients. (PMID:32337771)
- Photoparoxysmal response in ADCK3 autosomal recessive ataxia: a case report and literature review. (PMID:33622667)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | coq8aa | ENSDARG00000020123 |
| danio_rerio | coq8ab | ENSDARG00000032426 |
| mus_musculus | Coq8a | ENSMUSG00000026489 |
| rattus_norvegicus | Coq8a | ENSRNOG00000043201 |
Paralogs (4): ADCK1 (ENSG00000063761), COQ8B (ENSG00000123815), ADCK2 (ENSG00000133597), ADCK5 (ENSG00000173137)
Protein
Protein identifiers
Atypical kinase COQ8A, mitochondrial — Q8NI60 (reviewed: Q8NI60)
Alternative names: Chaperone activity of bc1 complex-like, Coenzyme Q protein 8A, aarF domain-containing protein kinase 3
All UniProt accessions (1): Q8NI60
UniProt curated annotations — full annotation on UniProt →
Function. Atypical kinase involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration. Its substrate specificity is still unclear: may act as a protein kinase that mediates phosphorylation of COQ3. According to other reports, acts as a small molecule kinase, possibly a lipid kinase that phosphorylates a prenyl lipid in the ubiquinone biosynthesis pathway, as suggested by its ability to bind coenzyme Q lipid intermediates. However, the small molecule kinase activity was not confirmed by another publication. Shows an unusual selectivity for binding ADP over ATP.
Subunit / interactions. Homodimer; homodimerizes via its transmembrane region. Interacts with the multi-subunit COQ enzyme complex, composed of at least COQ3, COQ4, COQ5, COQ6, COQ7 and COQ9.
Subcellular location. Mitochondrion membrane.
Tissue specificity. Widely expressed, with highest levels in adrenal gland, heart, pancreas, nasal mucosa, stomach, uterus and skeletal muscle.
Disease relevance. Coenzyme Q10 deficiency, primary, 4 (COQ10D4) [MIM:612016] An autosomal recessive disorder characterized by childhood-onset of cerebellar ataxia and exercise intolerance. Patient manifest gait ataxia and cerebellar atrophy with slow progression. Additional features include brisk tendon reflexes and Hoffmann sign, variable psychomotor retardation and variable seizures. The disease is caused by variants affecting the gene represented in this entry.
Activity regulation. Autoinhibited by the N-terminal domain, containing the KxGQ motif, that completely occludes the typical substrate binding pocket. Nucleotide-binding relieves inhibition. Specifically inhibited by 4-anilinoquinoline compound TPP-UNC-CA157.
Domain organisation. Adopts an atypical protein kinase-like fold: while it adopts a core fold similar to that of well-characterized protein kinase-like domains, a number of features are positioned to inhibit the kinase activity: (1) an atypical AAAS motif in an alanine-rich (A-rich) loop that replaces the canonical glycine-rich (G-rich) nucleotide-binding loop and limits ATP binding by establishing an unusual selectivity for ADP and (2) an N-terminal domain, containing the KxGQ motif, that completely occludes the typical substrate binding pocket. Nucleotide-binding opens the substrate binding pocket and flips the active site from inside the hydrophobic core into a catalytically competent, solvent-exposed posture.
Induction. By p53/TP53.
Pathway. Cofactor biosynthesis; ubiquinone biosynthesis.
Similarity. Belongs to the protein kinase superfamily. ADCK protein kinase family.
Isoforms (4)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q8NI60-1 | 1 | yes |
| Q8NI60-2 | 2 | |
| Q8NI60-3 | 3 | |
| Q8NI60-4 | 4 |
RefSeq proteins (1): NP_064632* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR004147 | ABC1_dom | Domain |
| IPR011009 | Kinase-like_dom_sf | Homologous_superfamily |
| IPR034646 | ADCK3_dom | Domain |
| IPR051409 | Atypical_kinase_ADCK | Family |
Pfam: PF03109
UniProt features (105 total): mutagenesis site 30, helix 23, sequence variant 16, strand 14, binding site 5, splice variant 3, turn 3, region of interest 2, short sequence motif 2, transit peptide 1, chain 1, transmembrane region 1, domain 1, sequence conflict 1, compositionally biased region 1, active site 1
Structure
Experimental structures (PDB)
4 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 4PED | X-RAY DIFFRACTION | 1.64 |
| 7UDQ | X-RAY DIFFRACTION | 1.9 |
| 7UDP | X-RAY DIFFRACTION | 2.01 |
| 5I35 | X-RAY DIFFRACTION | 2.3 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q8NI60-F1 | 70.65 | 0.33 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 488 (proton acceptor)
Ligand- & substrate-binding residues (5): 340; 358; 445–448; 493; 507
Mutagenesis-validated functional residues (30):
| Position | Phenotype |
|---|---|
| 214 | strongly impairs homodimerization. |
| 214 | slightly impaired homodimerization. |
| 215 | does not impair homodimerization. |
| 216 | does not impair homodimerization. |
| 217 | slightly impaired homodimerization. |
| 218 | slightly impaired homodimerization. |
| 219 | slightly impaired homodimerization. |
| 219 | strongly impairs homodimerization. |
| 220 | impaired homodimerization. |
| 221 | slightly impaired homodimerization. |
| 222 | slightly impaired homodimerization. |
| 223 | strongly impairs homodimerization. |
| 224 | impaired homodimerization. |
| 225 | slightly impaired homodimerization. |
| 226 | slightly impaired homodimerization. |
| 227 | strongly impairs homodimerization. |
| 228 | does not impair homodimerization. |
| 229 | slightly impaired homodimerization. |
| 230 | slightly impaired homodimerization. |
| 276 | does not affect selectivity for binding adp or atp. impaired multi-subunit coq enzyme complex. |
| 279 | does not affect selectivity for binding adp or atp. |
| 339 | enables autophosphorylation but inhibits coenzyme q biosynthesis in vivo. |
| 358 | abolishes binding adp or atp. |
| 405 | slightly affects selectivity for binding adp or atp. |
| 411 | impaired binding adp or atp. |
Function
Pathways and Gene Ontology
Reactome pathways
1 pathways
| ID | Pathway |
|---|---|
| R-HSA-2142789 | Ubiquinol biosynthesis |
MSigDB gene sets: 293 (showing top):
MODULE_255, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN, MODULE_317, DARWICHE_SKIN_TUMOR_PROMOTER_DN, DARWICHE_PAPILLOMA_RISK_LOW_DN, DARWICHE_PAPILLOMA_RISK_HIGH_DN, DARWICHE_SQUAMOUS_CELL_CARCINOMA_DN, GOBP_KETONE_METABOLIC_PROCESS, GOBP_SMALL_MOLECULE_BIOSYNTHETIC_PROCESS, MCBRYAN_PUBERTAL_BREAST_4_5WK_DN, SHETH_LIVER_CANCER_VS_TXNIP_LOSS_PAM4, BLALOCK_ALZHEIMERS_DISEASE_UP, GOCC_MITOCHONDRIAL_ENVELOPE, GOBP_KETONE_BIOSYNTHETIC_PROCESS, CAIRO_HEPATOBLASTOMA_UP
GO Biological Process (2): ubiquinone biosynthetic process (GO:0006744), phosphorylation (GO:0016310)
GO Molecular Function (8): protein kinase activity (GO:0004672), ATP binding (GO:0005524), enzyme activator activity (GO:0008047), kinase activity (GO:0016301), ADP binding (GO:0043531), nucleotide binding (GO:0000166), protein binding (GO:0005515), transferase activity (GO:0016740)
GO Cellular Component (4): mitochondrion (GO:0005739), extrinsic component of mitochondrial inner membrane (GO:0031314), membrane (GO:0016020), mitochondrial membrane (GO:0031966)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| Metabolism of cofactors | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| adenyl ribonucleotide binding | 2 |
| catalytic activity | 2 |
| ubiquinone metabolic process | 1 |
| quinone biosynthetic process | 1 |
| phosphate-containing compound metabolic process | 1 |
| kinase activity | 1 |
| phosphotransferase activity, alcohol group as acceptor | 1 |
| catalytic activity, acting on a protein | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| enzyme regulator activity | 1 |
| molecular function activator activity | 1 |
| transferase activity, transferring phosphorus-containing groups | 1 |
| anion binding | 1 |
| nucleoside phosphate binding | 1 |
| heterocyclic compound binding | 1 |
| binding | 1 |
| cytoplasm | 1 |
| intracellular membrane-bounded organelle | 1 |
| mitochondrial inner membrane | 1 |
| extrinsic component of organelle membrane | 1 |
| cellular anatomical structure | 1 |
| mitochondrion | 1 |
| mitochondrial envelope | 1 |
| organelle membrane | 1 |
Protein interactions and networks
STRING
1189 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| COQ8A | PDSS1 | Q5T2R2 | 988 |
| COQ8A | COQ9 | O75208 | 985 |
| COQ8A | COQ2 | Q96H96 | 984 |
| COQ8A | PDSS2 | Q86YH6 | 969 |
| COQ8A | COQ6 | Q9Y2Z9 | 964 |
| COQ8A | COQ4 | Q9Y3A0 | 919 |
| COQ8A | COQ7 | Q99807 | 887 |
| COQ8A | COQ5 | Q5HYK3 | 886 |
| COQ8A | APTX | Q7Z2E3 | 885 |
| COQ8A | COQ3 | Q9NZJ6 | 877 |
| COQ8A | ADCK2 | Q7Z695 | 729 |
| COQ8A | COQ10A | Q96MF6 | 676 |
| COQ8A | COQ10B | Q9H8M1 | 657 |
| COQ8A | ETFDH | Q16134 | 631 |
| COQ8A | ANO10 | Q9NW15 | 608 |
IntAct
314 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| COQ8A | TFIP11 | psi-mi:“MI:0915”(physical association) | 0.850 |
| RABAC1 | COQ8A | psi-mi:“MI:0915”(physical association) | 0.850 |
| TFIP11 | COQ8A | psi-mi:“MI:0915”(physical association) | 0.850 |
| COQ8A | RABAC1 | psi-mi:“MI:0915”(physical association) | 0.850 |
| COQ8A | SH3GLB1 | psi-mi:“MI:0915”(physical association) | 0.810 |
| SH3GLB1 | COQ8A | psi-mi:“MI:0915”(physical association) | 0.810 |
| COQ8A | REEP6 | psi-mi:“MI:0915”(physical association) | 0.780 |
| REEP6 | COQ8A | psi-mi:“MI:0915”(physical association) | 0.780 |
BioGRID (262): ADCK3 (Two-hybrid), ADCK3 (Two-hybrid), AGTRAP (Two-hybrid), TMEM159 (Two-hybrid), REEP6 (Two-hybrid), TMEM239 (Two-hybrid), ADCK3 (Affinity Capture-MS), ADCK3 (Two-hybrid), COQ5 (Co-fractionation), ADCK3 (Reconstituted Complex), ADCK3 (Reconstituted Complex), ADCK3 (Reconstituted Complex), ADCK3 (Reconstituted Complex), ADCK3 (Affinity Capture-MS), ADCK3 (Affinity Capture-MS)
ESM2 similar proteins: A0A179HKZ8, A0A2Z4HQ03, A2RAF6, A2WSH0, A3QJU3, A4RHN5, A7EGZ3, B2B2N5, C5E4D9, G4N2B5, G4YM00, H6WS94, O13861, O42653, O60111, P12063, P16638, P28669, P30628, P36101, P53396, P53585, P9WQI0, P9WQI1, Q05531, Q06567, Q0JLC5, Q0V3D6, Q18486, Q29RI0, Q2H0G2, Q3MIX3, Q4WYP6, Q5BJQ0, Q5RGU1, Q60936, Q6C8A3, Q6C9T3, Q6DW75, Q6YW62
Diamond homologs: A3QJU3, B1XWR5, P27697, Q18486, Q29RI0, Q54IH6, Q566J8, Q5BJQ0, Q5RGU1, Q5ZMT7, Q60936, Q6AY19, Q7NZD1, Q8NI60, Q92338, Q94BU1, Q96D53, Q9SBB2, A0A172M468, A3QIE3, C3K8U2, Q93Y08, A1V750, A2S8L4, A3MNU1, A3N5V1, A3NRJ7, B2JCV1, P9WQI0, P9WQI1, Q145N7, Q3JVZ2, Q3MIX3, Q5M7P6, Q62MP2, Q63X97, Q80V03, Q86TW2, Q9D0L4, A1JIF4
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
825 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 53 |
| Likely pathogenic | 47 |
| Uncertain significance | 297 |
| Likely benign | 257 |
| Benign | 45 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1027504 | NM_020247.5(COQ8A):c.589-3C>G | Pathogenic |
| 1027505 | NM_020247.5(COQ8A):c.127del (p.Leu43fs) | Pathogenic |
| 1075249 | NM_020247.5(COQ8A):c.629_630del (p.Arg210fs) | Pathogenic |
| 1186913 | NM_020247.5(COQ8A):c.127_128delinsA (p.Leu43fs) | Pathogenic |
| 1256286 | NM_020247.5(COQ8A):c.1660-1G>A | Pathogenic |
| 1408399 | NM_020247.5(COQ8A):c.491dup (p.His164fs) | Pathogenic |
| 1454457 | NM_020247.5(COQ8A):c.1266_1267insT (p.Lys423Ter) | Pathogenic |
| 1456268 | NM_020247.5(COQ8A):c.972G>A (p.Trp324Ter) | Pathogenic |
| 1458808 | NC_000001.10:g.(?227165130)(227174438_?)del | Pathogenic |
| 1460065 | NC_000001.10:g.(?227149087)(227174438_?)del | Pathogenic |
| 183336 | NM_020247.5(COQ8A):c.1744dup (p.Ser582fs) | Pathogenic |
| 1928062 | NM_020247.5(COQ8A):c.250_253del (p.Pro84fs) | Pathogenic |
| 1928840 | NM_020247.5(COQ8A):c.1681dup (p.Asp561fs) | Pathogenic |
| 210096 | NM_020247.5(COQ8A):c.1334_1335del (p.Thr445fs) | Pathogenic |
| 214046 | NM_020247.5(COQ8A):c.1844dup (p.Ser616fs) | Pathogenic |
| 242458 | NM_020247.5(COQ8A):c.1042C>T (p.Arg348Ter) | Pathogenic |
| 2578598 | NM_020247.5(COQ8A):c.947_948del (p.Leu316fs) | Pathogenic |
| 2631386 | NM_020247.5(COQ8A):c.1085del (p.Pro362fs) | Pathogenic |
| 2697995 | NM_020247.5(COQ8A):c.1232_1233del (p.Glu411fs) | Pathogenic |
| 2760714 | NM_020247.5(COQ8A):c.650del (p.Phe217fs) | Pathogenic |
| 2792753 | NM_020247.5(COQ8A):c.1632dup (p.Lys545fs) | Pathogenic |
| 280452 | NM_020247.5(COQ8A):c.1702G>T (p.Glu568Ter) | Pathogenic |
| 2986412 | NM_020247.5(COQ8A):c.1225C>T (p.Gln409Ter) | Pathogenic |
| 3062181 | NM_020247.5(COQ8A):c.1579dup (p.Arg527fs) | Pathogenic |
| 3248016 | NC_000001.10:g.(?227149087)(227149283_?)del | Pathogenic |
| 3254972 | NM_020247.5(COQ8A):c.210del (p.Asn71fs) | Pathogenic |
| 3638 | NM_020247.5(COQ8A):c.815G>T (p.Gly272Val) | Pathogenic |
| 3639 | NM_020247.5(COQ8A):c.815G>A (p.Gly272Asp) | Pathogenic |
| 3640 | NM_020247.5(COQ8A):c.1813dup (p.Glu605fs) | Pathogenic |
| 3641 | NM_020247.5(COQ8A):c.1398+2T>C | Pathogenic |
SpliceAI
2771 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 1:226961375:A:AG | acceptor_gain | 1.0000 |
| 1:226961376:G:GA | acceptor_gain | 1.0000 |
| 1:226961376:GC:G | acceptor_gain | 1.0000 |
| 1:226961376:GCC:G | acceptor_gain | 1.0000 |
| 1:226961376:GCCC:G | acceptor_gain | 1.0000 |
| 1:226961376:GCCCT:G | acceptor_gain | 1.0000 |
| 1:226961560:CAGGT:C | donor_loss | 1.0000 |
| 1:226961561:AGGTA:A | donor_loss | 1.0000 |
| 1:226961562:GGTAA:G | donor_loss | 1.0000 |
| 1:226964998:AG:A | acceptor_gain | 1.0000 |
| 1:226964999:GG:G | acceptor_gain | 1.0000 |
| 1:226965053:G:T | donor_gain | 1.0000 |
| 1:226965125:G:GG | donor_gain | 1.0000 |
| 1:226965407:GACG:G | donor_gain | 1.0000 |
| 1:226965411:G:GG | donor_gain | 1.0000 |
| 1:226965411:GTG:G | donor_loss | 1.0000 |
| 1:226965668:CA:C | acceptor_loss | 1.0000 |
| 1:226965669:A:AG | acceptor_gain | 1.0000 |
| 1:226965669:A:AT | acceptor_loss | 1.0000 |
| 1:226965670:G:GG | acceptor_gain | 1.0000 |
| 1:226965670:GCTCA:G | acceptor_gain | 1.0000 |
| 1:226965733:CGGAG:C | donor_loss | 1.0000 |
| 1:226965737:GGTA:G | donor_loss | 1.0000 |
| 1:226965738:G:GC | donor_loss | 1.0000 |
| 1:226965739:T:G | donor_loss | 1.0000 |
| 1:226977443:TTGCA:T | acceptor_loss | 1.0000 |
| 1:226977444:TGCA:T | acceptor_loss | 1.0000 |
| 1:226977445:GCAGG:G | acceptor_loss | 1.0000 |
| 1:226977446:CA:C | acceptor_loss | 1.0000 |
| 1:226977447:A:AC | acceptor_loss | 1.0000 |
AlphaMissense
4281 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 1:226984612:A:G | D488G | 1.000 |
| 1:226977455:C:A | A221D | 0.999 |
| 1:226982110:G:C | G272R | 0.999 |
| 1:226982120:T:A | L275H | 0.999 |
| 1:226982120:T:C | L275P | 0.999 |
| 1:226982122:A:G | K276E | 0.999 |
| 1:226982124:G:C | K276N | 0.999 |
| 1:226982124:G:T | K276N | 0.999 |
| 1:226982140:A:C | S282R | 0.999 |
| 1:226982142:C:A | S282R | 0.999 |
| 1:226982142:C:G | S282R | 0.999 |
| 1:226982964:C:A | A337D | 0.999 |
| 1:226982970:C:A | A339E | 0.999 |
| 1:226982978:G:T | G342W | 0.999 |
| 1:226982979:G:A | G342E | 0.999 |
| 1:226982987:C:G | H345D | 0.999 |
| 1:226983021:C:A | A356D | 0.999 |
| 1:226983026:A:G | K358E | 0.999 |
| 1:226983028:G:C | K358N | 0.999 |
| 1:226983028:G:T | K358N | 0.999 |
| 1:226983803:T:C | L402P | 0.999 |
| 1:226983830:A:T | E411V | 0.999 |
| 1:226983831:G:C | E411D | 0.999 |
| 1:226983831:G:T | E411D | 0.999 |
| 1:226984611:G:C | D488H | 0.999 |
| 1:226984612:A:T | D488V | 0.999 |
| 1:226984628:C:A | N493K | 0.999 |
| 1:226984628:C:G | N493K | 0.999 |
| 1:226984889:A:C | D507A | 0.999 |
| 1:226984889:A:T | D507V | 0.999 |
dbSNP variants (sampled 300 via entrez): RS1000036496 (1:226959762 G>A), RS1000066744 (1:226961810 G>A), RS1000163931 (1:226959531 G>A,C,T), RS1000249693 (1:226971510 G>A), RS1000279625 (1:226945466 T>A), RS1000309062 (1:226985440 GCC>G,GC,GCCC), RS1000318459 (1:226978715 CACACACCCACCTCATACCTGCACACCTCCTT>C), RS1000372381 (1:226965262 C>T), RS1000444018 (1:226977489 C>T), RS1000460974 (1:226964970 T>C), RS1000475151 (1:226970500 A>G), RS1000555881 (1:226959291 T>G), RS1000571928 (1:226964763 G>A), RS1000634936 (1:226976964 G>T), RS1000681417 (1:226982228 C>T)
Disease associations
OMIM: gene MIM:606980 | disease phenotypes: MIM:612016, MIM:614615, MIM:607426
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| coenzyme Q10 deficiency | Definitive | Autosomal recessive |
| autosomal recessive ataxia due to ubiquinone deficiency | Definitive | Autosomal recessive |
Mondo (8): autosomal recessive ataxia due to ubiquinone deficiency (MONDO:0012784), cerebellar ataxia (MONDO:0000437), pathologic nystagmus (MONDO:0004843), mitochondrial disease (MONDO:0044970), congenital nervous system disorder (MONDO:0002320), Joubert syndrome 17 (MONDO:0013824), coenzyme Q10 deficiency (MONDO:0018151), coenzyme Q10 deficiency, primary, 1 (MONDO:0011829)
Orphanet (6): Autosomal recessive ataxia due to ubiquinone deficiency (Orphanet:139485), Rare ataxia (Orphanet:102002), Mitochondrial disease (Orphanet:68380), Coenzyme Q10 deficiency (Orphanet:35656), Isolated Joubert syndrome (Orphanet:475), Leigh syndrome with nephrotic syndrome (Orphanet:255249)
HPO phenotypes
38 total (30 of 38 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000365 | Hearing impairment |
| HP:0000486 | Strabismus |
| HP:0000508 | Ptosis |
| HP:0000771 | Gynecomastia |
| HP:0001249 | Intellectual disability |
| HP:0001250 | Seizure |
| HP:0001251 | Ataxia |
| HP:0001252 | Hypotonia |
| HP:0001263 | Global developmental delay |
| HP:0001272 | Cerebellar atrophy |
| HP:0001332 | Dystonia |
| HP:0001336 | Myoclonus |
| HP:0001337 | Tremor |
| HP:0001347 | Hyperreflexia |
| HP:0001348 | Brisk reflexes |
| HP:0001761 | Pes cavus |
| HP:0002073 | Progressive cerebellar ataxia |
| HP:0002151 | Increased circulating lactate concentration |
| HP:0002342 | Moderate intellectual disability |
| HP:0002376 | Developmental regression |
| HP:0002490 | Increased CSF lactate |
| HP:0003128 | Lactic acidosis |
| HP:0003457 | EMG abnormality |
| HP:0003546 | Exercise intolerance |
| HP:0003593 | Infantile onset |
| HP:0003701 | Proximal muscle weakness |
| HP:0004696 | Talipes cavus equinovarus |
| HP:0007256 | Abnormal pyramidal sign |
| HP:0008936 | Axial hypotonia |
GWAS associations
21 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST004608_46 | Granulocyte percentage of myeloid white cells | 4.000000e-12 |
| GCST004613_4 | Sum neutrophil eosinophil counts | 7.000000e-13 |
| GCST004614_121 | Granulocyte count | 1.000000e-12 |
| GCST004620_9 | Sum basophil neutrophil counts | 4.000000e-13 |
| GCST004629_16 | Neutrophil count | 3.000000e-13 |
| GCST004632_125 | Lymphocyte percentage of white cells | 3.000000e-11 |
| GCST007876_41 | Estimated glomerular filtration rate | 4.000000e-08 |
| GCST009391_978 | Metabolite levels | 3.000000e-06 |
| GCST009963_3 | Cataracts (operation) | 6.000000e-12 |
| GCST010002_355 | Refractive error | 1.000000e-12 |
| GCST010320_118 | PR interval | 3.000000e-14 |
| GCST010321_182 | PR interval | 2.000000e-14 |
| GCST010396_310 | Gut microbiota (bacterial taxa, hurdle binary method) | 6.000000e-06 |
| GCST012013_19 | Cataracts | 3.000000e-15 |
| GCST012013_6 | Cataracts | 1.000000e-20 |
| GCST90002389_97 | Lymphocyte percentage of white cells | 3.000000e-17 |
| GCST90002397_754 | Mean spheric corpuscular volume | 7.000000e-10 |
| GCST90014268_6 | Cataracts | 2.000000e-33 |
| GCST90020024_851 | A body shape index | 1.000000e-08 |
| GCST90020029_598 | Waist circumference adjusted for body mass index | 4.000000e-13 |
| GCST90020029_599 | Waist circumference adjusted for body mass index | 3.000000e-12 |
EFO canonical traits (10, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0007997 | granulocyte percentage of myeloid white cells |
| EFO:0004833 | neutrophil count |
| EFO:0004842 | eosinophil count |
| EFO:0007987 | granulocyte count |
| EFO:0005090 | basophil count |
| EFO:0007993 | lymphocyte percentage of leukocytes |
| EFO:0010538 | taurocholate measurement |
| EFO:0004462 | PR interval |
| EFO:0007874 | gut microbiome measurement |
| EFO:0007789 | BMI-adjusted waist circumference |
MeSH disease descriptors (4)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D002524 | Cerebellar Ataxia | C10.228.140.252.190; C10.597.350.090.500; C23.888.592.350.090.200 |
| D009759 | Nystagmus, Pathologic | C10.292.562.675; C11.590.400 |
| C564403 | Coenzyme Q10 Deficiency (supp.) | |
| C567436 | Spinocerebellar Ataxia, Autosomal Recessive 9 (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL5550 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
14 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 174,040 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL1287853 | FEDRATINIB | 4 | 3,554 |
| CHEMBL24828 | VANDETANIB | 4 | 42,230 |
| CHEMBL5416410 | DASATINIB | 4 | 655 |
| CHEMBL553 | ERLOTINIB | 4 | 108,300 |
| CHEMBL217092 | SARACATINIB | 3 | 3,982 |
| CHEMBL31965 | CANERTINIB | 3 | 8,083 |
| CHEMBL230011 | TG100-115 | 2 | 1,504 |
| CHEMBL2364611 | GALUNISERTIB | 2 | 1,929 |
| CHEMBL253969 | OSI-632 | 2 | 1,150 |
| CHEMBL475251 | R-406 | 2 | 762 |
| CHEMBL564829 | MILCICLIB | 2 | 821 |
| CHEMBL1230122 | R-1487 | 1 | 42 |
| CHEMBL482967 | CYC-116 | 1 | 651 |
| CHEMBL551064 | AEW-541 | 1 | 377 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — ABC1-B subfamily
Binding affinities (BindingDB)
5 measured of 5 human assays (5 total across all organisms); most potent 5 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value |
|---|---|---|
| BMS-354825 | KD | 27 nM |
| N-(4-bromo-2-fluorophenyl)-6-methoxy-7-[(1-methylpiperidin-4-yl)methoxy]quinazolin-4-amine | KD | 150 nM |
| ERLOTINIB HYDROCHLORIDE | KD | 1200 nM |
| CI-1033 | KD | 1700 nM |
| 1-Acyl-1H-[1,2,4]triazole-3,5-diamine Analogue 3b | KD | 3100 nM |
ChEMBL bioactivities
40 potent at pChembl≥5 of 42 total, top 34 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 7.18 | Kd | 66 | nM | CHEMBL4575895 |
| 7.03 | Kd | 94 | nM | TG100-115 |
| 6.77 | Kd | 170 | nM | CHEMBL4556662 |
| 6.77 | Kd | 170 | nM | CHEMBL4585158 |
| 6.72 | Kd | 190 | nM | CHEMBL4517424 |
| 6.72 | Kd | 190 | nM | CHEMBL4443342 |
| 6.72 | Kd | 190 | nM | DASATINIB |
| 6.66 | Kd | 220 | nM | CHEMBL535429 |
| 6.60 | Kd | 250 | nM | CHEMBL311959 |
| 6.58 | Kd | 260 | nM | CHEMBL4443342 |
| 6.56 | Kd | 275 | nM | SARACATINIB |
| 6.52 | Kd | 300 | nM | CHEMBL535429 |
| 6.50 | Kd | 320 | nM | R-1487 |
| 6.46 | Kd | 347 | nM | CHEMBL3752910 |
| 6.41 | ED50 | 389.6 | nM | CHEMBL3752910 |
| 6.31 | Kd | 490 | nM | CHEMBL2425628 |
| 6.13 | Kd | 740 | nM | CHEMBL530635 |
| 6.08 | Kd | 835 | nM | AEW-541 |
| 6.04 | Kd | 910 | nM | CHEMBL386051 |
| 5.96 | Kd | 1100 | nM | R-406 |
| 5.92 | Kd | 1200 | nM | CHEMBL4586530 |
| 5.92 | Kd | 1200 | nM | JNJ-7706621 |
| 5.82 | Kd | 1500 | nM | CANERTINIB |
| 5.77 | Kd | 1700 | nM | TAE-684 |
| 5.72 | Kd | 1900 | nM | ERLOTINIB |
| 5.70 | Kd | 2000 | nM | CHEMBL4592501 |
| 5.52 | Kd | 3012 | nM | MILCICLIB |
| 5.51 | Kd | 3053 | nM | OSI-632 |
| 5.50 | Kd | 3200 | nM | CHEMBL1241674 |
| 5.39 | Kd | 4100 | nM | CHEMBL4586588 |
| 5.35 | Kd | 4500 | nM | VANDETANIB |
| 5.16 | Kd | 7000 | nM | FEDRATINIB |
| 5.12 | Kd | 7639 | nM | CHEMBL5653589 |
| 5.07 | ED50 | 8576 | nM | CHEMBL5653589 |
PubChem BioAssay actives
38 with measured affinity, of 456 total; 31 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 4-(3,4,5-trimethoxyanilino)quinoline-7-carbonitrile | 1638750: Binding affinity to biotinylated full length human ADCK3 expressed in Escherichia coli incubated for 1.5 hrs by fluorescent tracer dependent TR-FRET based competitive ligand binding displacement assay | kd | 0.0660 | uM |
| 3-[2,4-diamino-7-(3-hydroxyphenyl)pteridin-6-yl]phenol | 625116: Binding constant for ADCK3 kinase domain | kd | 0.0940 | uM |
| 6-chloro-N-(3,4,5-trimethoxyphenyl)quinolin-4-amine | 1638750: Binding affinity to biotinylated full length human ADCK3 expressed in Escherichia coli incubated for 1.5 hrs by fluorescent tracer dependent TR-FRET based competitive ligand binding displacement assay | kd | 0.1700 | uM |
| 4-(3,4,5-trimethoxyanilino)quinoline-6-carbonitrile | 1638750: Binding affinity to biotinylated full length human ADCK3 expressed in Escherichia coli incubated for 1.5 hrs by fluorescent tracer dependent TR-FRET based competitive ligand binding displacement assay | kd | 0.1700 | uM |
| N-(2-chloro-6-methylphenyl)-2-[[6-[4-(2-hydroxyethyl)piperazin-1-yl]-2-methylpyrimidin-4-yl]amino]-1,3-thiazole-5-carboxamide;hydrate | 435516: Binding constant for ADCK3 kinase domain | kd | 0.1900 | uM |
| 6-bromo-N-(3,4,5-trimethoxyphenyl)quinolin-4-amine | 1638750: Binding affinity to biotinylated full length human ADCK3 expressed in Escherichia coli incubated for 1.5 hrs by fluorescent tracer dependent TR-FRET based competitive ligand binding displacement assay | kd | 0.1900 | uM |
| 6-iodo-N-(3,4,5-trimethoxyphenyl)quinolin-4-amine | 1638750: Binding affinity to biotinylated full length human ADCK3 expressed in Escherichia coli incubated for 1.5 hrs by fluorescent tracer dependent TR-FRET based competitive ligand binding displacement assay | kd | 0.1900 | uM |
| 6-(trifluoromethyl)-N-(3,4,5-trimethoxyphenyl)quinolin-4-amine | 1638750: Binding affinity to biotinylated full length human ADCK3 expressed in Escherichia coli incubated for 1.5 hrs by fluorescent tracer dependent TR-FRET based competitive ligand binding displacement assay | kd | 0.2200 | uM |
| 6,7-dimethoxy-N-(3,4,5-trimethoxyphenyl)quinolin-4-amine | 1638750: Binding affinity to biotinylated full length human ADCK3 expressed in Escherichia coli incubated for 1.5 hrs by fluorescent tracer dependent TR-FRET based competitive ligand binding displacement assay | kd | 0.2500 | uM |
| N-(5-chloro-1,3-benzodioxol-4-yl)-7-[2-(4-methylpiperazin-1-yl)ethoxy]-5-(oxan-4-yloxy)quinazolin-4-amine | 1424905: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 0.2750 | uM |
| 6-(2,4-difluorophenoxy)-8-methyl-2-(oxan-4-ylamino)pyrido[2,3-d]pyrimidin-7-one | 592320: Inhibition of ADCK3 | kd | 0.3200 | uM |
| 4-methyl-3-[(1-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2147806: Binding affinity to human ADCK3 incubated for 45 mins by Kinobead based pull down assay | kd | 0.3470 | uM |
| (4-hydroxypiperidin-1-yl)-[4-[[4-[4-(3-methylsulfonylpropoxy)indol-1-yl]pyrimidin-2-yl]amino]cyclohexyl]methanone | 769540: Binding affinity to ADCK3 (unknown origin) | kd | 0.4900 | uM |
| 6-tert-butyl-N-(3,4,5-trimethoxyphenyl)quinolin-4-amine | 1638750: Binding affinity to biotinylated full length human ADCK3 expressed in Escherichia coli incubated for 1.5 hrs by fluorescent tracer dependent TR-FRET based competitive ligand binding displacement assay | kd | 0.7400 | uM |
| 7-[3-(azetidin-1-yl)cyclobutyl]-5-(3-phenylmethoxyphenyl)pyrrolo[2,3-d]pyrimidin-4-amine | 1424905: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 0.8350 | uM |
| 6-(2,6-dichlorophenyl)-8-methyl-2-(3-methylsulfanylanilino)pyrido[2,3-d]pyrimidin-7-one | 625116: Binding constant for ADCK3 kinase domain | kd | 0.9100 | uM |
| 6-[[5-fluoro-2-(3,4,5-trimethoxyanilino)pyrimidin-4-yl]amino]-2,2-dimethyl-4H-pyrido[3,2-b][1,4]oxazin-3-one | 625116: Binding constant for ADCK3 kinase domain | kd | 1.1000 | uM |
| 7-methoxy-N-(3,4,5-trimethoxyphenyl)quinolin-4-amine | 1638750: Binding affinity to biotinylated full length human ADCK3 expressed in Escherichia coli incubated for 1.5 hrs by fluorescent tracer dependent TR-FRET based competitive ligand binding displacement assay | kd | 1.2000 | uM |
| 4-[[5-amino-1-(2,6-difluorobenzoyl)-1,2,4-triazol-3-yl]amino]benzenesulfonamide | 435516: Binding constant for ADCK3 kinase domain | kd | 1.2000 | uM |
| N-[4-(3-chloro-4-fluoroanilino)-7-(3-morpholin-4-ylpropoxy)quinazolin-6-yl]prop-2-enamide | 435516: Binding constant for ADCK3 kinase domain | kd | 1.5000 | uM |
| 5-chloro-2-N-[2-methoxy-4-[4-(4-methylpiperazin-1-yl)piperidin-1-yl]phenyl]-4-N-(2-propan-2-ylsulfonylphenyl)pyrimidine-2,4-diamine | 625116: Binding constant for ADCK3 kinase domain | kd | 1.7000 | uM |
| Erlotinib | 435516: Binding constant for ADCK3 kinase domain | kd | 1.9000 | uM |
| 6-methoxy-N-(3,4,5-trimethoxyphenyl)quinolin-4-amine | 1638750: Binding affinity to biotinylated full length human ADCK3 expressed in Escherichia coli incubated for 1.5 hrs by fluorescent tracer dependent TR-FRET based competitive ligand binding displacement assay | kd | 2.0000 | uM |
| N,1,4,4-tetramethyl-8-[4-(4-methylpiperazin-1-yl)anilino]-5H-pyrazolo[4,5-h]quinazoline-3-carboxamide | 1424905: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 3.0120 | uM |
| 3-[(4-bromo-2,6-difluorophenyl)methoxy]-5-(4-pyrrolidin-1-ylbutylcarbamoylamino)-1,2-thiazole-4-carboxamide | 1424905: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 3.0530 | uM |
| 2-(4-amino-1-propan-2-ylpyrazolo[3,4-d]pyrimidin-3-yl)-1H-indol-5-ol | 625116: Binding constant for ADCK3 kinase domain | kd | 3.2000 | uM |
| N-(3,4,5-trimethoxyphenyl)quinolin-4-amine | 1638750: Binding affinity to biotinylated full length human ADCK3 expressed in Escherichia coli incubated for 1.5 hrs by fluorescent tracer dependent TR-FRET based competitive ligand binding displacement assay | kd | 4.1000 | uM |
| Vandetanib | 435516: Binding constant for ADCK3 kinase domain | kd | 4.5000 | uM |
| Fedratinib | 625116: Binding constant for ADCK3 kinase domain | kd | 7.0000 | uM |
| 4-methyl-3-[(2-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2147806: Binding affinity to human ADCK3 incubated for 45 mins by Kinobead based pull down assay | kd | 7.6389 | uM |
| 4-methyl-5-[2-(4-morpholin-4-ylanilino)pyrimidin-4-yl]-1,3-thiazol-2-amine | 1424905: Kinobeads (epsilon), multiple immobilized ATP-competitive broad spectrum kinase inhibitors, used to assess residual binding of ~300 proteins simultaneously from cell lysate in the presence of a compound. Quantitative readout performed by mass spectrometry. | kd | 65.3020 | uM |
CTD chemical–gene interactions
46 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Cisplatin | affects cotreatment, increases expression, decreases reaction | 3 |
| Acetaminophen | decreases expression | 2 |
| Benzo(a)pyrene | affects methylation, decreases expression | 2 |
| Cyclosporine | decreases expression | 2 |
| aristolochic acid I | decreases expression | 1 |
| bisphenol F | affects cotreatment, increases methylation | 1 |
| triphenyl phosphate | affects expression | 1 |
| pirinixic acid | affects binding, increases activity, increases expression | 1 |
| deoxynivalenol | decreases expression | 1 |
| kojic acid | increases expression | 1 |
| beta-lapachone | increases expression | 1 |
| sodium arsenite | decreases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| perfluorooctane sulfonic acid | increases expression | 1 |
| K 7174 | decreases expression | 1 |
| ICG 001 | decreases expression | 1 |
| MRK 003 | increases expression | 1 |
| jinfukang | affects cotreatment, increases expression | 1 |
| NSC 689534 | affects binding, decreases expression | 1 |
| Resveratrol | affects cotreatment, increases expression | 1 |
| Temozolomide | increases expression | 1 |
| Fulvestrant | affects cotreatment, increases methylation | 1 |
| Artesunate | decreases response to substance | 1 |
| Atrazine | increases expression | 1 |
| Cadmium | increases expression | 1 |
| Carbonyl Cyanide p-Trifluoromethoxyphenylhydrazone | increases expression | 1 |
| Copper | affects binding, decreases expression | 1 |
| Diuron | decreases expression | 1 |
| Doxorubicin | increases expression | 1 |
| Estradiol | affects expression | 1 |
ChEMBL screening assays
93 unique, capped per target: 93 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1032243 | Binding | Inhibition of ADCK3 at 3 uM | Discovery of substituted 4-(pyrazol-4-yl)-phenylbenzodioxane-2-carboxamides as potent and highly selective Rho kinase (ROCK-II) inhibitors. — J Med Chem |
Cellosaurus cell lines
4 cell lines: 2 cancer cell line, 1 transformed cell line, 1 finite cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B2UZ | Abcam HEK293T COQ8A KO | Transformed cell line | Female |
| CVCL_EZ67 | ND41007 | Finite cell line | Female |
| CVCL_SB61 | HAP1 COQ8A (-) 1 | Cancer cell line | Male |
| CVCL_SB62 | HAP1 COQ8A (-) 2 | Cancer cell line | Male |
Clinical trials (associated diseases)
154 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00950196 | PHASE4 | COMPLETED | Amantadine for Improving Neurologic Symptoms in Ataxia-Telangiectasia |
| NCT04107740 | PHASE4 | COMPLETED | C-Trelin Orally Disintegrated(OD) Tablet 5mg in Ataxia Due to Spinocerebellar Degeneration |
| NCT03351998 | PHASE4 | COMPLETED | Impact of Statin Therapy on Muscle Mitochondrial Function and Aerobic Capacity |
| NCT01970098 | PHASE3 | COMPLETED | A Confirmatory Study of KPS-0373 in Patients With Spinocerebellar Degeneration (SCD) |
| NCT01970111 | PHASE3 | COMPLETED | An Extension Study of KPS-0373 in Patients With Spinocerebellar Degeneration (SCD) |
| NCT01970124 | PHASE3 | COMPLETED | A Long-Term Study of KPS-0373 in Patients With Spinocerebellar Degeneration (SCD) |
| NCT01970137 | PHASE3 | COMPLETED | A 24-week Open-label Study of KPS-0373 in Patients With Spinocerebellar Degeneration (SCD) |
| NCT02889302 | PHASE3 | COMPLETED | An Additional Confirmatory Study of KPS-0373 in Patients With Spinocerebellar Degeneration (SCD) |
| NCT03408080 | PHASE3 | ACTIVE_NOT_RECRUITING | Open Pilot Trial of BHV-4157 |
| NCT03701399 | PHASE3 | ACTIVE_NOT_RECRUITING | Troriluzole in Adult Participants With Spinocerebellar Ataxia |
| NCT03901638 | PHASE3 | TERMINATED | Tllsh2910 for Ataxia and Gut Microbiota Alteration in Patients of Multiple System Atrophy |
| NCT07040137 | PHASE3 | RECRUITING | Confirmatory Study 3 of KPS-0373 in Patients With Spinocerebellar Degeneration |
| NCT00432744 | PHASE3 | COMPLETED | Phase III Trial of Coenzyme Q10 in Mitochondrial Disease |
| NCT05162768 | PHASE3 | COMPLETED | Study to Evaluate Efficacy and Safety of Elamipretide in Subjects With Primary Mitochondrial Disease From Nuclear DNA Mutations (nPMD) |
| NCT06451757 | PHASE3 | RECRUITING | KHENERFIN Study: A Trial to Evaluate the Efficacy and Safety of Sonlicromanol in Primary Mitochondrial Diseases |
| NCT00034242 | PHASE2 | COMPLETED | High-Dose Intravenous Immunoglobulin to Treat Cerebellar Degeneration |
| NCT00202397 | PHASE2 | COMPLETED | Effect of Riluzole as a Symptomatic Approach in Patients With Chronic Cerebellar Ataxia |
| NCT00863538 | PHASE2 | COMPLETED | Phase II Study of KPS-0373 in Patients With Spinocerebellar Degeneration (SCD) |
| NCT01004016 | PHASE2 | COMPLETED | A Study of KPS-0373 in Patients With Spinocerebellar Degeneration (SCD) |
| NCT01350440 | PHASE2 | COMPLETED | Safety and Efficacy of Intravenous Immune Globulin in Treating Spinocerebellar Ataxia |
| NCT02540655 | PHASE2 | COMPLETED | Efficacy and Safety Study of Stemchymal® in Polyglutamine Spinocerebellar Ataxia |
| NCT03932669 | PHASE2 | COMPLETED | Effect of Nilotinib in Cerebellar Ataxia Patients |
| NCT04301284 | PHASE2 | WITHDRAWN | Study of CAD-1883 for Spinocerebellar Ataxia |
| NCT05125666 | PHASE2 | UNKNOWN | Efficacy of Dual Task Training on Children With Ataxia After Medulloblastoma Resection |
| NCT06397274 | PHASE2 | NOT_YET_RECRUITING | Stemchymal® for Polyglutamine Spinocerebellar Ataxia |
| NCT02398201 | PHASE2 | COMPLETED | A Study of Bezafibrate in Mitochondrial Myopathy |
| NCT00683943 | PHASE1 | COMPLETED | Lithium Treatment for Patients With Spinocerebellar Ataxia Type I |
| NCT02287064 | PHASE1 | UNKNOWN | An Open-label Trial of Intravenous Immune Globulin (IVIG)in Treating Spinocerebellar Ataxias |
| NCT05157802 | PHASE1 | ACTIVE_NOT_RECRUITING | Promoting Physical Activity Engagement for People With Early-stage Cerebellar Ataxia |
| NCT05554835 | Not specified | RECRUITING | Global Registry and Natural History Study for Mitochondrial Disorders |
| NCT01793168 | Not specified | RECRUITING | Rare Disease Patient Registry & Natural History Study - Coordination of Rare Diseases at Sanford |
| NCT01104649 | PHASE2/PHASE3 | COMPLETED | Efficacy of Riluzole in Hereditary Cerebellar Ataxia |
| NCT02960893 | PHASE2/PHASE3 | COMPLETED | Trial in Adult Participants With Spinocerebellar Ataxia (SCA) |
| NCT00244361 | PHASE1/PHASE2 | COMPLETED | Effectiveness of Rituximab in Pediatric OMS Patients. |
| NCT01649687 | PHASE1/PHASE2 | COMPLETED | Treatment of Cerebellar Ataxia With Mesenchymal Stem Cells |
| NCT01958177 | PHASE1/PHASE2 | UNKNOWN | Clinical Study to Evaluate the Safety and Efficacy BMMNC in Cerebellar Ataxia |
| NCT02829268 | PHASE1/PHASE2 | COMPLETED | A Clinical Trial of Dantrolene Sodium in Pediatric and Adult Patients With Wolfram Syndrome |
| NCT00001324 | Not specified | COMPLETED | PET Scan to Study Brain Control of Human Movement |
| NCT00006492 | Not specified | COMPLETED | Gluten-Free Diet in Patients With Gluten Sensitivity and Cerebellar Ataxia |
| NCT00136630 | Not specified | COMPLETED | Natural History, Genetic Bases and Phenotype-genotype Correlations in Autosomal Dominant Spinocerebellar Degenerations |
Related Atlas pages
- Associated diseases: coenzyme Q10 deficiency, autosomal recessive ataxia due to ubiquinone deficiency
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): autosomal recessive ataxia due to ubiquinone deficiency, cataract, cerebellar ataxia, coenzyme Q10 deficiency, coenzyme Q10 deficiency, primary, 1, congenital nervous system disorder, Joubert syndrome 17, mitochondrial disease, pathologic nystagmus