CSGALNACT1-AS1

Summary

CSGALNACT1-AS1 (CSGALNACT1 antisense RNA 1, HGNC:58187) is a long non-coding RNA gene on chromosome 8p21.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58187
Approved symbol	CSGALNACT1-AS1
Name	CSGALNACT1 antisense RNA 1
Location	8p21.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000253270
Ensembl biotype	lncRNA
Entrez	124901899
RNAcentral	URS0002A3C9DE — lncRNA, 1128 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000519803

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000519803 — 2 exons

Exon	Start	End
ENSE00004265812	19688724	19689562
ENSE00004265813	19678539	19678827

Expression profiles

Bgee: expression breadth broad, 94 present calls, max score 72.73.

Top tissues by expression

94 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	72.73	gold quality
placenta	UBERON:0001987	70.65	gold quality
heart left ventricle	UBERON:0002084	70.57	gold quality
bone marrow cell	CL:0002092	69.80	silver quality
calcaneal tendon	UBERON:0003701	68.19	gold quality
bone marrow	UBERON:0002371	66.49	silver quality
heart	UBERON:0000948	66.05	gold quality
blood	UBERON:0000178	61.10	gold quality
islet of Langerhans	UBERON:0000006	59.08	gold quality
corpus callosum	UBERON:0002336	58.79	gold quality
urinary bladder	UBERON:0001255	58.59	gold quality
liver	UBERON:0002107	58.18	gold quality
muscle of leg	UBERON:0001383	57.03	gold quality
monocyte	CL:0000576	56.95	gold quality
tonsil	UBERON:0002372	55.44	silver quality
pancreas	UBERON:0001264	55.35	gold quality
adult mammalian kidney	UBERON:0000082	55.22	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	54.77	gold quality
prostate gland	UBERON:0002367	54.43	gold quality
right atrium auricular region	UBERON:0006631	54.33	gold quality
kidney	UBERON:0002113	54.27	gold quality
cerebellar cortex	UBERON:0002129	53.58	gold quality
lung	UBERON:0002048	53.54	gold quality
superior frontal gyrus	UBERON:0002661	53.09	gold quality
adrenal tissue	UBERON:0018303	52.71	gold quality
body of pancreas	UBERON:0001150	51.99	gold quality
primary visual cortex	UBERON:0002436	51.88	gold quality
multicellular organism	UBERON:0000468	51.22	gold quality
gastrocnemius	UBERON:0001388	50.21	gold quality
stomach	UBERON:0000945	49.77	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.96

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.