CSNK1G2-AS1

Summary

CSNK1G2-AS1 (CSNK1G2 antisense RNA 1, HGNC:28604) is a long non-coding RNA gene on chromosome 19p13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:28604
Approved symbol	CSNK1G2-AS1
Name	CSNK1G2 antisense RNA 1
Location	19p13.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	MGC39696
Ensembl gene	ENSG00000180846
Ensembl biotype	lncRNA
Entrez	255193
RNAcentral	URS000075CFAE — lncRNA, 1313 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000586395

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000586395 — 3 exons

Exon	Start	End
ENSE00002745792	1952589	1953011
ENSE00002913998	1953843	1954586
ENSE00003717381	1953386	1953506

Expression profiles

Bgee: expression breadth ubiquitous, 102 present calls, max score 74.87.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0144 / max 13.0815, expressed in 3 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
178096	0.0144	3

Top tissues by expression

201 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
left testis	UBERON:0004533	74.87	gold quality
right testis	UBERON:0004534	73.57	gold quality
sural nerve	UBERON:0015488	72.16	silver quality
testis	UBERON:0000473	71.78	gold quality
bone marrow cell	CL:0002092	69.00	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	64.90	gold quality
ventricular zone	UBERON:0003053	59.52	gold quality
granulocyte	CL:0000094	59.14	gold quality
hindlimb stylopod muscle	UBERON:0004252	58.23	silver quality
blood	UBERON:0000178	57.98	gold quality
monocyte	CL:0000576	56.94	gold quality
ganglionic eminence	UBERON:0004023	56.30	silver quality
stromal cell of endometrium	CL:0002255	55.71	gold quality
parotid gland	UBERON:0001831	55.35	gold quality
skin of hip	UBERON:0001554	51.84	silver quality
bone marrow	UBERON:0002371	51.33	gold quality
upper leg skin	UBERON:0004262	49.78	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	48.65	gold quality
right lung	UBERON:0002167	47.94	gold quality
muscle of leg	UBERON:0001383	47.44	gold quality
right lobe of liver	UBERON:0001114	47.07	silver quality
lymph node	UBERON:0000029	46.94	silver quality
gastrocnemius	UBERON:0001388	46.66	gold quality
prefrontal cortex	UBERON:0000451	46.24	silver quality
tonsil	UBERON:0002372	46.12	gold quality
adrenal tissue	UBERON:0018303	46.01	silver quality
anatomical system	UBERON:0000467	45.85	gold quality
multicellular organism	UBERON:0000468	45.66	gold quality
material anatomical entity	UBERON:0000465	45.64	gold quality
vermiform appendix	UBERON:0001154	45.55	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.27

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.