CSRP1-AS1

Summary

CSRP1-AS1 (CSRP1 antisense RNA 1, HGNC:55856) is a long non-coding RNA gene on chromosome 1q32.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55856
Approved symbol	CSRP1-AS1
Name	CSRP1 antisense RNA 1
Location	1q32.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	AC096677.1
Ensembl gene	ENSG00000224536
Ensembl biotype	lncRNA
Entrez	107985246
RNAcentral	URS0000E60B11 — lncRNA, 2633 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 22 — 22 lncRNA

ENST00000441932, ENST00000454651, ENST00000648727, ENST00000846697, ENST00000846698, ENST00000846699, ENST00000846700, ENST00000846701, ENST00000846702, ENST00000846703, ENST00000846768, ENST00000846769, ENST00000846770, ENST00000846771, ENST00000846772, ENST00000846773, ENST00000846774, ENST00000846775, ENST00000846776, ENST00000846777, ENST00000846778, ENST00000846779

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000441932 — 2 exons

Exon	Start	End
ENSE00001441224	201530094	201530474
ENSE00001691355	201518703	201520650

Expression profiles

Bgee: expression breadth ubiquitous, 130 present calls, max score 83.23.

Top tissues by expression

130 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	83.23	gold quality
mucosa of transverse colon	UBERON:0004991	79.08	gold quality
pituitary gland	UBERON:0000007	76.73	gold quality
right lobe of liver	UBERON:0001114	76.56	gold quality
adenohypophysis	UBERON:0002196	76.29	gold quality
right lobe of thyroid gland	UBERON:0001119	75.56	gold quality
left lobe of thyroid gland	UBERON:0001120	75.16	gold quality
thyroid gland	UBERON:0002046	75.04	gold quality
substantia nigra	UBERON:0002038	74.10	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	73.55	gold quality
liver	UBERON:0002107	72.73	gold quality
apex of heart	UBERON:0002098	71.67	gold quality
granulocyte	CL:0000094	71.06	gold quality
body of pancreas	UBERON:0001150	70.43	gold quality
pancreas	UBERON:0001264	70.35	gold quality
islet of Langerhans	UBERON:0000006	70.29	gold quality
Ammon’s horn	UBERON:0001954	70.23	gold quality
bone marrow cell	CL:0002092	69.99	silver quality
hypothalamus	UBERON:0001898	69.85	gold quality
putamen	UBERON:0001874	69.77	gold quality
heart left ventricle	UBERON:0002084	69.76	gold quality
transverse colon	UBERON:0001157	69.10	gold quality
primary visual cortex	UBERON:0002436	69.07	gold quality
myometrium	UBERON:0001296	68.99	gold quality
right uterine tube	UBERON:0001302	68.69	gold quality
rectum	UBERON:0001052	68.66	gold quality
amygdala	UBERON:0001876	68.63	gold quality
temporal lobe	UBERON:0001871	68.57	gold quality
endometrium	UBERON:0001295	68.40	gold quality
fundus of stomach	UBERON:0001160	68.36	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.63

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.