CT62

Summary

CT62 (cancer/testis associated 62, HGNC:27286) is a long non-coding RNA gene on chromosome 15q23.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:27286
Approved symbol	CT62
Name	cancer/testis associated 62
Location	15q23
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000225362
Ensembl biotype	lncRNA
Entrez	196993
RNAcentral	URS0001BBE3ED — lncRNA, 1835 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000564862, ENST00000566432, ENST00000567117, ENST00000648023, ENST00000809331, ENST00000809332, ENST00000809333

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000564862 — 2 exons

Exon	Start	End
ENSE00002576441	71110560	71111056
ENSE00002597860	71111232	71111426

Expression profiles

Bgee: expression breadth ubiquitous, 105 present calls, max score 88.44.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0437 / max 37.8911, expressed in 4 samples.

FANTOM5 promoters (3 alternative TSS)

Promoter ID	TPM avg	Samples expressed
150748	0.0239	3
150749	0.0152	4
150747	0.0046	3

Top tissues by expression

238 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sperm	CL:0000019	88.44	silver quality
left testis	UBERON:0004533	86.64	gold quality
male germ cell	CL:0000015	86.05	silver quality
right testis	UBERON:0004534	84.95	gold quality
testis	UBERON:0000473	84.36	gold quality
buccal mucosa cell	CL:0002336	82.06	gold quality
adult organism	UBERON:0007023	75.53	gold quality
frontal pole	UBERON:0002795	65.29	gold quality
paraflocculus	UBERON:0005351	65.06	gold quality
middle frontal gyrus	UBERON:0002702	65.01	gold quality
trabecular bone tissue	UBERON:0002483	62.11	gold quality
hindlimb stylopod muscle	UBERON:0004252	60.33	gold quality
apex of heart	UBERON:0002098	59.40	gold quality
endometrium epithelium	UBERON:0004811	58.67	gold quality
vena cava	UBERON:0004087	58.01	gold quality
myocardium	UBERON:0002349	56.72	gold quality
nasal cavity epithelium	UBERON:0005384	56.44	gold quality
heart left ventricle	UBERON:0002084	55.48	gold quality
cardiac ventricle	UBERON:0002082	54.95	gold quality
cortical plate	UBERON:0005343	53.87	silver quality
bone marrow cell	CL:0002092	53.57	gold quality
oviduct epithelium	UBERON:0004804	53.47	gold quality
sural nerve	UBERON:0015488	53.43	silver quality
tibial nerve	UBERON:0001323	53.14	gold quality
heart	UBERON:0000948	52.90	gold quality
right uterine tube	UBERON:0001302	52.85	gold quality
mammary duct	UBERON:0001765	52.68	gold quality
epithelium of mammary gland	UBERON:0003244	52.68	gold quality
rectum	UBERON:0001052	52.32	gold quality
thymus	UBERON:0002370	51.69	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.29

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.