CT69

Summary

CT69 (cancer/testis associated transcript 69, HGNC:37196) is a long non-coding RNA gene on chromosome 6q23.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:37196
Approved symbol	CT69
Name	cancer/testis associated transcript 69
Location	6q23.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000231971
Ensembl biotype	lncRNA
Entrez	101928231
RNAcentral	URS00007E33EF — lncRNA, 1201 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 26 — 26 lncRNA

ENST00000417483, ENST00000422736, ENST00000653974, ENST00000655225, ENST00000656511, ENST00000657570, ENST00000659858, ENST00000660051, ENST00000661465, ENST00000664953, ENST00000667818, ENST00000668601, ENST00000718375, ENST00000718376, ENST00000718377, ENST00000718378, ENST00000718379, ENST00000718380, ENST00000718381, ENST00000718382, ENST00000718383, ENST00000718384, ENST00000718385, ENST00000718386, ENST00000718387, ENST00000718388

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000417483 — 5 exons

Exon	Start	End
ENSE00001598801	134475116	134475225
ENSE00001603855	134428240	134429215
ENSE00001625319	134447934	134448001
ENSE00001717108	134454453	134454581
ENSE00001763750	134520509	134520585

Expression profiles

Bgee: expression breadth ubiquitous, 139 present calls, max score 81.78.

Top tissues by expression

232 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sural nerve	UBERON:0015488	81.78	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	78.86	silver quality
colonic epithelium	UBERON:0000397	73.64	gold quality
left testis	UBERON:0004533	72.05	gold quality
right testis	UBERON:0004534	72.01	gold quality
testis	UBERON:0000473	69.87	gold quality
ventricular zone	UBERON:0003053	65.93	gold quality
bone marrow cell	CL:0002092	65.21	silver quality
cortical plate	UBERON:0005343	65.03	gold quality
ganglionic eminence	UBERON:0004023	63.91	gold quality
stromal cell of endometrium	CL:0002255	62.39	gold quality
vagina	UBERON:0000996	60.23	gold quality
esophagus mucosa	UBERON:0002469	59.80	gold quality
ectocervix	UBERON:0012249	59.60	gold quality
lower esophagus mucosa	UBERON:0035834	59.29	gold quality
gall bladder	UBERON:0002110	58.96	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	58.14	gold quality
monocyte	CL:0000576	54.73	gold quality
esophagus	UBERON:0001043	54.71	gold quality
endometrium	UBERON:0001295	54.27	gold quality
skin of abdomen	UBERON:0001416	53.56	gold quality
biceps brachii	UBERON:0001507	53.05	gold quality
hindlimb stylopod muscle	UBERON:0004252	53.05	silver quality
right lung	UBERON:0002167	53.04	gold quality
skin of leg	UBERON:0001511	52.00	gold quality
prefrontal cortex	UBERON:0000451	51.91	gold quality
sperm	CL:0000019	51.65	gold quality
uterine cervix	UBERON:0000002	51.41	gold quality
zone of skin	UBERON:0000014	51.24	gold quality
minor salivary gland	UBERON:0001830	51.10	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.42

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.