CT70

Summary

CT70 (cancer/testis associated transcript 70, HGNC:37195) is a long non-coding RNA gene on chromosome 9q31.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:37195
Approved symbol	CT70
Name	cancer/testis associated transcript 70
Location	9q31.1
Locus type	RNA, long non-coding
Status	Approved
Aliases	LeXis
Ensembl gene	ENSG00000230013
Ensembl biotype	lncRNA
Entrez	107987106
RNAcentral	URS00026A1C47 — lncRNA, 896 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 10 — 10 lncRNA

ENST00000457720, ENST00000654661, ENST00000658693, ENST00000659359, ENST00000661986, ENST00000665890, ENST00000665997, ENST00000670487, ENST00000783592, ENST00000783593

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000457720 — 2 exons

Exon	Start	End
ENSE00001660052	104991684	104991781
ENSE00001727188	104990796	104991303

Expression profiles

Bgee: expression breadth ubiquitous, 114 present calls, max score 88.52.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.4795 / max 43.3042, expressed in 169 samples.

FANTOM5 promoters (6 alternative TSS)

Promoter ID	TPM avg	Samples expressed
101808	0.1943	85
101812	0.1272	32
101810	0.0560	25
101813	0.0372	10
101809	0.0365	14
101811	0.0283	7

Top tissues by expression

114 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
left testis	UBERON:0004533	88.52	gold quality
testis	UBERON:0000473	87.32	gold quality
right testis	UBERON:0004534	86.97	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	78.41	gold quality
bone marrow cell	CL:0002092	69.83	silver quality
ganglionic eminence	UBERON:0004023	61.97	gold quality
bone marrow	UBERON:0002371	59.55	gold quality
cortical plate	UBERON:0005343	58.61	gold quality
sural nerve	UBERON:0015488	58.27	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	56.14	gold quality
monocyte	CL:0000576	55.81	gold quality
blood	UBERON:0000178	55.36	gold quality
duodenum	UBERON:0002114	53.50	gold quality
stromal cell of endometrium	CL:0002255	52.74	silver quality
islet of Langerhans	UBERON:0000006	51.60	gold quality
prefrontal cortex	UBERON:0000451	51.57	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	51.42	gold quality
calcaneal tendon	UBERON:0003701	49.54	silver quality
muscle of leg	UBERON:0001383	49.31	gold quality
urinary bladder	UBERON:0001255	49.15	gold quality
gastrocnemius	UBERON:0001388	48.90	gold quality
right adrenal gland cortex	UBERON:0035827	48.59	gold quality
vermiform appendix	UBERON:0001154	48.23	gold quality
multicellular organism	UBERON:0000468	48.09	gold quality
right adrenal gland	UBERON:0001233	47.57	gold quality
gall bladder	UBERON:0002110	47.32	gold quality
adrenal gland	UBERON:0002369	47.32	gold quality
placenta	UBERON:0001987	47.30	gold quality
liver	UBERON:0002107	47.15	silver quality
lymph node	UBERON:0000029	47.01	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.29

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.