CTDSPL2-DT

Summary

CTDSPL2-DT (CTDSPL2 divergent transcript, HGNC:55415) is a long non-coding RNA gene on chromosome 15q15.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55415
Approved symbol	CTDSPL2-DT
Name	CTDSPL2 divergent transcript
Location	15q15.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000259595
Ensembl biotype	lncRNA
Entrez	120017340
RNAcentral	URS00000102C8 — lncRNA, 625 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000558047

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000558047 — 5 exons

Exon	Start	End
ENSE00002538529	44414210	44414361
ENSE00002540895	44413334	44413439
ENSE00002542413	44427109	44427144
ENSE00002544416	44405327	44405402
ENSE00002551567	44402685	44402939

Expression profiles

Bgee: expression breadth ubiquitous, 127 present calls, max score 73.01.

Top tissues by expression

127 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow cell	CL:0002092	73.01	silver quality
ganglionic eminence	UBERON:0004023	68.76	gold quality
adrenal tissue	UBERON:0018303	67.78	gold quality
skeletal muscle tissue	UBERON:0001134	66.57	gold quality
cortical plate	UBERON:0005343	66.31	gold quality
endometrium	UBERON:0001295	65.31	gold quality
sural nerve	UBERON:0015488	64.33	silver quality
stromal cell of endometrium	CL:0002255	63.98	gold quality
cerebellar cortex	UBERON:0002129	63.10	gold quality
cerebellum	UBERON:0002037	63.06	gold quality
superior frontal gyrus	UBERON:0002661	63.00	gold quality
cerebellar hemisphere	UBERON:0002245	62.84	gold quality
right hemisphere of cerebellum	UBERON:0014890	62.59	gold quality
monocyte	CL:0000576	62.40	gold quality
primary visual cortex	UBERON:0002436	61.85	gold quality
hindlimb stylopod muscle	UBERON:0004252	61.53	gold quality
bone marrow	UBERON:0002371	60.67	gold quality
lymph node	UBERON:0000029	60.49	gold quality
duodenum	UBERON:0002114	60.15	gold quality
right coronary artery	UBERON:0001625	59.81	gold quality
prefrontal cortex	UBERON:0000451	59.38	gold quality
tibial artery	UBERON:0007610	57.89	gold quality
popliteal artery	UBERON:0002250	57.77	gold quality
smooth muscle tissue	UBERON:0001135	57.19	gold quality
descending thoracic aorta	UBERON:0002345	57.01	gold quality
tonsil	UBERON:0002372	57.01	gold quality
mucosa of transverse colon	UBERON:0004991	56.92	gold quality
mucosa of stomach	UBERON:0001199	56.76	gold quality
urinary bladder	UBERON:0001255	56.30	gold quality
Brodmann (1909) area 9	UBERON:0013540	56.18	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.73

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.