CTIF-AS1

Summary

CTIF-AS1 (CTIF antisense RNA 1, HGNC:58323) is a long non-coding RNA gene on chromosome 18q21.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58323
Approved symbol	CTIF-AS1
Name	CTIF antisense RNA 1
Location	18q21.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000267764
Ensembl biotype	lncRNA
Entrez	105372105
RNAcentral	URS00005A020C — lncRNA, 877 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000590649, ENST00000776736, ENST00000776737

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000590649 — 2 exons

Exon	Start	End
ENSE00002859370	48834692	48834770
ENSE00002949177	48826051	48826848

Expression profiles

Bgee: expression breadth ubiquitous, 119 present calls, max score 92.69.

Top tissues by expression

119 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	92.69	gold quality
colonic epithelium	UBERON:0000397	70.44	gold quality
bone marrow cell	CL:0002092	64.57	silver quality
skeletal muscle tissue	UBERON:0001134	63.12	silver quality
hindlimb stylopod muscle	UBERON:0004252	62.55	gold quality
urinary bladder	UBERON:0001255	61.28	gold quality
bone marrow	UBERON:0002371	59.37	gold quality
right uterine tube	UBERON:0001302	59.20	gold quality
fallopian tube	UBERON:0003889	59.19	gold quality
granulocyte	CL:0000094	58.28	gold quality
liver	UBERON:0002107	57.72	silver quality
adrenal tissue	UBERON:0018303	55.50	gold quality
right atrium auricular region	UBERON:0006631	53.83	gold quality
vermiform appendix	UBERON:0001154	53.82	gold quality
blood	UBERON:0000178	53.74	gold quality
right coronary artery	UBERON:0001625	53.52	gold quality
tonsil	UBERON:0002372	52.82	silver quality
monocyte	CL:0000576	52.61	gold quality
uterine cervix	UBERON:0000002	52.19	silver quality
heart	UBERON:0000948	52.05	gold quality
heart left ventricle	UBERON:0002084	51.88	gold quality
right lung	UBERON:0002167	51.77	gold quality
corpus callosum	UBERON:0002336	51.44	gold quality
right adrenal gland cortex	UBERON:0035827	51.43	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	51.16	gold quality
lung	UBERON:0002048	50.78	gold quality
kidney	UBERON:0002113	50.35	gold quality
smooth muscle tissue	UBERON:0001135	49.80	gold quality
adult mammalian kidney	UBERON:0000082	49.79	gold quality
placenta	UBERON:0001987	49.75	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.49

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.