CTNNBIP1-AS1

Summary

CTNNBIP1-AS1 (CTNNBIP1 antisense RNA 1, HGNC:40782) is a long non-coding RNA gene on chromosome 1p36.22.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40782
Approved symbol	CTNNBIP1-AS1
Name	CTNNBIP1 antisense RNA 1
Location	1p36.22
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000223989
Ensembl biotype	lncRNA
Entrez	139355239
RNAcentral	URS000031D7F4 — lncRNA, 424 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000454104

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000454104 — 3 exons

Exon	Start	End
ENSE00001609258	9849986	9850154
ENSE00001691747	9848318	9848466
ENSE00001779093	9849369	9849474

Expression profiles

Bgee: expression breadth broad, 92 present calls, max score 97.00.

Top tissues by expression

99 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
dorsal plus ventral thalamus	UBERON:0001897	97.00	gold quality
placenta	UBERON:0001987	96.98	gold quality
trachea	UBERON:0003126	96.80	gold quality
corpus callosum	UBERON:0002336	95.81	gold quality
dorsal root ganglion	UBERON:0000044	92.06	gold quality
frontal pole	UBERON:0002795	87.53	gold quality
paraflocculus	UBERON:0005351	85.63	gold quality
middle frontal gyrus	UBERON:0002702	85.11	silver quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.94	gold quality
cortical plate	UBERON:0005343	78.37	gold quality
thymus	UBERON:0002370	76.42	gold quality
ventricular zone	UBERON:0003053	75.87	gold quality
bone marrow cell	CL:0002092	75.35	gold quality
adult mammalian kidney	UBERON:0000082	75.25	gold quality
pancreas	UBERON:0001264	74.83	gold quality
liver	UBERON:0002107	73.79	gold quality
tonsil	UBERON:0002372	72.16	gold quality
ovary	UBERON:0000992	71.66	gold quality
endometrium epithelium	UBERON:0004811	71.19	silver quality
colonic epithelium	UBERON:0000397	70.83	gold quality
epithelium of bronchus	UBERON:0002031	70.77	silver quality
kidney	UBERON:0002113	70.69	gold quality
layer of synovial tissue	UBERON:0007616	70.24	gold quality
metanephric glomerulus	UBERON:0004736	69.43	gold quality
bone marrow	UBERON:0002371	69.01	silver quality
urinary bladder	UBERON:0001255	68.72	gold quality
skeletal muscle tissue	UBERON:0001134	67.00	silver quality
adrenal gland	UBERON:0002369	65.84	gold quality
blood	UBERON:0000178	65.36	gold quality
stomach	UBERON:0000945	64.23	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.00

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.