CTNND2-AS1

Summary

CTNND2-AS1 (CTNND2 antisense RNA 1, HGNC:59002) is a long non-coding RNA gene on chromosome 5p15.2.

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:59002
Approved symbol	CTNND2-AS1
Name	CTNND2 antisense RNA 1
Location	5p15.2
Locus type	RNA, long non-coding
Status	Approved
Entrez	105374654

Gene structure

Transcript identifiers

Ensembl transcripts: 0

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

None — 0 exons

Expression profiles

Top tissues by expression

0 total, by Bgee expression score (0-100, higher = more expressed):

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Protein identifiers

Canonical reviewed UniProt: None (reviewed: )

All UniProt accessions (0):

RefSeq proteins (0): (*=MANE)

Domains & families (InterPro)

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

Function

Pathways and Gene Ontology

Reactome pathways

0 pathways

MSigDB gene sets: 0 (showing top):

GO Biological Process (0):

GO Molecular Function (0):

GO Cellular Component (0):

Protein interactions and networks

STRING

0 interactions, top by confidence (×1000):

IntAct

0 interactions, top by confidence:

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

0 variants total. Per-class counts are floors (≥ shown; pagination cap):

Classification	Count (floor)
Pathogenic	0
Likely pathogenic	0
Uncertain significance	0
Likely benign	0
Benign	0

Top pathogenic / likely-pathogenic (0)

SpliceAI

0 predictions. Top by Δscore:

AlphaMissense

0 scored. Top likely-pathogenic:

dbSNP variants (sampled 300 via entrez): RS1000045669 (5:10976413 G>C), RS1000408287 (5:10963335 C>A), RS1000495479 (5:10968445 C>G,T), RS1000570410 (5:10968103 T>A,C), RS1000818589 (5:10981653 G>A), RS1000841079 (5:10963021 A>G), RS1000935971 (5:10986112 G>A,C), RS1001125809 (5:10975045 T>C), RS1001198175 (5:10980790 T>A,C), RS1001271685 (5:10980544 G>T), RS1001304569 (5:10980084 G>A), RS1001358472 (5:10987717 C>A,T), RS1001460313 (5:10986820 C>A), RS1001476603 (5:10974330 A>G,T), RS1001676774 (5:10980864 T>C)

Disease associations

OMIM: gene `` | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

0 associations (top):

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 0 entries

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.