CTNS-AS1

Summary

CTNS-AS1 (CTNS antisense RNA 1, HGNC:56090) is a long non-coding RNA gene on chromosome 17p13.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56090
Approved symbol	CTNS-AS1
Name	CTNS antisense RNA 1
Location	17p13.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000262903
Ensembl biotype	lncRNA
Entrez	105371492
RNAcentral	URS000007A3D4 — lncRNA, 874 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000575741

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000575741 — 3 exons

Exon	Start	End
ENSE00002641482	3656856	3656921
ENSE00002676378	3657627	3658092
ENSE00002683291	3655621	3655962

Expression profiles

Bgee: expression breadth ubiquitous, 131 present calls, max score 97.72.

Top tissues by expression

131 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	97.72	gold quality
right uterine tube	UBERON:0001302	84.66	gold quality
right adrenal gland cortex	UBERON:0035827	83.66	gold quality
right adrenal gland	UBERON:0001233	83.24	gold quality
left adrenal gland cortex	UBERON:0035825	82.58	gold quality
left adrenal gland	UBERON:0001234	82.21	gold quality
adrenal gland	UBERON:0002369	80.35	gold quality
sural nerve	UBERON:0015488	80.31	gold quality
lower esophagus mucosa	UBERON:0035834	79.65	gold quality
body of stomach	UBERON:0001161	78.98	gold quality
stromal cell of endometrium	CL:0002255	78.93	gold quality
apex of heart	UBERON:0002098	78.59	gold quality
mucosa of transverse colon	UBERON:0004991	78.30	gold quality
endocervix	UBERON:0000458	78.20	gold quality
tibial nerve	UBERON:0001323	78.09	gold quality
heart left ventricle	UBERON:0002084	77.84	gold quality
prostate gland	UBERON:0002367	77.53	gold quality
fundus of stomach	UBERON:0001160	77.48	gold quality
vagina	UBERON:0000996	77.46	gold quality
left lobe of thyroid gland	UBERON:0001120	77.24	gold quality
esophagus mucosa	UBERON:0002469	77.05	gold quality
right lobe of thyroid gland	UBERON:0001119	76.96	gold quality
right coronary artery	UBERON:0001625	76.82	gold quality
thyroid gland	UBERON:0002046	76.64	gold quality
ascending aorta	UBERON:0001496	76.63	gold quality
ectocervix	UBERON:0012249	76.61	gold quality
thoracic aorta	UBERON:0001515	76.50	gold quality
right ovary	UBERON:0002118	76.40	gold quality
metanephros cortex	UBERON:0010533	76.29	gold quality
stomach	UBERON:0000945	76.27	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.31

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.