CYDAER

Summary

CYDAER (cytoplasmic differentiation associated epidermal RNA, HGNC:40594) is a long non-coding RNA gene on chromosome 1q42.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40594
Approved symbol	CYDAER
Name	cytoplasmic differentiation associated epidermal RNA
Location	1q42.2
Locus type	RNA, long non-coding
Status	Approved
Aliases	RP11-295G20.2
Ensembl gene	ENSG00000233461
Ensembl biotype	lncRNA
Entrez	122526782

Gene structure

Transcript identifiers

Ensembl transcripts: 13 — 13 lncRNA

ENST00000416221, ENST00000425412, ENST00000440665, ENST00000450783, ENST00000454631, ENST00000654602, ENST00000658645, ENST00000659999, ENST00000661659, ENST00000662999, ENST00000666601, ENST00000667843, ENST00000668147

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000416221 — 2 exons

Exon	Start	End
ENSE00001594319	231528420	231528517
ENSE00001643579	231522456	231522637

Expression profiles

Bgee: expression breadth ubiquitous, 201 present calls, max score 93.52.

Top tissues by expression

237 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
skin of abdomen	UBERON:0001416	93.52	gold quality
skin of leg	UBERON:0001511	92.74	gold quality
left testis	UBERON:0004533	92.13	gold quality
zone of skin	UBERON:0000014	91.88	gold quality
right testis	UBERON:0004534	91.82	gold quality
oocyte	CL:0000023	90.38	gold quality
testis	UBERON:0000473	89.90	gold quality
sperm	CL:0000019	89.56	gold quality
mucosa of transverse colon	UBERON:0004991	89.12	gold quality
lower esophagus mucosa	UBERON:0035834	88.98	gold quality
blood	UBERON:0000178	87.34	gold quality
tibialis anterior	UBERON:0001385	86.88	silver quality
adrenal tissue	UBERON:0018303	86.86	gold quality
mammalian vulva	UBERON:0000997	86.79	gold quality
right adrenal gland	UBERON:0001233	86.70	gold quality
penis	UBERON:0000989	86.46	gold quality
hindlimb stylopod muscle	UBERON:0004252	85.93	gold quality
esophagus mucosa	UBERON:0002469	85.36	gold quality
ileal mucosa	UBERON:0000331	85.25	silver quality
left adrenal gland	UBERON:0001234	84.89	gold quality
left adrenal gland cortex	UBERON:0035825	84.42	gold quality
right lobe of liver	UBERON:0001114	84.34	gold quality
upper arm skin	UBERON:0004263	84.34	silver quality
granulocyte	CL:0000094	84.14	gold quality
gastrocnemius	UBERON:0001388	84.14	gold quality
colonic epithelium	UBERON:0000397	83.69	gold quality
adrenal gland	UBERON:0002369	83.67	gold quality
right adrenal gland cortex	UBERON:0035827	83.35	gold quality
upper leg skin	UBERON:0004262	83.15	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.07	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.79

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.