DAPK1-IT1

Summary

DAPK1-IT1 (DAPK1 intronic transcript 1, HGNC:43591) is a long non-coding RNA gene on chromosome 9q21.33.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:43591
Approved symbol	DAPK1-IT1
Name	DAPK1 intronic transcript 1
Location	9q21.33
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000236709
Ensembl biotype	lncRNA
Entrez	100506897
RNAcentral	URS000054293B — lncRNA, 702 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000431813

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000431813 — 2 exons

Exon	Start	End
ENSE00001440977	87553454	87553590
ENSE00001793193	87553895	87554459

Expression profiles

Bgee: expression breadth ubiquitous, 156 present calls, max score 94.22.

Top tissues by expression

205 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
pancreatic ductal cell	CL:0002079	94.22	gold quality
corpus epididymis	UBERON:0004359	87.43	gold quality
cauda epididymis	UBERON:0004360	86.46	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.35	gold quality
visceral pleura	UBERON:0002401	81.15	gold quality
caput epididymis	UBERON:0004358	80.79	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	80.11	silver quality
parietal pleura	UBERON:0002400	79.27	gold quality
thymus	UBERON:0002370	77.88	gold quality
colonic epithelium	UBERON:0000397	77.40	gold quality
placenta	UBERON:0001987	76.29	gold quality
renal medulla	UBERON:0000362	76.04	gold quality
bone marrow cell	CL:0002092	74.75	gold quality
kidney epithelium	UBERON:0004819	74.10	gold quality
germinal epithelium of ovary	UBERON:0001304	74.06	gold quality
jejunal mucosa	UBERON:0000399	73.18	gold quality
lower lobe of lung	UBERON:0008949	72.80	gold quality
sural nerve	UBERON:0015488	71.76	silver quality
pylorus	UBERON:0001166	71.39	gold quality
trabecular bone tissue	UBERON:0002483	70.45	gold quality
oviduct epithelium	UBERON:0004804	68.61	gold quality
urinary bladder	UBERON:0001255	66.52	gold quality
skin of hip	UBERON:0001554	66.47	gold quality
palpebral conjunctiva	UBERON:0001812	64.90	gold quality
lung	UBERON:0002048	64.80	gold quality
primary visual cortex	UBERON:0002436	64.37	gold quality
liver	UBERON:0002107	64.20	gold quality
adult organism	UBERON:0007023	63.16	gold quality
monocyte	CL:0000576	62.48	gold quality
mucosa of paranasal sinus	UBERON:0005030	62.23	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.44

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.