DCXR-DT

Summary

DCXR-DT (DCXR divergent transcript, HGNC:54083) is a long non-coding RNA gene on chromosome 17q25.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54083
Approved symbol	DCXR-DT
Name	DCXR divergent transcript
Location	17q25.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	RP13-650J16.1
Ensembl gene	ENSG00000264569
Ensembl biotype	lncRNA
Entrez	113523640
RNAcentral	URS0000E60A8F — lncRNA, 696 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000582558, ENST00000584705, ENST00000848409

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000582558 — 2 exons

Exon	Start	End
ENSE00002718113	82039181	82039380
ENSE00004277851	82037842	82038268

Expression profiles

Bgee: expression breadth ubiquitous, 124 present calls, max score 87.51.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0845 / max 25.0367, expressed in 21 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
163457	0.0845	21

Top tissues by expression

124 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	87.51	gold quality
right lobe of liver	UBERON:0001114	82.29	gold quality
liver	UBERON:0002107	79.41	gold quality
ganglionic eminence	UBERON:0004023	70.42	gold quality
substantia nigra	UBERON:0002038	69.23	gold quality
stromal cell of endometrium	CL:0002255	67.63	gold quality
amygdala	UBERON:0001876	67.23	gold quality
temporal lobe	UBERON:0001871	67.05	gold quality
ventricular zone	UBERON:0003053	66.68	gold quality
putamen	UBERON:0001874	66.67	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	66.15	gold quality
prefrontal cortex	UBERON:0000451	66.14	gold quality
hypothalamus	UBERON:0001898	65.99	gold quality
Ammon’s horn	UBERON:0001954	64.92	gold quality
caudate nucleus	UBERON:0001873	64.19	gold quality
frontal cortex	UBERON:0001870	64.10	gold quality
apex of heart	UBERON:0002098	63.98	gold quality
nucleus accumbens	UBERON:0001882	63.80	gold quality
cerebral cortex	UBERON:0000956	63.77	gold quality
anterior cingulate cortex	UBERON:0009835	63.70	gold quality
hindlimb stylopod muscle	UBERON:0004252	63.13	gold quality
skeletal muscle tissue	UBERON:0001134	62.92	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	62.82	gold quality
Brodmann (1909) area 9	UBERON:0013540	62.58	gold quality
brain	UBERON:0000955	62.49	gold quality
gastrocnemius	UBERON:0001388	62.36	gold quality
muscle of leg	UBERON:0001383	62.29	gold quality
adult mammalian kidney	UBERON:0000082	62.03	gold quality
heart left ventricle	UBERON:0002084	62.03	gold quality
right frontal lobe	UBERON:0002810	61.78	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.33

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.