DDX19A-DT

Summary

DDX19A-DT (DDX19A divergent transcript, HGNC:55349) is a long non-coding RNA gene on chromosome 16q22.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55349
Approved symbol	DDX19A-DT
Name	DDX19A divergent transcript
Location	16q22.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000261777
Ensembl biotype	lncRNA
Entrez	100506083
RNAcentral	URS000075AE5D — lncRNA, 1484 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 4 lncRNA, 1 retained_intron

ENST00000562077, ENST00000570278, ENST00000666089, ENST00000729055, ENST00000729056

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000562077 — 5 exons

Exon	Start	End
ENSE00002576514	70346199	70346747
ENSE00002583169	70317256	70317373
ENSE00002585429	70341940	70342099
ENSE00002588428	70315640	70316142
ENSE00002625404	70333820	70333960

Expression profiles

Bgee: expression breadth ubiquitous, 164 present calls, max score 79.97.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 2.3467 / max 54.2742, expressed in 1060 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
157930	1.9609	938
157931	0.3858	220

Top tissues by expression

244 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	79.97	gold quality
buccal mucosa cell	CL:0002336	71.92	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	70.44	gold quality
ventricular zone	UBERON:0003053	66.72	gold quality
ganglionic eminence	UBERON:0004023	66.68	gold quality
bone marrow cell	CL:0002092	66.38	silver quality
colonic epithelium	UBERON:0000397	65.89	silver quality
cortical plate	UBERON:0005343	65.04	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	64.28	gold quality
islet of Langerhans	UBERON:0000006	64.12	gold quality
cerebellar hemisphere	UBERON:0002245	63.38	gold quality
gastrocnemius	UBERON:0001388	63.35	gold quality
muscle of leg	UBERON:0001383	63.32	gold quality
cerebellar cortex	UBERON:0002129	63.29	gold quality
hindlimb stylopod muscle	UBERON:0004252	62.87	gold quality
left ovary	UBERON:0002119	62.73	gold quality
right hemisphere of cerebellum	UBERON:0014890	62.46	gold quality
spinal cord	UBERON:0002240	62.09	gold quality
sural nerve	UBERON:0015488	62.02	silver quality
right ovary	UBERON:0002118	61.92	gold quality
Brodmann (1909) area 9	UBERON:0013540	61.75	gold quality
cerebellum	UBERON:0002037	61.64	gold quality
apex of heart	UBERON:0002098	61.58	gold quality
ovary	UBERON:0000992	61.45	gold quality
stromal cell of endometrium	CL:0002255	61.41	gold quality
tibial nerve	UBERON:0001323	59.75	gold quality
right adrenal gland	UBERON:0001233	59.71	gold quality
right lobe of liver	UBERON:0001114	59.57	gold quality
heart left ventricle	UBERON:0002084	59.57	gold quality
granulocyte	CL:0000094	59.34	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.13

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.