DDX3ILA1

Summary

DDX3ILA1 (DDX3 interacting lncRNA 1, HGNC:55358) is a long non-coding RNA gene on chromosome 7q21.11.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55358
Approved symbol	DDX3ILA1
Name	DDX3 interacting lncRNA 1
Location	7q21.11
Locus type	RNA, long non-coding
Status	Approved
Aliases	TCONS_00012883
Ensembl gene	ENSG00000232756
Ensembl biotype	lncRNA
Entrez	105375368
RNAcentral	URS00026A2697 — lncRNA, 1782 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000431722, ENST00000438324, ENST00000454234

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000431722 — 3 exons

Exon	Start	End
ENSE00001615652	77990384	77990677
ENSE00001677709	77994872	77994942
ENSE00001773771	77990984	77991182

Expression profiles

Bgee: expression breadth ubiquitous, 107 present calls, max score 88.52.

Top tissues by expression

107 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
olfactory segment of nasal mucosa	UBERON:0005386	88.52	gold quality
gall bladder	UBERON:0002110	76.74	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	75.55	silver quality
rectum	UBERON:0001052	73.15	gold quality
vagina	UBERON:0000996	69.29	gold quality
lower esophagus mucosa	UBERON:0035834	68.59	gold quality
esophagus mucosa	UBERON:0002469	67.37	gold quality
right uterine tube	UBERON:0001302	67.01	gold quality
tonsil	UBERON:0002372	65.67	gold quality
esophagus	UBERON:0001043	65.27	gold quality
transverse colon	UBERON:0001157	65.03	gold quality
fallopian tube	UBERON:0003889	64.71	gold quality
liver	UBERON:0002107	62.19	gold quality
duodenum	UBERON:0002114	61.95	gold quality
colon	UBERON:0001155	61.61	gold quality
mucosa of transverse colon	UBERON:0004991	61.05	gold quality
right lung	UBERON:0002167	60.97	gold quality
intestine	UBERON:0000160	59.76	gold quality
ventricular zone	UBERON:0003053	58.03	silver quality
saliva-secreting gland	UBERON:0001044	58.02	gold quality
minor salivary gland	UBERON:0001830	57.94	gold quality
uterine cervix	UBERON:0000002	57.55	gold quality
vermiform appendix	UBERON:0001154	57.44	gold quality
muscle tissue	UBERON:0002385	57.10	gold quality
islet of Langerhans	UBERON:0000006	55.25	gold quality
small intestine	UBERON:0002108	55.10	gold quality
ectocervix	UBERON:0012249	54.50	gold quality
small intestine Peyer’s patch	UBERON:0003454	54.36	gold quality
smooth muscle tissue	UBERON:0001135	54.21	gold quality
primary visual cortex	UBERON:0002436	53.63	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.68

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.