DEPDC1B-DT

Summary

DEPDC1B-DT (DEPDC1B divergent transcript, HGNC:59058) is a long non-coding RNA gene on chromosome 5q12.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:59058
Approved symbol	DEPDC1B-DT
Name	DEPDC1B divergent transcript
Location	5q12.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000287434
Ensembl biotype	lncRNA
Entrez	124900982

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000664253

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000664253 — 2 exons

Exon	Start	End
ENSE00004100539	60699729	60700341
ENSE00004100540	60701654	60702087

Expression profiles

Bgee: expression breadth ubiquitous, 120 present calls, max score 66.22.

Top tissues by expression

120 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	66.22	gold quality
sural nerve	UBERON:0015488	61.72	gold quality
bone marrow	UBERON:0002371	60.34	gold quality
hindlimb stylopod muscle	UBERON:0004252	60.16	gold quality
corpus callosum	UBERON:0002336	59.32	gold quality
skeletal muscle tissue	UBERON:0001134	57.53	silver quality
primary visual cortex	UBERON:0002436	55.74	gold quality
blood	UBERON:0000178	55.00	gold quality
leukocyte	CL:0000738	53.65	silver quality
monocyte	CL:0000576	53.60	silver quality
cerebellar cortex	UBERON:0002129	53.52	gold quality
cerebellum	UBERON:0002037	53.49	gold quality
cerebellar hemisphere	UBERON:0002245	53.38	gold quality
calcaneal tendon	UBERON:0003701	52.90	silver quality
granulocyte	CL:0000094	52.58	gold quality
superior frontal gyrus	UBERON:0002661	52.43	gold quality
lymph node	UBERON:0000029	52.22	gold quality
prefrontal cortex	UBERON:0000451	52.13	gold quality
liver	UBERON:0002107	51.26	silver quality
right hemisphere of cerebellum	UBERON:0014890	51.22	gold quality
islet of Langerhans	UBERON:0000006	51.15	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	50.87	gold quality
adrenal tissue	UBERON:0018303	50.39	gold quality
vermiform appendix	UBERON:0001154	50.19	gold quality
right lobe of liver	UBERON:0001114	50.03	silver quality
rectum	UBERON:0001052	49.78	gold quality
nucleus accumbens	UBERON:0001882	49.68	gold quality
Brodmann (1909) area 9	UBERON:0013540	49.26	gold quality
mucosa of stomach	UBERON:0001199	49.14	gold quality
tibial artery	UBERON:0007610	48.78	gold quality

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.