DHRS4
gene geneOn this page
Also known as SCAD-SRLSDR-SRLhumNRDRFLJ11008SDR25C2
Summary
DHRS4 (dehydrogenase/reductase 4, HGNC:16985) is a protein-coding gene on chromosome 14q11.2, encoding Dehydrogenase/reductase SDR family member 4 (Q9BTZ2). NADPH-dependent oxidoreductase which catalyzes the reduction of a variety of compounds bearing carbonyl groups including ketosteroids, alpha-dicarbonyl compounds, aldehydes, aromatic ketones and quinones.
Enables identical protein binding activity; oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor; and oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor. Involved in several processes, including ketone metabolic process; positive regulation of reactive oxygen species metabolic process; and steroid metabolic process. Located in nucleus and peroxisomal membrane.
Source: NCBI Gene 10901 — RefSeq curated summary.
At a glance
- GWAS associations: 1
- Clinical variants (ClinVar): 91 total
- MANE Select transcript:
NM_021004
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:16985 |
| Approved symbol | DHRS4 |
| Name | dehydrogenase/reductase 4 |
| Location | 14q11.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | SCAD-SRL, SDR-SRL, humNRDR, FLJ11008, SDR25C2 |
| Ensembl gene | ENSG00000157326 |
| Ensembl biotype | protein_coding |
| OMIM | 611596 |
| Entrez | 10901 |
Gene structure
Transcript identifiers
Ensembl transcripts: 14 — 14 protein_coding
ENST00000313250, ENST00000397074, ENST00000397075, ENST00000543741, ENST00000558263, ENST00000558581, ENST00000559632, ENST00000559975, ENST00000875626, ENST00000875627, ENST00000875628, ENST00000875629, ENST00000875630, ENST00000875631
RefSeq mRNA: 7 — MANE Select: NM_021004
NM_001282987, NM_001282988, NM_001282989, NM_001282990, NM_001282991, NM_001411004, NM_021004
CCDS: CCDS61408, CCDS61409, CCDS61410, CCDS61411, CCDS61412, CCDS91852, CCDS9605
Canonical transcript exons
ENST00000313250 — 8 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001527204 | 23953770 | 23953916 |
| ENSE00001627632 | 23959902 | 23960003 |
| ENSE00001676573 | 23955035 | 23955212 |
| ENSE00001679388 | 23966283 | 23966417 |
| ENSE00001713910 | 23965762 | 23965832 |
| ENSE00002563434 | 23968757 | 23969279 |
| ENSE00003508721 | 23965932 | 23965983 |
| ENSE00003643850 | 23967211 | 23967266 |
Expression profiles
Bgee: expression breadth ubiquitous, 140 present calls, max score 96.06.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 28.5209 / max 144.7872, expressed in 1809 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 138958 | 28.5209 | 1809 |
| 138962 | 0.6104 | 262 |
Top tissues by expression
140 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right lobe of liver | UBERON:0001114 | 96.06 | gold quality |
| adult mammalian kidney | UBERON:0000082 | 95.73 | gold quality |
| duodenum | UBERON:0002114 | 95.48 | gold quality |
| liver | UBERON:0002107 | 95.10 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 95.00 | gold quality |
| monocyte | CL:0000576 | 94.82 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 94.81 | gold quality |
| leukocyte | CL:0000738 | 94.45 | gold quality |
| apex of heart | UBERON:0002098 | 93.33 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 93.06 | gold quality |
| heart left ventricle | UBERON:0002084 | 92.98 | gold quality |
| gastrocnemius | UBERON:0001388 | 92.95 | gold quality |
| kidney | UBERON:0002113 | 92.82 | gold quality |
| left adrenal gland | UBERON:0001234 | 92.77 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 92.75 | gold quality |
| muscle of leg | UBERON:0001383 | 92.69 | gold quality |
| skeletal muscle organ | UBERON:0014892 | 92.61 | gold quality |
| transverse colon | UBERON:0001157 | 92.52 | gold quality |
| right adrenal gland | UBERON:0001233 | 92.34 | gold quality |
| lower esophagus | UBERON:0013473 | 92.30 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 92.28 | gold quality |
| cortex of kidney | UBERON:0001225 | 92.12 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 91.99 | gold quality |
| esophagus | UBERON:0001043 | 91.81 | gold quality |
| small intestine | UBERON:0002108 | 91.72 | gold quality |
| esophagus mucosa | UBERON:0002469 | 91.72 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 91.68 | gold quality |
| colon | UBERON:0001155 | 91.60 | gold quality |
| skin of leg | UBERON:0001511 | 91.53 | gold quality |
| skin of abdomen | UBERON:0001416 | 91.52 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 9.70 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
14 targeting DHRS4, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6748-5P | 100.00 | 65.81 | 1057 |
| HSA-MIR-513A-5P | 100.00 | 69.77 | 2465 |
| HSA-MIR-450B-5P | 99.92 | 71.48 | 3175 |
| HSA-MIR-2053 | 99.57 | 69.15 | 1635 |
| HSA-MIR-4753-5P | 99.54 | 68.51 | 1356 |
| HSA-MIR-20A-3P | 99.44 | 69.10 | 1575 |
| HSA-MIR-3922-3P | 99.25 | 64.96 | 1136 |
| HSA-MIR-3176 | 99.25 | 64.35 | 954 |
| HSA-MIR-7854-3P | 99.08 | 66.26 | 1117 |
| HSA-MIR-29A-5P | 99.08 | 68.59 | 1813 |
| HSA-MIR-922 | 99.02 | 67.23 | 1838 |
| HSA-MIR-2355-5P | 98.83 | 65.51 | 1589 |
| HSA-MIR-500A-3P | 97.60 | 67.48 | 595 |
| HSA-MIR-6869-3P | 83.17 | 65.88 | 30 |
Literature-anchored findings (GeneRIF, showing 11)
- Alternatively spliced variant of NADP(H)-dependent retinol dehydrogenase/reductase with deletion of exon 3 is associated with cervical squamous carcinoma (PMID:17230527)
- Results suggest a novel mechanism of cold inactivation and role of the inducible human DHRS4 in 3beta-hydroxysteroid synthesis and xenobiotic carbonyl metabolism (PMID:18571493)
- Novel alternative splicing variants, transcribed from an alternative transcrioption start sites within the DHRS4 gene cluster were identified in this study. (PMID:18754758)
- Analysis of exon composition in the transcripts of DHRS4 gene cluster revealed that exon 1 was absent in all the transcripts initiated from exon a1 of DHRS4L2 and exon a2 of DHRS4L1. (PMID:20525226)
- This study demonstrates that AS1DHRS4, as a long noncoding RNA, simultaneously controls the chromatin state of each gene within the DHRS4 gene cluster in a discriminative manner. (PMID:22891334)
- A rapid evolution rate brought the human DHRS2 gene, duplicated form of the DHRS4 one, to code a SDR enzyme having subcellular localization, synthesis regulation and specialized cellular functions very different from those of the human DHRS4 enzyme. (PMID:23036705)
- DHRS2 and DHRS4 genes are syntenic outparalogues originating from a duplication of the DHRS4 gene that took place before the formation of the mammalian clade (PMID:23036705)
- NRDRB1, an alternatively spliced isoform of NRDR in vivo functions better than NRDR as a dicarbonyl reductase for xenobiotics containing reactive carbonyls. (PMID:23128527)
- AS1eRNA-driven DNA looping and activating histone modifications promote the expression of DHRS4-AS1 to economically control the DHRS4 gene cluster. (PMID:26864944)
- An analysis of the relationship between the promoter characteristics and RNA expression of the DHRS4 gene cluster indicated that the development of CpG islands, in addition to the promoter sequence, during mammalian evolution could modulate the dose compensatory regulation of the copy number-varied DHRS4 gene cluster (PMID:27323117)
- LncRNA DHRS4-AS1 ameliorates hepatocellular carcinoma by suppressing proliferation and promoting apoptosis via miR-522-3p/SOCS5 axis. (PMID:34666613)
Cross-species orthologs
25 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | cbr1l | ENSDARG00000021149 |
| danio_rerio | zgc:101858 | ENSDARG00000035129 |
| danio_rerio | zgc:163083 | ENSDARG00000099873 |
| danio_rerio | zgc:92161 | ENSDARG00000101749 |
| danio_rerio | zgc:123284 | ENSDARG00000102720 |
| danio_rerio | zgc:112146 | ENSDARG00000104829 |
| mus_musculus | Dhrs4 | ENSMUSG00000022210 |
| rattus_norvegicus | Dhrs4 | ENSRNOG00000018239 |
| drosophila_melanogaster | CG7601 | FBGN0027583 |
| drosophila_melanogaster | CG12171 | FBGN0037354 |
| drosophila_melanogaster | CG3699 | FBGN0040349 |
| drosophila_melanogaster | CG31546 | FBGN0051546 |
| drosophila_melanogaster | CG31548 | FBGN0051548 |
| drosophila_melanogaster | CG31549 | FBGN0051549 |
| caenorhabditis_elegans | WBGENE00000970 | |
| caenorhabditis_elegans | WBGENE00000975 | |
| caenorhabditis_elegans | WBGENE00000981 | |
| caenorhabditis_elegans | WBGENE00000993 | |
| caenorhabditis_elegans | WBGENE00008985 | |
| caenorhabditis_elegans | WBGENE00008986 | |
| caenorhabditis_elegans | WBGENE00011424 | |
| caenorhabditis_elegans | Y47G6A.21 | WBGENE00021646 |
| caenorhabditis_elegans | Y47G6A.22 | WBGENE00021647 |
| caenorhabditis_elegans | WBGENE00022809 | |
| caenorhabditis_elegans | WBGENE00219274 |
Paralogs (13): RDH8 (ENSG00000080511), DHRS7 (ENSG00000100612), DHRS2 (ENSG00000100867), DHRS7B (ENSG00000109016), HSD11B1 (ENSG00000117594), HSDL2 (ENSG00000119471), DHRS1 (ENSG00000157379), CBR1 (ENSG00000159228), CBR3 (ENSG00000159231), HSD11B1L (ENSG00000167733), DHRS7C (ENSG00000184544), DHRS4L2 (ENSG00000187630), DHRS11 (ENSG00000278535)
Protein
Protein identifiers
Dehydrogenase/reductase SDR family member 4 — Q9BTZ2 (reviewed: Q9BTZ2)
Alternative names: NADPH-dependent carbonyl reductase, NADPH-dependent retinol dehydrogenase/reductase, Peroxisomal short-chain alcohol dehydrogenase, SCAD-SRL, Short chain dehydrogenase/reductase family 25C member 2, Short-chain dehydrogenase/reductase family member 4
All UniProt accessions (3): Q9BTZ2, F5GWZ1, H0YNP7
UniProt curated annotations — full annotation on UniProt →
Function. NADPH-dependent oxidoreductase which catalyzes the reduction of a variety of compounds bearing carbonyl groups including ketosteroids, alpha-dicarbonyl compounds, aldehydes, aromatic ketones and quinones. Reduces 3-ketosteroids and benzil into 3beta-hydroxysteroids and R-benzoin, respectively, in contrast to the stereoselectivity of non-primate DHRS4s which produce 3alpha-hydroxysteroids and S-benzoin. Displays low activity toward all-trans-retinal and no activity toward 9-cis-retinal as compared to non-primate mammals. In the reverse reaction, catalyze the NAD-dependent oxidation of 3beta-hydroxysteroids and alcohol, but with much lower efficiency. Involved in the metabolism of 3beta-hydroxysteroids, isatin and xenobiotic carbonyl compounds. No detected catalytic activity in vitro, possibly due to the lack of catalytic site. NADPH-dependent oxidoreductase which catalyzes the reduction of a variety of compounds bearing carbonyl groups including ketosteroids, alpha-dicarbonyl compounds, aldehydes, aromatic ketones and quinones. Involved in the metabolism of 3beta-hydroxysteroids, isatin and xenobiotic carbonyl compounds. Has a higher catalytic activity for xenobiotic alpha-dicarbonyl compounds, sucha as benzil, than isoform 1 and is involved in benzil detoxification.
Subunit / interactions. Homotetramer.
Subcellular location. Peroxisome Nucleus.
Tissue specificity. Predominantly expressed in normal cervix (at protein level). Expressed in some neoplastic cervical tissues, but not in normal cervix (at protein level). Expressed in a few neoplastic cervical tissues. Expressed in a few neoplastic cervical tissues. High expression in liver.
Activity regulation. Inhibited by flavonoids (quercetin and genistein), cetylpyridium chloride, phenylhexane and valproic acid. Low inhibition is observed with fatty acids (myristic acid and lauric acid). No significant inhibition is observed with barbital, dicumarol, indomethacin, metyrapone, ethacrynic acid, disulfiram, hexestrol and benzodiazepines (diazepam and nitrazepam).
Domain organisation. The C-terminus peroxisomal targeting signal tripeptide is important for peroxisomal import. Once in the peroxisome, it is involved in intersubunit interactions. Three specific residues, Ser-176, Phe-179 and Thr-195 are conserved between primates whereas the respective residues are phenylalanine, leucine, and asparagine in the other mammal enzymes. The two residues at positions 176 and 179 are molecular determinants responsible for the stereoselective reduction of 3-ketosteroids and benzil. The presence of an asparagine at position 195 is important for the maintenance of the quaternary structure and stability at cold temperature. The absence of an asparagine at position 195 destabilizes the quaternary structure, thereby affecting catalytic efficiency toward some substrates and decreasing stability at cold temperature.
Induction. Induced by PPARA ligands clofibrate and Wy14,643.
Miscellaneous. Primate DHRS4s display different stereoselectivity and catalytic efficiency in the oxidoreduction of some substrates as compared to other mammal DHRS4s due to a difference in conserved amino acid residues. Three homologous proteins DHRS4, DHRS4L1, and DHRS4L2 are derived from gene duplication of DHRS4, and the gene cluster is arranged in tandem in chromosome 14.
Similarity. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
Isoforms (8)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q9BTZ2-1 | 1, SDR-SRL3 | yes |
| Q9BTZ2-2 | 2, SDR-SRL1 | |
| Q9BTZ2-3 | 3, SDR-SRL2 | |
| Q9BTZ2-4 | 4, NRDRB1 | |
| Q9BTZ2-5 | 5, NRDRB2 | |
| Q9BTZ2-6 | 6, NRDRA1 | |
| Q9BTZ2-7 | 7, NRDRA2 | |
| Q9BTZ2-8 | 8, NRDRB1 |
RefSeq proteins (7): NP_001269916, NP_001269917, NP_001269918, NP_001269919, NP_001269920, NP_001397933, NP_066284* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR002347 | SDR_fam | Family |
| IPR020904 | Sc_DH/Rdtase_CS | Conserved_site |
| IPR036291 | NAD(P)-bd_dom_sf | Homologous_superfamily |
Pfam: PF13561
Enzyme classification (BRENDA):
- EC 1.1.1.300 — NADP-retinol dehydrogenase (BRENDA: 11 organisms, 101 substrates, 7 inhibitors, 67 Km, 12 kcat entries)
Substrate kinetics (BRENDA)
14 substrates with measured Km, best-characterized 14. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| ALL-TRANS-RETINAL | 0.0001–0.5 | 19 |
| NADPH | 0.0005–0.23 | 10 |
| NADP+ | 0.0004–0.8 | 9 |
| ALL-TRANS-RETINOL | 0.0006–1.3 | 6 |
| NADH | 2.22–1300 | 4 |
| ALL-TRANS-3-HYDROXYRETINAL | 0.0032–0.0044 | 3 |
| ESTRONE | 0.0096–0.0307 | 3 |
| NAD+ | 0.004–680 | 3 |
| 9-CIS-RETINAL | 0.0001–0.19 | 2 |
| RETINAL | 0.007–0.13 | 2 |
| 11-CIS-RETINAL | 0.0001 | 1 |
| 11-CIS-RETINOL | 0.0016 | 1 |
| 13-CIS-RETINAL | 0.62 | 1 |
| 9-CIS-RETINOL | 0.0016 | 1 |
Catalyzed reactions (Rhea), 7 shown:
- a secondary alcohol + NADP(+) = a ketone + NADPH + H(+) (RHEA:19257)
- 3beta-hydroxy-5beta-pregnane-20-one + NADP(+) = 5beta-pregnan-3,20-dione + NADPH + H(+) (RHEA:22944)
- lithocholate + NADP(+) = 3-oxo-5beta-cholan-24-oate + NADPH + H(+) (RHEA:47496)
- 3-oxo-5beta-cholan-24-oate + NADPH + H(+) = isolithocholate + NADP(+) (RHEA:47520)
- isatin + NADPH + H(+) = 3-hydroxyindolin-2-one + NADP(+) (RHEA:68608)
- 5beta-dihydrotestosterone + NADPH + H(+) = 5beta-androstane-3beta,17beta-diol + NADP(+) (RHEA:69012)
- 5beta-androstane-3,17-dione + NADPH + H(+) = 3beta-hydroxy-5beta-androstane-17-one + NADP(+) (RHEA:69036)
UniProt features (57 total): helix 13, modified residue 9, splice variant 8, strand 7, sequence conflict 5, mutagenesis site 3, binding site 3, sequence variant 2, turn 2, site 2, chain 1, short sequence motif 1, active site 1
Structure
Experimental structures (PDB)
1 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 3O4R | X-RAY DIFFRACTION | 1.7 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q9BTZ2-F1 | 91.40 | 0.81 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (3): 182 (proton acceptor); 176 (responsible for the stereoselective reduction of 3-ketosteroids into 3beta-hydroxysteroids and benzil into r-benzoin); 179 (responsible for the stereoselective reduction of 3-ketosteroids into 3beta-hydroxysteroids and benzil into r-benzoin)
Ligand- & substrate-binding residues (3): 36–60; 169; 186
Post-translational modifications (9): 105, 216, 216, 220, 227, 234, 140, 92, 92
Mutagenesis-validated functional residues (3):
| Position | Phenotype |
|---|---|
| 176 | decreased reduction activity for benzil, isatin and retinal and increased activity for 5beta-pregnane-3,20-dione and 5be |
| 179 | decreased reduction activity for isatin and increased activity for 5beta-pregnane-3,20-dione, 5beta-dihydrotestosterone, |
| 195 | loss of cold catalytic inactivation. loss of cold catalytic inactivation; when associated with f-176 and l-179. switch i |
Function
Pathways and Gene Ontology
Reactome pathways
2 pathways
| ID | Pathway |
|---|---|
| R-HSA-5365859 | RA biosynthesis pathway |
| R-HSA-9033241 | Peroxisomal protein import |
MSigDB gene sets: 103 (showing top):
GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN, GOBP_REGULATION_OF_HORMONE_LEVELS, GOBP_RETINOL_METABOLIC_PROCESS, AAAYRNCTG_UNKNOWN, GOBP_KETONE_METABOLIC_PROCESS, GOMF_STEROID_DEHYDROGENASE_ACTIVITY_ACTING_ON_THE_CH_OH_GROUP_OF_DONORS_NAD_OR_NADP_AS_ACCEPTOR, GOBP_REGULATION_OF_REACTIVE_OXYGEN_SPECIES_METABOLIC_PROCESS, GOBP_POSITIVE_REGULATION_OF_REACTIVE_OXYGEN_SPECIES_METABOLIC_PROCESS, OCT1_06, GOBP_RETINAL_METABOLIC_PROCESS, GOBP_LIPID_METABOLIC_PROCESS, GOBP_ALDEHYDE_METABOLIC_PROCESS, GOCC_MICROBODY_MEMBRANE, GOMF_OXIDOREDUCTASE_ACTIVITY_ACTING_ON_NAD_P_H, GOMF_OXIDOREDUCTASE_ACTIVITY_ACTING_ON_CH_OH_GROUP_OF_DONORS
GO Biological Process (6): alcohol metabolic process (GO:0006066), steroid metabolic process (GO:0008202), ketone metabolic process (GO:0042180), retinal metabolic process (GO:0042574), positive regulation of reactive oxygen species metabolic process (GO:2000379), retinol metabolic process (GO:0042572)
GO Molecular Function (8): 3-beta-hydroxysteroid 3-dehydrogenase (NADP+) activity (GO:0000253), carbonyl reductase (NADPH) activity (GO:0004090), oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (GO:0016655), alcohol dehydrogenase [NAD(P)+] activity (GO:0018455), 3-beta-hydroxy-5-beta-steroid dehydrogenase (NADP+) activity (GO:0033703), identical protein binding (GO:0042802), all-trans-retinol dehydrogenase (NADP+) activity (GO:0052650), oxidoreductase activity (GO:0016491)
GO Cellular Component (7): nucleus (GO:0005634), mitochondrion (GO:0005739), peroxisome (GO:0005777), peroxisomal membrane (GO:0005778), peroxisomal matrix (GO:0005782), endoplasmic reticulum membrane (GO:0005789), cytosol (GO:0005829)
Reactome top-level categories
Rollup of top-2 pathways:
| Category | Pathways |
|---|---|
| Signaling by Retinoic Acid | 1 |
| Protein localization | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| retinoid metabolic process | 2 |
| olefinic compound metabolic process | 2 |
| steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 2 |
| alcohol dehydrogenase (NADP+) activity | 2 |
| intracellular membrane-bounded organelle | 2 |
| cytoplasm | 2 |
| peroxisome | 2 |
| small molecule metabolic process | 1 |
| lipid metabolic process | 1 |
| metabolic process | 1 |
| aldehyde metabolic process | 1 |
| positive regulation of metabolic process | 1 |
| reactive oxygen species metabolic process | 1 |
| regulation of reactive oxygen species metabolic process | 1 |
| primary alcohol metabolic process | 1 |
| hormone metabolic process | 1 |
| oxidoreductase activity, acting on NAD(P)H | 1 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1 |
| protein binding | 1 |
| retinol metabolic process | 1 |
| catalytic activity | 1 |
| microbody | 1 |
| microbody membrane | 1 |
| microbody lumen | 1 |
| organelle membrane | 1 |
| nuclear outer membrane-endoplasmic reticulum membrane network | 1 |
| endoplasmic reticulum subcompartment | 1 |
| cellular anatomical structure | 1 |
Protein interactions and networks
STRING
3410 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| DHRS4 | ACADS | P16219 | 819 |
| DHRS4 | AVP | P01185 | 692 |
| DHRS4 | EHHADH | Q08426 | 618 |
| DHRS4 | ALDH1A1 | P00352 | 535 |
| DHRS4 | CBR4 | Q8N4T8 | 497 |
| DHRS4 | ZNF780A | O75290 | 482 |
| DHRS4 | RDH11 | Q8TC12 | 468 |
| DHRS4 | ACER3 | Q9NUN7 | 464 |
| DHRS4 | GRTP1 | Q5TC63 | 449 |
| DHRS4 | CYP1A1 | P04798 | 447 |
| DHRS4 | AKR1C4 | P17516 | 441 |
| DHRS4 | TIMM21 | Q9BVV7 | 438 |
| DHRS4 | AOX1 | Q06278 | 437 |
| DHRS4 | SIRT3 | Q9NTG7 | 437 |
| DHRS4 | MYOZ3 | Q8TDC0 | 436 |
IntAct
93 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| C1QTNF9 | C1QTNF9B | psi-mi:“MI:0914”(association) | 0.780 |
| PCCB | PCCA | psi-mi:“MI:0914”(association) | 0.770 |
| HEXA | HEXB | psi-mi:“MI:0914”(association) | 0.730 |
| RCC1L | NME6 | psi-mi:“MI:0914”(association) | 0.720 |
| MRPL37 | HSPD1 | psi-mi:“MI:0914”(association) | 0.710 |
| KLHL6 | NUDCD3 | psi-mi:“MI:0914”(association) | 0.670 |
| SINHCAF | TNRC18 | psi-mi:“MI:0914”(association) | 0.640 |
| BIRC7 | HTRA2 | psi-mi:“MI:0914”(association) | 0.640 |
| SDC2 | PDPK1 | psi-mi:“MI:0914”(association) | 0.640 |
| SUN2 | POTEF | psi-mi:“MI:0914”(association) | 0.530 |
| PRELP | AMD1 | psi-mi:“MI:0914”(association) | 0.530 |
| ALDH1B1 | DHRS4 | psi-mi:“MI:0914”(association) | 0.530 |
| DHRS4 | NDUFS2 | psi-mi:“MI:0914”(association) | 0.530 |
| PLAUR | XRCC3 | psi-mi:“MI:0914”(association) | 0.530 |
| ATP5F1D | NDUFB5 | psi-mi:“MI:0914”(association) | 0.530 |
| PRDX3 | OPA1 | psi-mi:“MI:0914”(association) | 0.530 |
| FAHD1 | CLUH | psi-mi:“MI:0914”(association) | 0.530 |
| ACADVL | APC | psi-mi:“MI:0914”(association) | 0.530 |
| SUN2 | PIP4K2A | psi-mi:“MI:0914”(association) | 0.530 |
| CD44 | PDPK1 | psi-mi:“MI:0914”(association) | 0.530 |
| SUN2 | PIP | psi-mi:“MI:0914”(association) | 0.530 |
| DGKA | DHRS4 | psi-mi:“MI:0915”(physical association) | 0.400 |
BioGRID (128): DHRS4 (Affinity Capture-MS), DHRS4 (Affinity Capture-MS), DHRS4 (Affinity Capture-MS), DHRS4 (Affinity Capture-MS), DHRS4 (Affinity Capture-MS), DHRS4 (Affinity Capture-MS), DHRS4 (Affinity Capture-MS), DHRS4 (Affinity Capture-MS), DHRS4 (Affinity Capture-MS), DHRS4 (Affinity Capture-MS), DHRS4 (Affinity Capture-MS), DHRS4 (Co-fractionation), DHRS4 (Affinity Capture-MS), CLPB (Affinity Capture-MS), NDUFAF5 (Affinity Capture-MS)
ESM2 similar proteins: A0A0B4GU97, A0A1A9TAK5, A0A1C9II22, A0A1Y0BRF8, A0A384JQF5, A0A3G9HAL8, A0A3Q8GYY4, A0A411PQN6, A0A5B8YU81, A0A6S6QNE4, A0A8F5XX49, A3LZU7, B0ZT44, B6HV34, D3J0Z1, E9ET40, F4IKM1, F4J300, F9XMW6, O00058, O49332, O80714, O93868, P0DKI3, P50162, P50163, P50164, P50165, P9WES5, Q13268, Q14RS1, Q21929, Q42182, Q4WZ66, Q5RCF8, Q8RX32, Q8SPU8, Q99LB2, Q9BTZ2, Q9C826
Diamond homologs: A0A023I4C8, A0A097ZPC9, A0A0F7U1Z1, A0A0H3KNE7, A0A0U5GHD4, A0A1E1FFP5, A0A1U8QWA2, A0A1Y0BRF8, A0A2I1BSW8, A0A384JQF5, A0A3G9HAL8, A0A455R5K2, A0A6S6QNE4, A0A8D5M6H6, A0QYC2, A6SSW9, A7IQH5, A9CES4, B6H065, B6HV34, G5DGA8, I6YCF0, K2RLM6, N4WE73, O02691, O32291, O74628, P0DMP5, P0DOV5, P15428, P19992, P46331, P55541, P55575, P66782, P9WEP2, P9WEQ5, P9WGQ4, P9WGQ5, P9WGQ8
SIGNOR signaling
0 interactions.
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 118 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Phase I - Functionalization of compounds | 5 | 12.9× | 3e-03 |
| Peroxisomal protein import | 6 | 12.2× | 1e-03 |
| Mitochondrial protein degradation | 9 | 12.1× | 2e-05 |
| Respiratory electron transport | 6 | 6.7× | 7e-03 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| fatty acid beta-oxidation | 5 | 17.0× | 3e-03 |
| aerobic respiration | 5 | 11.3× | 9e-03 |
| mitochondrion organization | 6 | 8.3× | 9e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
91 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 68 |
| Likely benign | 6 |
| Benign | 2 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1220 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 14:23955032:CAGGA:C | acceptor_loss | 1.0000 |
| 14:23955033:A:AG | acceptor_gain | 1.0000 |
| 14:23955033:AG:A | acceptor_gain | 1.0000 |
| 14:23955033:AGGA:A | acceptor_loss | 1.0000 |
| 14:23955034:G:A | acceptor_loss | 1.0000 |
| 14:23955034:G:GT | acceptor_gain | 1.0000 |
| 14:23955034:GG:G | acceptor_gain | 1.0000 |
| 14:23955034:GGATC:G | acceptor_gain | 1.0000 |
| 14:23965838:GAGA:G | donor_gain | 1.0000 |
| 14:23965840:GA:G | donor_gain | 1.0000 |
| 14:23965842:G:GG | donor_gain | 1.0000 |
| 14:23965984:G:GG | donor_gain | 1.0000 |
| 14:23966413:GGATG:G | donor_gain | 1.0000 |
| 14:23966414:G:GT | donor_gain | 1.0000 |
| 14:23966423:G:GT | donor_gain | 1.0000 |
| 14:23966424:A:T | donor_gain | 1.0000 |
| 14:23966428:G:T | donor_gain | 1.0000 |
| 14:23966482:G:T | donor_gain | 1.0000 |
| 14:23967209:A:AG | acceptor_gain | 1.0000 |
| 14:23967210:G:GG | acceptor_gain | 1.0000 |
| 14:23955026:T:A | acceptor_gain | 0.9900 |
| 14:23955031:ACAG:A | acceptor_gain | 0.9900 |
| 14:23955034:GGA:G | acceptor_gain | 0.9900 |
| 14:23955034:GGAT:G | acceptor_gain | 0.9900 |
| 14:23955208:CCACG:C | donor_loss | 0.9900 |
| 14:23955209:CACG:C | donor_loss | 0.9900 |
| 14:23955212:GGTG:G | donor_loss | 0.9900 |
| 14:23955213:G:C | donor_loss | 0.9900 |
| 14:23955213:G:GG | donor_gain | 0.9900 |
| 14:23955214:T:G | donor_loss | 0.9900 |
AlphaMissense
1800 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 14:23966308:A:T | K186I | 0.999 |
| 14:23955090:A:C | S62R | 0.998 |
| 14:23955092:C:A | S62R | 0.998 |
| 14:23955092:C:G | S62R | 0.998 |
| 14:23959995:T:A | W134R | 0.997 |
| 14:23959995:T:C | W134R | 0.997 |
| 14:23966309:A:C | K186N | 0.997 |
| 14:23966309:A:T | K186N | 0.997 |
| 14:23966375:C:A | N208K | 0.997 |
| 14:23966375:C:G | N208K | 0.997 |
| 14:23955040:G:A | G45D | 0.996 |
| 14:23966304:A:C | S185R | 0.996 |
| 14:23966306:T:A | S185R | 0.996 |
| 14:23966306:T:G | S185R | 0.996 |
| 14:23966378:C:G | C209W | 0.996 |
| 14:23965957:T:C | S169P | 0.994 |
| 14:23953907:C:A | S40Y | 0.993 |
| 14:23965776:T:A | N141K | 0.993 |
| 14:23965776:T:G | N141K | 0.993 |
| 14:23965958:C:A | S169Y | 0.993 |
| 14:23966295:T:C | Y182H | 0.993 |
| 14:23953907:C:T | S40F | 0.992 |
| 14:23955093:A:C | S63R | 0.992 |
| 14:23955094:G:T | S63I | 0.992 |
| 14:23955095:C:A | S63R | 0.992 |
| 14:23955095:C:G | S63R | 0.992 |
| 14:23966401:C:T | T217I | 0.992 |
| 14:23953910:C:T | T41I | 0.991 |
| 14:23953916:G:A | G43E | 0.991 |
| 14:23955058:G:C | R51P | 0.991 |
dbSNP variants (sampled 300 via entrez): RS1000147013 (14:23954276 G>A,C), RS1000533366 (14:23951858 G>A,T), RS1000987488 (14:23952050 C>G), RS1001262882 (14:23955638 A>T), RS1001315120 (14:23955891 A>G), RS1001518884 (14:23967185 T>A,C), RS1002236431 (14:23968331 T>C), RS1002288883 (14:23968556 T>C), RS1002567214 (14:23969701 G>A,C), RS1002781681 (14:23961033 C>A), RS1002857425 (14:23960005 T>C), RS1002928326 (14:23956738 G>A), RS1002982086 (14:23956868 G>C,T), RS1003035752 (14:23952144 T>C), RS1003211130 (14:23957465 A>C,G)
Disease associations
OMIM: gene MIM:611596 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
1 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST006865_15 | Bipolar disorder | 5.000000e-06 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
26 total (human), top 26 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| testosterone enanthate | affects expression | 1 |
| bisphenol A | decreases expression | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | decreases expression | 1 |
| sodium arsenite | decreases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| ICG 001 | increases expression | 1 |
| bisphenol B | increases expression | 1 |
| abrine | increases expression | 1 |
| bisphenol S | increases expression | 1 |
| jinfukang | increases expression | 1 |
| bisphenol AF | increases expression | 1 |
| Sunitinib | increases expression | 1 |
| Arsenic | affects methylation | 1 |
| Atrazine | decreases expression | 1 |
| Doxorubicin | decreases expression | 1 |
| Hydrogen Peroxide | affects expression | 1 |
| NADP | affects binding, increases activity | 1 |
| Selenium | increases expression | 1 |
| Smoke | decreases expression | 1 |
| Tretinoin | decreases expression | 1 |
| Vitamin E | increases expression | 1 |
| Aflatoxin B1 | decreases methylation | 1 |
| Asbestos, Crocidolite | increases expression | 1 |
| Okadaic Acid | decreases expression | 1 |
| Copper Sulfate | decreases expression | 1 |
Cellosaurus cell lines
2 cell lines: 2 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_SK78 | HAP1 DHRS4 (-) 1 | Cancer cell line | Male |
| CVCL_SK79 | HAP1 DHRS4 (-) 2 | Cancer cell line | Male |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.