DHRS4

gene
On this page

Also known as SCAD-SRLSDR-SRLhumNRDRFLJ11008SDR25C2

Summary

DHRS4 (dehydrogenase/reductase 4, HGNC:16985) is a protein-coding gene on chromosome 14q11.2, encoding Dehydrogenase/reductase SDR family member 4 (Q9BTZ2). NADPH-dependent oxidoreductase which catalyzes the reduction of a variety of compounds bearing carbonyl groups including ketosteroids, alpha-dicarbonyl compounds, aldehydes, aromatic ketones and quinones.

Enables identical protein binding activity; oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor; and oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor. Involved in several processes, including ketone metabolic process; positive regulation of reactive oxygen species metabolic process; and steroid metabolic process. Located in nucleus and peroxisomal membrane.

Source: NCBI Gene 10901 — RefSeq curated summary.

At a glance

  • GWAS associations: 1
  • Clinical variants (ClinVar): 91 total
  • MANE Select transcript: NM_021004

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:16985
Approved symbolDHRS4
Namedehydrogenase/reductase 4
Location14q11.2
Locus typegene with protein product
StatusApproved
AliasesSCAD-SRL, SDR-SRL, humNRDR, FLJ11008, SDR25C2
Ensembl geneENSG00000157326
Ensembl biotypeprotein_coding
OMIM611596
Entrez10901

Gene structure

Transcript identifiers

Ensembl transcripts: 14 — 14 protein_coding

ENST00000313250, ENST00000397074, ENST00000397075, ENST00000543741, ENST00000558263, ENST00000558581, ENST00000559632, ENST00000559975, ENST00000875626, ENST00000875627, ENST00000875628, ENST00000875629, ENST00000875630, ENST00000875631

RefSeq mRNA: 7 — MANE Select: NM_021004 NM_001282987, NM_001282988, NM_001282989, NM_001282990, NM_001282991, NM_001411004, NM_021004

CCDS: CCDS61408, CCDS61409, CCDS61410, CCDS61411, CCDS61412, CCDS91852, CCDS9605

Canonical transcript exons

ENST00000313250 — 8 exons

ExonStartEnd
ENSE000015272042395377023953916
ENSE000016276322395990223960003
ENSE000016765732395503523955212
ENSE000016793882396628323966417
ENSE000017139102396576223965832
ENSE000025634342396875723969279
ENSE000035087212396593223965983
ENSE000036438502396721123967266

Expression profiles

Bgee: expression breadth ubiquitous, 140 present calls, max score 96.06.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 28.5209 / max 144.7872, expressed in 1809 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter IDTPM avgSamples expressed
13895828.52091809
1389620.6104262

Top tissues by expression

140 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
right lobe of liverUBERON:000111496.06gold quality
adult mammalian kidneyUBERON:000008295.73gold quality
duodenumUBERON:000211495.48gold quality
liverUBERON:000210795.10gold quality
mucosa of transverse colonUBERON:000499195.00gold quality
monocyteCL:000057694.82gold quality
lower esophagus mucosaUBERON:003583494.81gold quality
leukocyteCL:000073894.45gold quality
apex of heartUBERON:000209893.33gold quality
left adrenal gland cortexUBERON:003582593.06gold quality
heart left ventricleUBERON:000208492.98gold quality
gastrocnemiusUBERON:000138892.95gold quality
kidneyUBERON:000211392.82gold quality
left adrenal glandUBERON:000123492.77gold quality
right adrenal gland cortexUBERON:003582792.75gold quality
muscle of legUBERON:000138392.69gold quality
skeletal muscle organUBERON:001489292.61gold quality
transverse colonUBERON:000115792.52gold quality
right adrenal glandUBERON:000123392.34gold quality
lower esophagusUBERON:001347392.30gold quality
lower esophagus muscularis layerUBERON:003583392.28gold quality
cortex of kidneyUBERON:000122592.12gold quality
hindlimb stylopod muscleUBERON:000425291.99gold quality
esophagusUBERON:000104391.81gold quality
small intestineUBERON:000210891.72gold quality
esophagus mucosaUBERON:000246991.72gold quality
small intestine Peyer’s patchUBERON:000345491.68gold quality
colonUBERON:000115591.60gold quality
skin of legUBERON:000151191.53gold quality
skin of abdomenUBERON:000141691.52gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

ExperimentMarker?Max mean expression
E-ANND-3yes9.70

Regulation

Is transcription factor: no

miRNA regulators (miRDB)

14 targeting DHRS4, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-6748-5P100.0065.811057
HSA-MIR-513A-5P100.0069.772465
HSA-MIR-450B-5P99.9271.483175
HSA-MIR-205399.5769.151635
HSA-MIR-4753-5P99.5468.511356
HSA-MIR-20A-3P99.4469.101575
HSA-MIR-3922-3P99.2564.961136
HSA-MIR-317699.2564.35954
HSA-MIR-7854-3P99.0866.261117
HSA-MIR-29A-5P99.0868.591813
HSA-MIR-92299.0267.231838
HSA-MIR-2355-5P98.8365.511589
HSA-MIR-500A-3P97.6067.48595
HSA-MIR-6869-3P83.1765.8830

Literature-anchored findings (GeneRIF, showing 11)

  • Alternatively spliced variant of NADP(H)-dependent retinol dehydrogenase/reductase with deletion of exon 3 is associated with cervical squamous carcinoma (PMID:17230527)
  • Results suggest a novel mechanism of cold inactivation and role of the inducible human DHRS4 in 3beta-hydroxysteroid synthesis and xenobiotic carbonyl metabolism (PMID:18571493)
  • Novel alternative splicing variants, transcribed from an alternative transcrioption start sites within the DHRS4 gene cluster were identified in this study. (PMID:18754758)
  • Analysis of exon composition in the transcripts of DHRS4 gene cluster revealed that exon 1 was absent in all the transcripts initiated from exon a1 of DHRS4L2 and exon a2 of DHRS4L1. (PMID:20525226)
  • This study demonstrates that AS1DHRS4, as a long noncoding RNA, simultaneously controls the chromatin state of each gene within the DHRS4 gene cluster in a discriminative manner. (PMID:22891334)
  • A rapid evolution rate brought the human DHRS2 gene, duplicated form of the DHRS4 one, to code a SDR enzyme having subcellular localization, synthesis regulation and specialized cellular functions very different from those of the human DHRS4 enzyme. (PMID:23036705)
  • DHRS2 and DHRS4 genes are syntenic outparalogues originating from a duplication of the DHRS4 gene that took place before the formation of the mammalian clade (PMID:23036705)
  • NRDRB1, an alternatively spliced isoform of NRDR in vivo functions better than NRDR as a dicarbonyl reductase for xenobiotics containing reactive carbonyls. (PMID:23128527)
  • AS1eRNA-driven DNA looping and activating histone modifications promote the expression of DHRS4-AS1 to economically control the DHRS4 gene cluster. (PMID:26864944)
  • An analysis of the relationship between the promoter characteristics and RNA expression of the DHRS4 gene cluster indicated that the development of CpG islands, in addition to the promoter sequence, during mammalian evolution could modulate the dose compensatory regulation of the copy number-varied DHRS4 gene cluster (PMID:27323117)
  • LncRNA DHRS4-AS1 ameliorates hepatocellular carcinoma by suppressing proliferation and promoting apoptosis via miR-522-3p/SOCS5 axis. (PMID:34666613)

Cross-species orthologs

25 orthologs

OrganismSymbolGene ID
danio_reriocbr1lENSDARG00000021149
danio_reriozgc:101858ENSDARG00000035129
danio_reriozgc:163083ENSDARG00000099873
danio_reriozgc:92161ENSDARG00000101749
danio_reriozgc:123284ENSDARG00000102720
danio_reriozgc:112146ENSDARG00000104829
mus_musculusDhrs4ENSMUSG00000022210
rattus_norvegicusDhrs4ENSRNOG00000018239
drosophila_melanogasterCG7601FBGN0027583
drosophila_melanogasterCG12171FBGN0037354
drosophila_melanogasterCG3699FBGN0040349
drosophila_melanogasterCG31546FBGN0051546
drosophila_melanogasterCG31548FBGN0051548
drosophila_melanogasterCG31549FBGN0051549
caenorhabditis_elegansWBGENE00000970
caenorhabditis_elegansWBGENE00000975
caenorhabditis_elegansWBGENE00000981
caenorhabditis_elegansWBGENE00000993
caenorhabditis_elegansWBGENE00008985
caenorhabditis_elegansWBGENE00008986
caenorhabditis_elegansWBGENE00011424
caenorhabditis_elegansY47G6A.21WBGENE00021646
caenorhabditis_elegansY47G6A.22WBGENE00021647
caenorhabditis_elegansWBGENE00022809
caenorhabditis_elegansWBGENE00219274

Paralogs (13): RDH8 (ENSG00000080511), DHRS7 (ENSG00000100612), DHRS2 (ENSG00000100867), DHRS7B (ENSG00000109016), HSD11B1 (ENSG00000117594), HSDL2 (ENSG00000119471), DHRS1 (ENSG00000157379), CBR1 (ENSG00000159228), CBR3 (ENSG00000159231), HSD11B1L (ENSG00000167733), DHRS7C (ENSG00000184544), DHRS4L2 (ENSG00000187630), DHRS11 (ENSG00000278535)

Protein

Protein identifiers

Dehydrogenase/reductase SDR family member 4Q9BTZ2 (reviewed: Q9BTZ2)

Alternative names: NADPH-dependent carbonyl reductase, NADPH-dependent retinol dehydrogenase/reductase, Peroxisomal short-chain alcohol dehydrogenase, SCAD-SRL, Short chain dehydrogenase/reductase family 25C member 2, Short-chain dehydrogenase/reductase family member 4

All UniProt accessions (3): Q9BTZ2, F5GWZ1, H0YNP7

UniProt curated annotations — full annotation on UniProt →

Function. NADPH-dependent oxidoreductase which catalyzes the reduction of a variety of compounds bearing carbonyl groups including ketosteroids, alpha-dicarbonyl compounds, aldehydes, aromatic ketones and quinones. Reduces 3-ketosteroids and benzil into 3beta-hydroxysteroids and R-benzoin, respectively, in contrast to the stereoselectivity of non-primate DHRS4s which produce 3alpha-hydroxysteroids and S-benzoin. Displays low activity toward all-trans-retinal and no activity toward 9-cis-retinal as compared to non-primate mammals. In the reverse reaction, catalyze the NAD-dependent oxidation of 3beta-hydroxysteroids and alcohol, but with much lower efficiency. Involved in the metabolism of 3beta-hydroxysteroids, isatin and xenobiotic carbonyl compounds. No detected catalytic activity in vitro, possibly due to the lack of catalytic site. NADPH-dependent oxidoreductase which catalyzes the reduction of a variety of compounds bearing carbonyl groups including ketosteroids, alpha-dicarbonyl compounds, aldehydes, aromatic ketones and quinones. Involved in the metabolism of 3beta-hydroxysteroids, isatin and xenobiotic carbonyl compounds. Has a higher catalytic activity for xenobiotic alpha-dicarbonyl compounds, sucha as benzil, than isoform 1 and is involved in benzil detoxification.

Subunit / interactions. Homotetramer.

Subcellular location. Peroxisome Nucleus.

Tissue specificity. Predominantly expressed in normal cervix (at protein level). Expressed in some neoplastic cervical tissues, but not in normal cervix (at protein level). Expressed in a few neoplastic cervical tissues. Expressed in a few neoplastic cervical tissues. High expression in liver.

Activity regulation. Inhibited by flavonoids (quercetin and genistein), cetylpyridium chloride, phenylhexane and valproic acid. Low inhibition is observed with fatty acids (myristic acid and lauric acid). No significant inhibition is observed with barbital, dicumarol, indomethacin, metyrapone, ethacrynic acid, disulfiram, hexestrol and benzodiazepines (diazepam and nitrazepam).

Domain organisation. The C-terminus peroxisomal targeting signal tripeptide is important for peroxisomal import. Once in the peroxisome, it is involved in intersubunit interactions. Three specific residues, Ser-176, Phe-179 and Thr-195 are conserved between primates whereas the respective residues are phenylalanine, leucine, and asparagine in the other mammal enzymes. The two residues at positions 176 and 179 are molecular determinants responsible for the stereoselective reduction of 3-ketosteroids and benzil. The presence of an asparagine at position 195 is important for the maintenance of the quaternary structure and stability at cold temperature. The absence of an asparagine at position 195 destabilizes the quaternary structure, thereby affecting catalytic efficiency toward some substrates and decreasing stability at cold temperature.

Induction. Induced by PPARA ligands clofibrate and Wy14,643.

Miscellaneous. Primate DHRS4s display different stereoselectivity and catalytic efficiency in the oxidoreduction of some substrates as compared to other mammal DHRS4s due to a difference in conserved amino acid residues. Three homologous proteins DHRS4, DHRS4L1, and DHRS4L2 are derived from gene duplication of DHRS4, and the gene cluster is arranged in tandem in chromosome 14.

Similarity. Belongs to the short-chain dehydrogenases/reductases (SDR) family.

Isoforms (8)

UniProt IDNamesCanonical?
Q9BTZ2-11, SDR-SRL3yes
Q9BTZ2-22, SDR-SRL1
Q9BTZ2-33, SDR-SRL2
Q9BTZ2-44, NRDRB1
Q9BTZ2-55, NRDRB2
Q9BTZ2-66, NRDRA1
Q9BTZ2-77, NRDRA2
Q9BTZ2-88, NRDRB1

RefSeq proteins (7): NP_001269916, NP_001269917, NP_001269918, NP_001269919, NP_001269920, NP_001397933, NP_066284* (*=MANE)

Domains & families (InterPro)

IDNameType
IPR002347SDR_famFamily
IPR020904Sc_DH/Rdtase_CSConserved_site
IPR036291NAD(P)-bd_dom_sfHomologous_superfamily

Pfam: PF13561

Enzyme classification (BRENDA):

  • EC 1.1.1.300 — NADP-retinol dehydrogenase (BRENDA: 11 organisms, 101 substrates, 7 inhibitors, 67 Km, 12 kcat entries)

Substrate kinetics (BRENDA)

14 substrates with measured Km, best-characterized 14. Km ranges are aggregated across organisms/conditions.

SubstrateKm (mM)Measurements
ALL-TRANS-RETINAL0.0001–0.519
NADPH0.0005–0.2310
NADP+0.0004–0.89
ALL-TRANS-RETINOL0.0006–1.36
NADH2.22–13004
ALL-TRANS-3-HYDROXYRETINAL0.0032–0.00443
ESTRONE0.0096–0.03073
NAD+0.004–6803
9-CIS-RETINAL0.0001–0.192
RETINAL0.007–0.132
11-CIS-RETINAL0.00011
11-CIS-RETINOL0.00161
13-CIS-RETINAL0.621
9-CIS-RETINOL0.00161

Catalyzed reactions (Rhea), 7 shown:

  • a secondary alcohol + NADP(+) = a ketone + NADPH + H(+) (RHEA:19257)
  • 3beta-hydroxy-5beta-pregnane-20-one + NADP(+) = 5beta-pregnan-3,20-dione + NADPH + H(+) (RHEA:22944)
  • lithocholate + NADP(+) = 3-oxo-5beta-cholan-24-oate + NADPH + H(+) (RHEA:47496)
  • 3-oxo-5beta-cholan-24-oate + NADPH + H(+) = isolithocholate + NADP(+) (RHEA:47520)
  • isatin + NADPH + H(+) = 3-hydroxyindolin-2-one + NADP(+) (RHEA:68608)
  • 5beta-dihydrotestosterone + NADPH + H(+) = 5beta-androstane-3beta,17beta-diol + NADP(+) (RHEA:69012)
  • 5beta-androstane-3,17-dione + NADPH + H(+) = 3beta-hydroxy-5beta-androstane-17-one + NADP(+) (RHEA:69036)

UniProt features (57 total): helix 13, modified residue 9, splice variant 8, strand 7, sequence conflict 5, mutagenesis site 3, binding site 3, sequence variant 2, turn 2, site 2, chain 1, short sequence motif 1, active site 1

Structure

Experimental structures (PDB)

1 structures.

PDBMethodResolution (Å)
3O4RX-RAY DIFFRACTION1.7

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-Q9BTZ2-F191.400.81

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Catalytic / active sites (3): 182 (proton acceptor); 176 (responsible for the stereoselective reduction of 3-ketosteroids into 3beta-hydroxysteroids and benzil into r-benzoin); 179 (responsible for the stereoselective reduction of 3-ketosteroids into 3beta-hydroxysteroids and benzil into r-benzoin)

Ligand- & substrate-binding residues (3): 36–60; 169; 186

Post-translational modifications (9): 105, 216, 216, 220, 227, 234, 140, 92, 92

Mutagenesis-validated functional residues (3):

PositionPhenotype
176decreased reduction activity for benzil, isatin and retinal and increased activity for 5beta-pregnane-3,20-dione and 5be
179decreased reduction activity for isatin and increased activity for 5beta-pregnane-3,20-dione, 5beta-dihydrotestosterone,
195loss of cold catalytic inactivation. loss of cold catalytic inactivation; when associated with f-176 and l-179. switch i

Function

Pathways and Gene Ontology

Reactome pathways

2 pathways

IDPathway
R-HSA-5365859RA biosynthesis pathway
R-HSA-9033241Peroxisomal protein import

MSigDB gene sets: 103 (showing top): GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN, GOBP_REGULATION_OF_HORMONE_LEVELS, GOBP_RETINOL_METABOLIC_PROCESS, AAAYRNCTG_UNKNOWN, GOBP_KETONE_METABOLIC_PROCESS, GOMF_STEROID_DEHYDROGENASE_ACTIVITY_ACTING_ON_THE_CH_OH_GROUP_OF_DONORS_NAD_OR_NADP_AS_ACCEPTOR, GOBP_REGULATION_OF_REACTIVE_OXYGEN_SPECIES_METABOLIC_PROCESS, GOBP_POSITIVE_REGULATION_OF_REACTIVE_OXYGEN_SPECIES_METABOLIC_PROCESS, OCT1_06, GOBP_RETINAL_METABOLIC_PROCESS, GOBP_LIPID_METABOLIC_PROCESS, GOBP_ALDEHYDE_METABOLIC_PROCESS, GOCC_MICROBODY_MEMBRANE, GOMF_OXIDOREDUCTASE_ACTIVITY_ACTING_ON_NAD_P_H, GOMF_OXIDOREDUCTASE_ACTIVITY_ACTING_ON_CH_OH_GROUP_OF_DONORS

GO Biological Process (6): alcohol metabolic process (GO:0006066), steroid metabolic process (GO:0008202), ketone metabolic process (GO:0042180), retinal metabolic process (GO:0042574), positive regulation of reactive oxygen species metabolic process (GO:2000379), retinol metabolic process (GO:0042572)

GO Molecular Function (8): 3-beta-hydroxysteroid 3-dehydrogenase (NADP+) activity (GO:0000253), carbonyl reductase (NADPH) activity (GO:0004090), oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (GO:0016655), alcohol dehydrogenase [NAD(P)+] activity (GO:0018455), 3-beta-hydroxy-5-beta-steroid dehydrogenase (NADP+) activity (GO:0033703), identical protein binding (GO:0042802), all-trans-retinol dehydrogenase (NADP+) activity (GO:0052650), oxidoreductase activity (GO:0016491)

GO Cellular Component (7): nucleus (GO:0005634), mitochondrion (GO:0005739), peroxisome (GO:0005777), peroxisomal membrane (GO:0005778), peroxisomal matrix (GO:0005782), endoplasmic reticulum membrane (GO:0005789), cytosol (GO:0005829)

Reactome top-level categories

Rollup of top-2 pathways:

CategoryPathways
Signaling by Retinoic Acid1
Protein localization1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
retinoid metabolic process2
olefinic compound metabolic process2
steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor2
alcohol dehydrogenase (NADP+) activity2
intracellular membrane-bounded organelle2
cytoplasm2
peroxisome2
small molecule metabolic process1
lipid metabolic process1
metabolic process1
aldehyde metabolic process1
positive regulation of metabolic process1
reactive oxygen species metabolic process1
regulation of reactive oxygen species metabolic process1
primary alcohol metabolic process1
hormone metabolic process1
oxidoreductase activity, acting on NAD(P)H1
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor1
protein binding1
retinol metabolic process1
catalytic activity1
microbody1
microbody membrane1
microbody lumen1
organelle membrane1
nuclear outer membrane-endoplasmic reticulum membrane network1
endoplasmic reticulum subcompartment1
cellular anatomical structure1

Protein interactions and networks

STRING

3410 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
DHRS4ACADSP16219819
DHRS4AVPP01185692
DHRS4EHHADHQ08426618
DHRS4ALDH1A1P00352535
DHRS4CBR4Q8N4T8497
DHRS4ZNF780AO75290482
DHRS4RDH11Q8TC12468
DHRS4ACER3Q9NUN7464
DHRS4GRTP1Q5TC63449
DHRS4CYP1A1P04798447
DHRS4AKR1C4P17516441
DHRS4TIMM21Q9BVV7438
DHRS4AOX1Q06278437
DHRS4SIRT3Q9NTG7437
DHRS4MYOZ3Q8TDC0436

IntAct

93 interactions, top by confidence:

ABTypeScore
C1QTNF9C1QTNF9Bpsi-mi:“MI:0914”(association)0.780
PCCBPCCApsi-mi:“MI:0914”(association)0.770
HEXAHEXBpsi-mi:“MI:0914”(association)0.730
RCC1LNME6psi-mi:“MI:0914”(association)0.720
MRPL37HSPD1psi-mi:“MI:0914”(association)0.710
KLHL6NUDCD3psi-mi:“MI:0914”(association)0.670
SINHCAFTNRC18psi-mi:“MI:0914”(association)0.640
BIRC7HTRA2psi-mi:“MI:0914”(association)0.640
SDC2PDPK1psi-mi:“MI:0914”(association)0.640
SUN2POTEFpsi-mi:“MI:0914”(association)0.530
PRELPAMD1psi-mi:“MI:0914”(association)0.530
ALDH1B1DHRS4psi-mi:“MI:0914”(association)0.530
DHRS4NDUFS2psi-mi:“MI:0914”(association)0.530
PLAURXRCC3psi-mi:“MI:0914”(association)0.530
ATP5F1DNDUFB5psi-mi:“MI:0914”(association)0.530
PRDX3OPA1psi-mi:“MI:0914”(association)0.530
FAHD1CLUHpsi-mi:“MI:0914”(association)0.530
ACADVLAPCpsi-mi:“MI:0914”(association)0.530
SUN2PIP4K2Apsi-mi:“MI:0914”(association)0.530
CD44PDPK1psi-mi:“MI:0914”(association)0.530
SUN2PIPpsi-mi:“MI:0914”(association)0.530
DGKADHRS4psi-mi:“MI:0915”(physical association)0.400

BioGRID (128): DHRS4 (Affinity Capture-MS), DHRS4 (Affinity Capture-MS), DHRS4 (Affinity Capture-MS), DHRS4 (Affinity Capture-MS), DHRS4 (Affinity Capture-MS), DHRS4 (Affinity Capture-MS), DHRS4 (Affinity Capture-MS), DHRS4 (Affinity Capture-MS), DHRS4 (Affinity Capture-MS), DHRS4 (Affinity Capture-MS), DHRS4 (Affinity Capture-MS), DHRS4 (Co-fractionation), DHRS4 (Affinity Capture-MS), CLPB (Affinity Capture-MS), NDUFAF5 (Affinity Capture-MS)

ESM2 similar proteins: A0A0B4GU97, A0A1A9TAK5, A0A1C9II22, A0A1Y0BRF8, A0A384JQF5, A0A3G9HAL8, A0A3Q8GYY4, A0A411PQN6, A0A5B8YU81, A0A6S6QNE4, A0A8F5XX49, A3LZU7, B0ZT44, B6HV34, D3J0Z1, E9ET40, F4IKM1, F4J300, F9XMW6, O00058, O49332, O80714, O93868, P0DKI3, P50162, P50163, P50164, P50165, P9WES5, Q13268, Q14RS1, Q21929, Q42182, Q4WZ66, Q5RCF8, Q8RX32, Q8SPU8, Q99LB2, Q9BTZ2, Q9C826

Diamond homologs: A0A023I4C8, A0A097ZPC9, A0A0F7U1Z1, A0A0H3KNE7, A0A0U5GHD4, A0A1E1FFP5, A0A1U8QWA2, A0A1Y0BRF8, A0A2I1BSW8, A0A384JQF5, A0A3G9HAL8, A0A455R5K2, A0A6S6QNE4, A0A8D5M6H6, A0QYC2, A6SSW9, A7IQH5, A9CES4, B6H065, B6HV34, G5DGA8, I6YCF0, K2RLM6, N4WE73, O02691, O32291, O74628, P0DMP5, P0DOV5, P15428, P19992, P46331, P55541, P55575, P66782, P9WEP2, P9WEQ5, P9WGQ4, P9WGQ5, P9WGQ8

SIGNOR signaling

0 interactions.

Enriched among interaction partners

Reactome pathways and GO biological processes over-represented among this gene’s 118 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.

Reactome pathways:

PathwayPartnersFoldFDR
Phase I - Functionalization of compounds512.9×3e-03
Peroxisomal protein import612.2×1e-03
Mitochondrial protein degradation912.1×2e-05
Respiratory electron transport66.7×7e-03

GO biological processes:

GO termPartnersFoldFDR
fatty acid beta-oxidation517.0×3e-03
aerobic respiration511.3×9e-03
mitochondrion organization68.3×9e-03

Disease & clinical

Clinical variants and AI predictions

ClinVar

91 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic0
Likely pathogenic0
Uncertain significance68
Likely benign6
Benign2

Top pathogenic / likely-pathogenic (0)

SpliceAI

1220 predictions. Top by Δscore:

VariantEffectΔscore
14:23955032:CAGGA:Cacceptor_loss1.0000
14:23955033:A:AGacceptor_gain1.0000
14:23955033:AG:Aacceptor_gain1.0000
14:23955033:AGGA:Aacceptor_loss1.0000
14:23955034:G:Aacceptor_loss1.0000
14:23955034:G:GTacceptor_gain1.0000
14:23955034:GG:Gacceptor_gain1.0000
14:23955034:GGATC:Gacceptor_gain1.0000
14:23965838:GAGA:Gdonor_gain1.0000
14:23965840:GA:Gdonor_gain1.0000
14:23965842:G:GGdonor_gain1.0000
14:23965984:G:GGdonor_gain1.0000
14:23966413:GGATG:Gdonor_gain1.0000
14:23966414:G:GTdonor_gain1.0000
14:23966423:G:GTdonor_gain1.0000
14:23966424:A:Tdonor_gain1.0000
14:23966428:G:Tdonor_gain1.0000
14:23966482:G:Tdonor_gain1.0000
14:23967209:A:AGacceptor_gain1.0000
14:23967210:G:GGacceptor_gain1.0000
14:23955026:T:Aacceptor_gain0.9900
14:23955031:ACAG:Aacceptor_gain0.9900
14:23955034:GGA:Gacceptor_gain0.9900
14:23955034:GGAT:Gacceptor_gain0.9900
14:23955208:CCACG:Cdonor_loss0.9900
14:23955209:CACG:Cdonor_loss0.9900
14:23955212:GGTG:Gdonor_loss0.9900
14:23955213:G:Cdonor_loss0.9900
14:23955213:G:GGdonor_gain0.9900
14:23955214:T:Gdonor_loss0.9900

AlphaMissense

1800 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
14:23966308:A:TK186I0.999
14:23955090:A:CS62R0.998
14:23955092:C:AS62R0.998
14:23955092:C:GS62R0.998
14:23959995:T:AW134R0.997
14:23959995:T:CW134R0.997
14:23966309:A:CK186N0.997
14:23966309:A:TK186N0.997
14:23966375:C:AN208K0.997
14:23966375:C:GN208K0.997
14:23955040:G:AG45D0.996
14:23966304:A:CS185R0.996
14:23966306:T:AS185R0.996
14:23966306:T:GS185R0.996
14:23966378:C:GC209W0.996
14:23965957:T:CS169P0.994
14:23953907:C:AS40Y0.993
14:23965776:T:AN141K0.993
14:23965776:T:GN141K0.993
14:23965958:C:AS169Y0.993
14:23966295:T:CY182H0.993
14:23953907:C:TS40F0.992
14:23955093:A:CS63R0.992
14:23955094:G:TS63I0.992
14:23955095:C:AS63R0.992
14:23955095:C:GS63R0.992
14:23966401:C:TT217I0.992
14:23953910:C:TT41I0.991
14:23953916:G:AG43E0.991
14:23955058:G:CR51P0.991

dbSNP variants (sampled 300 via entrez): RS1000147013 (14:23954276 G>A,C), RS1000533366 (14:23951858 G>A,T), RS1000987488 (14:23952050 C>G), RS1001262882 (14:23955638 A>T), RS1001315120 (14:23955891 A>G), RS1001518884 (14:23967185 T>A,C), RS1002236431 (14:23968331 T>C), RS1002288883 (14:23968556 T>C), RS1002567214 (14:23969701 G>A,C), RS1002781681 (14:23961033 C>A), RS1002857425 (14:23960005 T>C), RS1002928326 (14:23956738 G>A), RS1002982086 (14:23956868 G>C,T), RS1003035752 (14:23952144 T>C), RS1003211130 (14:23957465 A>C,G)

Disease associations

OMIM: gene MIM:611596 | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

1 associations (top):

StudyTraitp-value
GCST006865_15Bipolar disorder5.000000e-06

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 1 entry (VIP=true, CPIC=false)

CTD chemical–gene interactions

26 total (human), top 26 by PubMed support.

ChemicalActions (top 5)PubMed papers
testosterone enanthateaffects expression1
bisphenol Adecreases expression1
tris(1,3-dichloro-2-propyl)phosphatedecreases expression1
sodium arsenitedecreases expression1
di-n-butylphosphoric acidaffects expression1
CGP 52608affects binding, increases reaction1
ICG 001increases expression1
bisphenol Bincreases expression1
abrineincreases expression1
bisphenol Sincreases expression1
jinfukangincreases expression1
bisphenol AFincreases expression1
Sunitinibincreases expression1
Arsenicaffects methylation1
Atrazinedecreases expression1
Doxorubicindecreases expression1
Hydrogen Peroxideaffects expression1
NADPaffects binding, increases activity1
Seleniumincreases expression1
Smokedecreases expression1
Tretinoindecreases expression1
Vitamin Eincreases expression1
Aflatoxin B1decreases methylation1
Asbestos, Crocidoliteincreases expression1
Okadaic Aciddecreases expression1
Copper Sulfatedecreases expression1

Cellosaurus cell lines

2 cell lines: 2 cancer cell line

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_SK78HAP1 DHRS4 (-) 1Cancer cell lineMale
CVCL_SK79HAP1 DHRS4 (-) 2Cancer cell lineMale

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.

No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.