DHRS7B
gene geneOn this page
Also known as DKFZp566O084MGC8916CGI-93SDR32C1
Summary
DHRS7B (dehydrogenase/reductase 7B, HGNC:24547) is a protein-coding gene on chromosome 17p11.2, encoding Peroxisomal reductase activating PPAR-gamma (Q6IAN0). Reductase required for adipogenesis and activation of PPARG nuclear receptor.
Predicted to enable acylglycerone-phosphate reductase (NADP+) activity. Predicted to be involved in ether lipid biosynthetic process. Predicted to act upstream of or within several processes, including brown fat cell differentiation; phosphatidylcholine biosynthetic process; and regulation of cold-induced thermogenesis. Located in membrane.
Source: NCBI Gene 25979 — RefSeq curated summary.
At a glance
- GWAS associations: 3
- Clinical variants (ClinVar): 60 total
- MANE Select transcript:
NM_015510
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:24547 |
| Approved symbol | DHRS7B |
| Name | dehydrogenase/reductase 7B |
| Location | 17p11.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | DKFZp566O084, MGC8916, CGI-93, SDR32C1 |
| Ensembl gene | ENSG00000109016 |
| Ensembl biotype | protein_coding |
| OMIM | 616160 |
| Entrez | 25979 |
Gene structure
Transcript identifiers
Ensembl transcripts: 12 — 7 protein_coding, 4 retained_intron, 1 nonsense_mediated_decay
ENST00000346603, ENST00000395511, ENST00000577350, ENST00000578426, ENST00000579099, ENST00000579303, ENST00000581020, ENST00000581463, ENST00000582161, ENST00000583388, ENST00000881402, ENST00000917446
RefSeq mRNA: 6 — MANE Select: NM_015510
NM_001330159, NM_001393657, NM_001393658, NM_001393659, NM_001393660, NM_015510
CCDS: CCDS11215, CCDS82092
Canonical transcript exons
ENST00000395511 — 7 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001324790 | 21172018 | 21172196 |
| ENSE00002688283 | 21126964 | 21126991 |
| ENSE00002695910 | 21190948 | 21191420 |
| ENSE00003469494 | 21183594 | 21183810 |
| ENSE00003625410 | 21188711 | 21188863 |
| ENSE00003666339 | 21184371 | 21184463 |
| ENSE00003671233 | 21178233 | 21178342 |
Expression profiles
Bgee: expression breadth ubiquitous, 246 present calls, max score 93.26.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 11.7971 / max 68.3655, expressed in 1802 samples.
FANTOM5 promoters (3 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 159897 | 7.2493 | 1768 |
| 159896 | 4.2410 | 1726 |
| 159898 | 0.3069 | 109 |
Top tissues by expression
281 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| hindlimb stylopod muscle | UBERON:0004252 | 93.26 | gold quality |
| muscle of leg | UBERON:0001383 | 91.92 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 91.80 | gold quality |
| gastrocnemius | UBERON:0001388 | 91.60 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 91.50 | gold quality |
| apex of heart | UBERON:0002098 | 91.27 | gold quality |
| triceps brachii | UBERON:0001509 | 91.04 | silver quality |
| calcaneal tendon | UBERON:0003701 | 90.34 | gold quality |
| muscle organ | UBERON:0001630 | 90.25 | gold quality |
| metanephros cortex | UBERON:0010533 | 89.60 | gold quality |
| heart left ventricle | UBERON:0002084 | 89.58 | gold quality |
| cardiac ventricle | UBERON:0002082 | 89.19 | gold quality |
| left testis | UBERON:0004533 | 89.17 | gold quality |
| bronchial epithelial cell | CL:0002328 | 89.12 | gold quality |
| skeletal muscle tissue of biceps brachii | UBERON:0004502 | 89.08 | gold quality |
| left adrenal gland | UBERON:0001234 | 88.85 | gold quality |
| right testis | UBERON:0004534 | 88.74 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 88.71 | gold quality |
| islet of Langerhans | UBERON:0000006 | 88.70 | gold quality |
| right atrium auricular region | UBERON:0006631 | 88.64 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 88.64 | gold quality |
| body of stomach | UBERON:0001161 | 88.63 | gold quality |
| right adrenal gland | UBERON:0001233 | 88.63 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 88.62 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 88.49 | gold quality |
| skin of leg | UBERON:0001511 | 88.47 | gold quality |
| minor salivary gland | UBERON:0001830 | 88.45 | gold quality |
| skin of abdomen | UBERON:0001416 | 88.42 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 88.41 | gold quality |
| epithelium of bronchus | UBERON:0002031 | 88.29 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
40 targeting DHRS7B, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-7110-3P | 100.00 | 73.18 | 2486 |
| HSA-MIR-520G-5P | 99.99 | 66.76 | 658 |
| HSA-MIR-202-5P | 99.78 | 67.65 | 991 |
| HSA-MIR-3156-3P | 99.76 | 66.72 | 939 |
| HSA-MIR-623 | 99.76 | 68.16 | 1170 |
| HSA-MIR-1255A | 99.74 | 68.09 | 744 |
| HSA-MIR-1255B-5P | 99.74 | 68.16 | 741 |
| HSA-MIR-1197 | 99.70 | 67.75 | 1027 |
| HSA-MIR-7-5P | 99.67 | 70.53 | 1809 |
| HSA-MIR-6762-3P | 99.66 | 66.94 | 1188 |
| HSA-MIR-452-5P | 99.65 | 69.63 | 1762 |
| HSA-MIR-4676-3P | 99.65 | 69.31 | 1733 |
| HSA-MIR-892C-3P | 99.65 | 69.38 | 1745 |
| HSA-MIR-6134 | 99.63 | 65.68 | 1537 |
| HSA-MIR-136-5P | 99.50 | 67.26 | 1153 |
| HSA-MIR-1207-5P | 99.49 | 69.11 | 2983 |
| HSA-MIR-122B-5P | 99.46 | 70.81 | 1457 |
| HSA-MIR-4284 | 99.36 | 65.25 | 1293 |
| HSA-MIR-4727-5P | 99.23 | 67.55 | 1154 |
| HSA-MIR-4292 | 99.16 | 65.57 | 1767 |
| HSA-MIR-6791-5P | 99.16 | 65.92 | 1844 |
| HSA-MIR-6780B-3P | 99.13 | 67.18 | 622 |
| HSA-MIR-4763-3P | 99.10 | 67.83 | 2649 |
| HSA-MIR-6738-3P | 99.03 | 67.14 | 1326 |
| HSA-MIR-3190-5P | 98.87 | 64.89 | 1345 |
| HSA-MIR-193A-3P | 98.59 | 66.36 | 769 |
| HSA-MIR-193B-3P | 98.59 | 66.62 | 748 |
| HSA-MIR-640 | 98.44 | 66.93 | 644 |
| HSA-MIR-3620-3P | 97.78 | 64.88 | 772 |
| HSA-MIR-4287 | 97.55 | 67.24 | 1247 |
Cross-species orthologs
15 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | dhrs7b | ENSDARG00000075726 |
| mus_musculus | Dhrs7b | ENSMUSG00000042569 |
| rattus_norvegicus | Dhrs7b | ENSRNOG00000005360 |
| drosophila_melanogaster | CG7601 | FBGN0027583 |
| drosophila_melanogaster | CG31546 | FBGN0051546 |
| drosophila_melanogaster | CG31548 | FBGN0051548 |
| caenorhabditis_elegans | WBGENE00000970 | |
| caenorhabditis_elegans | WBGENE00000975 | |
| caenorhabditis_elegans | WBGENE00000981 | |
| caenorhabditis_elegans | WBGENE00000993 | |
| caenorhabditis_elegans | WBGENE00008985 | |
| caenorhabditis_elegans | WBGENE00008986 | |
| caenorhabditis_elegans | WBGENE00011424 | |
| caenorhabditis_elegans | WBGENE00022809 | |
| caenorhabditis_elegans | WBGENE00219274 |
Paralogs (13): RDH8 (ENSG00000080511), DHRS7 (ENSG00000100612), DHRS2 (ENSG00000100867), HSD11B1 (ENSG00000117594), HSDL2 (ENSG00000119471), DHRS4 (ENSG00000157326), DHRS1 (ENSG00000157379), CBR1 (ENSG00000159228), CBR3 (ENSG00000159231), HSD11B1L (ENSG00000167733), DHRS7C (ENSG00000184544), DHRS4L2 (ENSG00000187630), DHRS11 (ENSG00000278535)
Protein
Protein identifiers
Peroxisomal reductase activating PPAR-gamma — Q6IAN0 (reviewed: Q6IAN0)
Alternative names: Dehydrogenase/reductase SDR family member 7B, Short-chain dehydrogenase/reductase family 32C member 1
All UniProt accessions (6): Q6IAN0, A0A0C4DGQ8, J3KRS1, J3QKT1, J3QLJ8, J3QLK1
UniProt curated annotations — full annotation on UniProt →
Function. Reductase required for adipogenesis and activation of PPARG nuclear receptor. Can convert acyl and alkyl dihydroxyacetone-phosphate (DHAP) into glycerolipids and ether lipids, respectively, synthesizing ether-linked phospholipids that act as agonists for PPARG. Also regulates adipogenesis by preventing adipocyte browning: following import into the nucleus, interacts with PRDM16, inhibiting the interaction between PRDM16 and PPARG and preventing differentiation of brown adipocytes.
Subunit / interactions. Interacts with PRDM16; preventing the interaction between PRDM16 and PPARG.
Subcellular location. Peroxisome membrane. Endoplasmic reticulum membrane. Nucleus.
Similarity. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
RefSeq proteins (6): NP_001317088, NP_001380586, NP_001380587, NP_001380588, NP_001380589, NP_056325* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR002347 | SDR_fam | Family |
| IPR020904 | Sc_DH/Rdtase_CS | Conserved_site |
| IPR036291 | NAD(P)-bd_dom_sf | Homologous_superfamily |
Pfam: PF00106
Catalyzed reactions (Rhea), 2 shown:
- 1-hexadecanoyl-sn-glycero-3-phosphate + NADP(+) = 1-hexadecanoylglycerone 3-phosphate + NADPH + H(+) (RHEA:17341)
- a 1-O-alkylglycerone 3-phosphate + NADPH + H(+) = a 1-O-alkyl-sn-glycero-3-phosphate + NADP(+) (RHEA:36175)
UniProt features (15 total): binding site 6, sequence conflict 3, topological domain 2, chain 1, transmembrane region 1, short sequence motif 1, active site 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q6IAN0-F1 | 92.82 | 0.85 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 207 (proton acceptor)
Ligand- & substrate-binding residues (6): 211; 242; 62; 64; 194; 207
Function
Pathways and Gene Ontology
Reactome pathways
1 pathways
| ID | Pathway |
|---|---|
| R-HSA-75896 | Plasmalogen biosynthesis |
MSigDB gene sets: 100 (showing top):
GSE45365_HEALTHY_VS_MCMV_INFECTION_CD8_TCELL_IFNAR_KO_UP, PICCALUGA_ANGIOIMMUNOBLASTIC_LYMPHOMA_UP, GOBP_LIPID_METABOLIC_PROCESS, GOBP_LIPID_BIOSYNTHETIC_PROCESS, GOCC_MICROBODY_MEMBRANE, GOMF_OXIDOREDUCTASE_ACTIVITY_ACTING_ON_CH_OH_GROUP_OF_DONORS, BERENJENO_TRANSFORMED_BY_RHOA_UP, BURTON_ADIPOGENESIS_6, NUYTTEN_EZH2_TARGETS_DN, GOCC_MICROBODY, MARSON_BOUND_BY_E2F4_UNSTIMULATED, GOCC_NUCLEAR_OUTER_MEMBRANE_ENDOPLASMIC_RETICULUM_MEMBRANE_NETWORK, GOCC_ORGANELLE_SUBCOMPARTMENT, MULLIGHAN_MLL_SIGNATURE_1_UP, YOSHIMURA_MAPK8_TARGETS_UP
GO Biological Process (1): ether lipid biosynthetic process (GO:0008611)
GO Molecular Function (3): acylglycerone-phosphate reductase (NADP+) activity (GO:0000140), oxidoreductase activity (GO:0016491), oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (GO:0016616)
GO Cellular Component (5): peroxisomal membrane (GO:0005778), endoplasmic reticulum membrane (GO:0005789), membrane (GO:0016020), cytoplasm (GO:0005737), endoplasmic reticulum (GO:0005783)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| Wax and plasmalogen biosynthesis | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 2 |
| lipid biosynthetic process | 1 |
| ether lipid metabolic process | 1 |
| glycerol ether biosynthetic process | 1 |
| oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | 1 |
| catalytic activity | 1 |
| oxidoreductase activity, acting on CH-OH group of donors | 1 |
| peroxisome | 1 |
| microbody membrane | 1 |
| organelle membrane | 1 |
| nuclear outer membrane-endoplasmic reticulum membrane network | 1 |
| endoplasmic reticulum subcompartment | 1 |
| intracellular anatomical structure | 1 |
| cytoplasm | 1 |
| endomembrane system | 1 |
| intracellular membrane-bounded organelle | 1 |
Protein interactions and networks
STRING
3309 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| DHRS7B | SARDH | Q9UL12 | 661 |
| DHRS7B | GNPAT | O15228 | 597 |
| DHRS7B | TLCD1 | Q96CP7 | 561 |
| DHRS7B | AGPS | O00116 | 489 |
| DHRS7B | NATD1 | Q8N6N6 | 480 |
| DHRS7B | KLHL18 | O94889 | 474 |
| DHRS7B | MEIOB | Q8N635 | 473 |
| DHRS7B | TYSND1 | Q2T9J0 | 471 |
| DHRS7B | DHRS1 | Q96LJ7 | 448 |
| DHRS7B | E9PNW1 | E9PNW1 | 419 |
| DHRS7B | TMEM11 | P17152 | 414 |
| DHRS7B | CCDC144NL | Q6NUI1 | 398 |
| DHRS7B | MAP2K3 | P46734 | 394 |
| DHRS7B | C16orf89 | Q6UX73 | 393 |
| DHRS7B | PGS1 | Q32NB8 | 389 |
IntAct
96 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| HRAS | RAF1 | psi-mi:“MI:0914”(association) | 0.980 |
| C1QTNF9 | C1QTNF9B | psi-mi:“MI:0914”(association) | 0.780 |
| CFTR | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.710 |
| CFTR | ESYT2 | psi-mi:“MI:0914”(association) | 0.710 |
| SLC1A1 | AGPAT2 | psi-mi:“MI:0914”(association) | 0.640 |
| TRDN | TMEM223 | psi-mi:“MI:0914”(association) | 0.640 |
| GYPB | TCAF2 | psi-mi:“MI:0914”(association) | 0.530 |
| DPEP1 | ILVBL | psi-mi:“MI:0914”(association) | 0.530 |
| CD70 | METTL15 | psi-mi:“MI:0914”(association) | 0.530 |
| LAMP3 | METTL15 | psi-mi:“MI:0914”(association) | 0.530 |
| TMEM184A | SLC33A1 | psi-mi:“MI:0914”(association) | 0.530 |
| TK2 | psi-mi:“MI:0915”(physical association) | 0.400 | |
| GOLT1B | psi-mi:“MI:0914”(association) | 0.350 | |
| NFKB1 | NFKB1 | psi-mi:“MI:0914”(association) | 0.350 |
| JUN | TPM3 | psi-mi:“MI:0914”(association) | 0.350 |
| RIPK4 | VWA8 | psi-mi:“MI:0914”(association) | 0.350 |
| PB1 | ESYT2 | psi-mi:“MI:0914”(association) | 0.350 |
| HSCB | RBP5 | psi-mi:“MI:0914”(association) | 0.350 |
| LRRK2 | psi-mi:“MI:0914”(association) | 0.350 | |
| NMES1 | NDUFS8 | psi-mi:“MI:0914”(association) | 0.350 |
| COQ9 | NDUFS8 | psi-mi:“MI:0914”(association) | 0.350 |
| COQ9 | ACOT7 | psi-mi:“MI:0914”(association) | 0.350 |
| BABAM2 | RPN2 | psi-mi:“MI:0914”(association) | 0.350 |
| ARHGAP31 | TIMM23 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (125): DHRS7B (Affinity Capture-MS), DHRS7B (Co-fractionation), RAB7A (Co-fractionation), DHRS7B (Proximity Label-MS), DHRS7B (Proximity Label-MS), DHRS7B (Affinity Capture-MS), DHRS7B (Affinity Capture-MS), DHRS7B (Affinity Capture-MS), DHRS7B (Affinity Capture-MS), DHRS7B (Affinity Capture-MS), DHRS7B (Affinity Capture-RNA), DHRS7B (Proximity Label-MS), DHRS7B (Affinity Capture-MS), DHRS7B (Affinity Capture-MS), DHRS7B (Affinity Capture-MS)
ESM2 similar proteins: A0PJE2, A4FUZ6, A6QP05, D2WKD9, F1QWW8, O49213, O66148, O75884, O88736, O88851, P13653, P15904, P23591, P30043, P52556, P56658, P56937, Q06136, Q0IH28, Q0VCN1, Q0VFE7, Q13630, Q2KIJ5, Q3T0R4, Q41578, Q42850, Q566S6, Q59987, Q5R6U1, Q5RBE5, Q5RJY4, Q5ZID0, Q62904, Q66KC4, Q67WR2, Q6GV12, Q6IAN0, Q6P5L8, Q6PAY8, Q7XKF3
Diamond homologs: A0A017SE81, A0A0E3D8L9, A0A0U1LQE2, A0A140JWS5, A0A1U8QWA2, A0A5B8YU68, A0QYC2, A7IQF2, C0KTJ6, G0RH19, G4N286, G9N4A9, O16881, O55240, P05406, P0CU71, P0DKC7, P14061, P25970, P35731, P37694, P37959, P40471, P42317, P43713, P45200, P45375, P50160, P50203, P51658, P54554, P55006, P55336, P80873, Q04520, Q09851, Q0IH28, Q0VFE7, Q1QU27, Q1R183
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
60 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 51 |
| Likely benign | 4 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1166 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 17:21144026:GGTTC:G | donor_gain | 1.0000 |
| 17:21172017:GGAA:G | acceptor_gain | 1.0000 |
| 17:21172162:G:GA | donor_gain | 1.0000 |
| 17:21172196:GGTG:G | donor_loss | 1.0000 |
| 17:21172197:G:T | donor_loss | 1.0000 |
| 17:21172198:T:G | donor_loss | 1.0000 |
| 17:21180940:G:GT | donor_gain | 1.0000 |
| 17:21183806:GAAAG:G | donor_gain | 1.0000 |
| 17:21183808:AAGG:A | donor_loss | 1.0000 |
| 17:21183810:GGT:G | donor_loss | 1.0000 |
| 17:21183811:GTAAC:G | donor_loss | 1.0000 |
| 17:21183812:T:G | donor_loss | 1.0000 |
| 17:21188704:T:G | acceptor_gain | 1.0000 |
| 17:21126958:G:GT | donor_gain | 0.9900 |
| 17:21172006:T:TA | acceptor_gain | 0.9900 |
| 17:21172007:G:A | acceptor_gain | 0.9900 |
| 17:21172013:TCCA:T | acceptor_loss | 0.9900 |
| 17:21172014:CCA:C | acceptor_loss | 0.9900 |
| 17:21172015:CAGG:C | acceptor_loss | 0.9900 |
| 17:21172016:A:AC | acceptor_loss | 0.9900 |
| 17:21172016:A:AG | acceptor_gain | 0.9900 |
| 17:21172016:AG:A | acceptor_gain | 0.9900 |
| 17:21172017:G:GG | acceptor_gain | 0.9900 |
| 17:21172017:GG:G | acceptor_gain | 0.9900 |
| 17:21172017:GGA:G | acceptor_gain | 0.9900 |
| 17:21172122:A:AG | donor_gain | 0.9900 |
| 17:21172123:G:GG | donor_gain | 0.9900 |
| 17:21172135:G:GT | donor_gain | 0.9900 |
| 17:21172161:T:TA | donor_gain | 0.9900 |
| 17:21172166:A:AG | donor_gain | 0.9900 |
AlphaMissense
2100 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 17:21184421:A:C | S193R | 0.996 |
| 17:21184423:C:A | S193R | 0.996 |
| 17:21184423:C:G | S193R | 0.996 |
| 17:21184424:A:C | S194R | 0.996 |
| 17:21184426:C:A | S194R | 0.996 |
| 17:21184426:C:G | S194R | 0.996 |
| 17:21188720:C:T | S210F | 0.996 |
| 17:21183720:A:C | S146R | 0.994 |
| 17:21183722:C:A | S146R | 0.994 |
| 17:21183722:C:G | S146R | 0.994 |
| 17:21188720:C:A | S210Y | 0.994 |
| 17:21184463:T:C | Y207H | 0.992 |
| 17:21188724:G:C | K211N | 0.992 |
| 17:21188724:G:T | K211N | 0.992 |
| 17:21188751:T:G | C220W | 0.992 |
| 17:21183727:G:C | R148P | 0.991 |
| 17:21188717:C:A | A209D | 0.991 |
| 17:21188753:T:C | L221P | 0.991 |
| 17:21188816:C:T | T242I | 0.991 |
| 17:21184425:G:T | S194I | 0.990 |
| 17:21183782:C:A | N166K | 0.989 |
| 17:21183782:C:G | N166K | 0.989 |
| 17:21184413:T:A | V190D | 0.989 |
| 17:21188797:A:C | S236R | 0.989 |
| 17:21188799:C:A | S236R | 0.989 |
| 17:21188799:C:G | S236R | 0.989 |
| 17:21183726:C:A | R148S | 0.988 |
| 17:21184442:A:C | S200R | 0.988 |
| 17:21184444:C:A | S200R | 0.988 |
| 17:21184444:C:G | S200R | 0.988 |
dbSNP variants (sampled 300 via entrez): RS1000036376 (17:21167823 A>G), RS1000113713 (17:21156118 A>G), RS1000231815 (17:21160888 A>G,T), RS1000286181 (17:21136624 T>C), RS1000362300 (17:21131968 A>G), RS1000404512 (17:21154323 A>C,T), RS1000416043 (17:21175804 C>G), RS1000418377 (17:21173778 G>T), RS1000435634 (17:21154573 G>A), RS1000502031 (17:21189485 T>A,C), RS1000545729 (17:21138608 T>C), RS1000645298 (17:21131731 G>A), RS1000722124 (17:21145165 A>G), RS1000734539 (17:21155705 A>C), RS1000764341 (17:21156012 A>G)
Disease associations
OMIM: gene MIM:616160 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
3 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST002039_6 | Blood trace element (Se levels) | 1.000000e-06 |
| GCST005951_14 | Body mass index | 5.000000e-10 |
| GCST008032_8 | Fasting blood glucose | 3.000000e-08 |
EFO canonical traits (1, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004340 | body mass index |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
28 total (human), top 28 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Valproic Acid | affects expression, increases expression | 3 |
| aristolochic acid I | increases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| sodium arsenite | decreases expression, increases abundance | 1 |
| aflatoxin B2 | increases methylation | 1 |
| perfluorooctane sulfonic acid | increases expression | 1 |
| bisphenol B | increases expression | 1 |
| abrine | increases expression | 1 |
| bisphenol S | affects expression | 1 |
| bisphenol AF | increases expression | 1 |
| Temozolomide | increases expression | 1 |
| Air Pollutants | increases abundance, increases expression | 1 |
| Arsenic | decreases expression, increases abundance | 1 |
| Atrazine | decreases expression | 1 |
| Benzo(a)pyrene | increases methylation | 1 |
| Dimethyl Sulfoxide | increases expression | 1 |
| Doxorubicin | decreases expression | 1 |
| Ivermectin | decreases expression | 1 |
| NADP | affects binding, increases activity | 1 |
| Selenium | increases expression | 1 |
| Smoke | increases abundance, increases expression | 1 |
| Tunicamycin | increases expression | 1 |
| 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide | decreases expression | 1 |
| Isotretinoin | decreases expression | 1 |
| Aflatoxin B1 | affects methylation | 1 |
| Copper Sulfate | decreases expression | 1 |
| Lactic Acid | decreases expression | 1 |
| Acrylamide | increases expression | 1 |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.