DHX9-AS1
gene geneOn this page
Summary
DHX9-AS1 (DHX9 antisense RNA 1, HGNC:56097) is a long non-coding RNA gene on chromosome 1q25.3.
At a glance
- Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:56097 |
| Approved symbol | DHX9-AS1 |
| Name | DHX9 antisense RNA 1 |
| Location | 1q25.3 |
| Locus type | RNA, long non-coding |
| Status | Approved |
| Ensembl gene | ENSG00000287808 |
| Ensembl biotype | lncRNA |
| Entrez | 647070 |
| RNAcentral | URS0000BC4571 — lncRNA, 4559 nt, 1 organism(s) |
Gene structure
Transcript identifiers
Ensembl transcripts: 2 — 2 lncRNA
ENST00000661321, ENST00000783266
RefSeq mRNA: 0 — MANE Select: None
Canonical transcript exons
ENST00000661321 — 2 exons
| Exon | Start | End |
|---|---|---|
| ENSE00003853225 | 182837185 | 182837934 |
| ENSE00003866902 | 182839312 | 182839561 |
Expression profiles
Bgee: expression breadth ubiquitous, 239 present calls, max score 97.71.
Top tissues by expression
269 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| buccal mucosa cell | CL:0002336 | 97.71 | gold quality |
| endothelial cell | CL:0000115 | 91.18 | gold quality |
| sperm | CL:0000019 | 89.29 | gold quality |
| male germ cell | CL:0000015 | 87.37 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 82.23 | gold quality |
| left testis | UBERON:0004533 | 81.41 | gold quality |
| right testis | UBERON:0004534 | 81.14 | gold quality |
| testis | UBERON:0000473 | 80.61 | gold quality |
| tendon of biceps brachii | UBERON:0008188 | 80.43 | silver quality |
| cranial nerve II | UBERON:0000941 | 80.11 | gold quality |
| cauda epididymis | UBERON:0004360 | 79.19 | gold quality |
| caput epididymis | UBERON:0004358 | 79.15 | gold quality |
| corpus epididymis | UBERON:0004359 | 78.70 | gold quality |
| cerebellar vermis | UBERON:0004720 | 77.01 | silver quality |
| inferior vagus X ganglion | UBERON:0005363 | 76.53 | gold quality |
| ventral tegmental area | UBERON:0002691 | 76.31 | silver quality |
| cardia of stomach | UBERON:0001162 | 76.22 | silver quality |
| subthalamic nucleus | UBERON:0001906 | 75.98 | gold quality |
| medial globus pallidus | UBERON:0002477 | 75.59 | silver quality |
| globus pallidus | UBERON:0001875 | 75.57 | silver quality |
| lateral globus pallidus | UBERON:0002476 | 75.45 | gold quality |
| ileal mucosa | UBERON:0000331 | 75.41 | silver quality |
| medulla oblongata | UBERON:0001896 | 75.36 | silver quality |
| blood vessel layer | UBERON:0004797 | 75.10 | silver quality |
| substantia nigra pars compacta | UBERON:0001965 | 74.91 | gold quality |
| substantia nigra pars reticulata | UBERON:0001966 | 74.88 | gold quality |
| trigeminal ganglion | UBERON:0001675 | 74.83 | silver quality |
| nipple | UBERON:0002030 | 74.74 | silver quality |
| superior surface of tongue | UBERON:0007371 | 74.55 | silver quality |
| dorsal motor nucleus of vagus nerve | UBERON:0002870 | 74.48 | silver quality |
Regulation
Is transcription factor: no
Cross-species orthologs
0 orthologs
Protein
Non-coding RNA — no protein product; not a drug target.
Function
No curated pathway, Gene-Ontology, or interaction data.
Disease & clinical
No curated disease, variant, or cancer-driver associations.
Drugs & pharmacology
No drug or pharmacology data — not an established drug target.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.