DIO2
gene geneOn this page
Also known as TXDI2SelYSELENOY
Summary
DIO2 (iodothyronine deiodinase 2, HGNC:2884) is a protein-coding gene on chromosome 14q31.1, encoding Type II iodothyronine deiodinase (Q92813). Plays a crucial role in the metabolism of thyroid hormones (TH) and has specific roles in TH activation and inactivation by deiodination.
The protein encoded by this gene belongs to the iodothyronine deiodinase family. It catalyzes the conversion of prohormone thyroxine (3,5,3’,5’-tetraiodothyronine, T4) to the bioactive thyroid hormone (3,5,3’-triiodothyronine, T3) by outer ring 5’-deiodination. This gene is widely expressed, including in thyroid and brain. It is thought to be responsible for the ’local’ production of T3, and thus important in influencing thyroid hormone action in these tissues. It has also been reported to be highly expressed in thyroids of patients with Graves disease, and in follicular adenomas. The intrathyroidal T4 to T3 conversion by this enzyme may contribute significantly to the relative increase in thyroidal T3 production in these patients. This protein is a selenoprotein containing the non-standard amino acid, selenocysteine (Sec), which is encoded by the UGA codon that normally signals translation termination. The 3’ UTRs of selenoprotein mRNAs contain a conserved stem-loop structure, designated the Sec insertion sequence (SECIS) element, that is necessary for the recognition of UGA as a Sec codon, rather than as a stop signal. Unlike the other two members (DIO1 and DIO3) of this enzyme family, the mRNA for this gene contains an additional in-frame UGA codon that has been reported (in human) to function either as a Sec or a stop codon, which can result in two isoforms with one or two Sec residues; however, only the upstream Sec (conserved with the single Sec residue found at the active site in DIO1 and DIO3) was shown to be essential for enzyme activity (PMID:10403186). Alternatively spliced transcript variants have been described for this gene.
Source: NCBI Gene 1734 — RefSeq curated summary.
At a glance
- GWAS associations: 4
- Clinical variants (ClinVar): 28 total
- Druggable target: yes
- MANE Select transcript:
NM_013989
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:2884 |
| Approved symbol | DIO2 |
| Name | iodothyronine deiodinase 2 |
| Location | 14q31.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | TXDI2, SelY, SELENOY |
| Ensembl gene | ENSG00000211448 |
| Ensembl biotype | protein_coding |
| OMIM | 601413 |
| Entrez | 1734 |
Gene structure
Transcript identifiers
Ensembl transcripts: 10 — 7 protein_coding, 2 nonsense_mediated_decay, 1 protein_coding_CDS_not_defined
ENST00000438257, ENST00000553594, ENST00000553968, ENST00000554188, ENST00000555750, ENST00000555844, ENST00000556384, ENST00000556811, ENST00000557010, ENST00000557125
RefSeq mRNA: 4 — MANE Select: NM_013989
NM_000793, NM_001324462, NM_001366496, NM_013989
CCDS: CCDS45146
Canonical transcript exons
ENST00000438257 — 2 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000000308 | 80197526 | 80203288 |
| ENSE00002032108 | 80211251 | 80211504 |
Expression profiles
Bgee: expression breadth ubiquitous, 250 present calls, max score 96.84.
FANTOM5 (CAGE): breadth broad, TPM avg 10.9361 / max 2056.8508, expressed in 579 samples.
FANTOM5 promoters (11 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 144272 | 6.2926 | 440 |
| 144266 | 3.0609 | 294 |
| 144269 | 0.6782 | 173 |
| 144267 | 0.3178 | 135 |
| 144271 | 0.2455 | 46 |
| 144270 | 0.2001 | 107 |
| 144277 | 0.0736 | 36 |
| 144268 | 0.0243 | 12 |
| 144258 | 0.0232 | 8 |
| 144257 | 0.0148 | 4 |
Top tissues by expression
283 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| pharyngeal mucosa | UBERON:0000355 | 96.84 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 96.75 | gold quality |
| tendon of biceps brachii | UBERON:0008188 | 95.78 | gold quality |
| body of tongue | UBERON:0011876 | 95.54 | gold quality |
| superior surface of tongue | UBERON:0007371 | 95.19 | gold quality |
| tongue | UBERON:0001723 | 95.02 | gold quality |
| oral cavity | UBERON:0000167 | 94.85 | gold quality |
| thyroid gland | UBERON:0002046 | 94.71 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 94.69 | gold quality |
| esophagus mucosa | UBERON:0002469 | 94.61 | gold quality |
| esophagus squamous epithelium | UBERON:0006920 | 94.47 | gold quality |
| nipple | UBERON:0002030 | 94.42 | gold quality |
| penis | UBERON:0000989 | 94.22 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 94.01 | gold quality |
| buccal mucosa cell | CL:0002336 | 92.76 | gold quality |
| epithelium of esophagus | UBERON:0001976 | 92.72 | gold quality |
| urethra | UBERON:0000057 | 91.38 | gold quality |
| squamous epithelium | UBERON:0006914 | 91.13 | gold quality |
| pituitary gland | UBERON:0000007 | 90.41 | gold quality |
| minor salivary gland | UBERON:0001830 | 90.36 | gold quality |
| mouth mucosa | UBERON:0003729 | 90.20 | gold quality |
| tongue squamous epithelium | UBERON:0006919 | 89.54 | gold quality |
| tendon | UBERON:0000043 | 88.46 | gold quality |
| adenohypophysis | UBERON:0002196 | 88.24 | gold quality |
| endometrium | UBERON:0001295 | 88.06 | gold quality |
| gingiva | UBERON:0001828 | 87.79 | gold quality |
| mammalian vulva | UBERON:0000997 | 87.64 | gold quality |
| amygdala | UBERON:0001876 | 87.53 | gold quality |
| gingival epithelium | UBERON:0001949 | 87.05 | gold quality |
| tonsil | UBERON:0002372 | 87.00 | gold quality |
Single-cell (SCXA)
Detected in 4 experiment(s), a significant marker in 4.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-HCAD-23 | yes | 1598.41 |
| E-MTAB-6701 | yes | 517.68 |
| E-MTAB-6678 | yes | 16.75 |
| E-ANND-3 | yes | 8.84 |
Regulation
Is transcription factor: yes
Downstream targets (CollecTRI)
1 targets.
| Target | Regulation |
|---|---|
| MYOD1 | Activation |
Upstream regulators (CollecTRI, top): AP1, CEBPA, CEBPB, CEBPG, CREB1, CTNNB1, FOSL2, FOXO3, GATA2, GATA4, HNF4A, JUN, MEF2A, MITF, NFATC1, NFKB, NKX2-5, NR1H3, PRDM16, RBPJ, SP1, SP3, STAT3, STAT5A, TBP, TTF1
miRNA regulators (miRDB)
224 targeting DIO2, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-190A-3P | 100.00 | 80.35 | 5520 |
| HSA-MIR-29A-3P | 100.00 | 73.11 | 1835 |
| HSA-MIR-29B-3P | 100.00 | 73.18 | 1833 |
| HSA-MIR-29C-3P | 100.00 | 73.15 | 1833 |
| HSA-MIR-3162-3P | 100.00 | 65.37 | 363 |
| HSA-MIR-6748-5P | 100.00 | 65.81 | 1057 |
| HSA-MIR-1277-5P | 100.00 | 73.95 | 5056 |
| HSA-MIR-450A-1-3P | 100.00 | 69.33 | 1837 |
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-3924 | 100.00 | 72.09 | 2394 |
| HSA-MIR-340-5P | 100.00 | 72.50 | 4437 |
| HSA-MIR-9-5P | 100.00 | 72.28 | 2361 |
| HSA-MIR-4789-3P | 99.99 | 70.75 | 2484 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-150-5P | 99.99 | 66.69 | 1976 |
| HSA-MIR-6870-5P | 99.99 | 68.55 | 2115 |
| HSA-MIR-511-3P | 99.99 | 68.85 | 1467 |
| HSA-MIR-6759-5P | 99.99 | 66.54 | 785 |
| HSA-MIR-5696 | 99.98 | 72.36 | 4487 |
| HSA-MIR-4482-3P | 99.98 | 72.50 | 3147 |
| HSA-MIR-4775 | 99.98 | 75.00 | 6394 |
| HSA-MIR-23B-5P | 99.98 | 66.07 | 587 |
| HSA-MIR-520D-5P | 99.98 | 73.34 | 4883 |
| HSA-MIR-524-5P | 99.98 | 73.43 | 4882 |
| HSA-MIR-607 | 99.97 | 73.62 | 5593 |
| HSA-MIR-1229-3P | 99.97 | 66.49 | 906 |
| HSA-MIR-4723-5P | 99.97 | 68.70 | 2034 |
| HSA-MIR-5698 | 99.97 | 68.49 | 2029 |
| HSA-MIR-7111-5P | 99.97 | 68.48 | 2062 |
Literature-anchored findings (GeneRIF, showing 40)
- Type 2 iodothyronine deiodinase expression is upregulated by the protein kinase A-dependent pathway and is downregulated by the protein kinase C-dependent pathway in cultured human thyroid cells. (PMID:11716036)
- The effects of TNF-alpha, interleukin-6 and interferon gamma were studied on the activity of type 2,5’-deiodinase and on the binding of [125I] T(4) to proteins in human thyroid cytosolic (supernatant) and membrane (pellet) fractions (PMID:11716958)
- mutants with a cysteine or serine two-residue amino terminal to the SeC are enzymatically active and displayed similar Michaelis-Menten constant values for T(4) and reverse T(3) as the wild-type D2 enzyme (PMID:11897672)
- The inhibition by D2 5’UTR is localized to a region of the first short open reading frame encoding a tripeptide-MKG (PMID:12089359)
- finding that normal pituitary tissue and pituitary adenomas expressed 5’-deiodinase activity implies that both enzymes are active in tumors and local deiodination is important for function and feedback regulation of anterior pituitary (PMID:12153750)
- Ubc6p and Ubc7p are required for normal and substrate-induced ubiquitination and proteolysis of D2 (PMID:12198238)
- overexpressed iodothyronine deiodinase types 1,2, and 3 can homodimerize probably through disulfide bridges and types 1 and 2 monomeric forms are catalytically active (PMID:12586771)
- transcription factor Pax-8 could be involved in the upregulation of DIO2 expression in the thyroid of Graves’ patients (PMID:12699588)
- Nkx-2.5 and GATA-4 play prime roles in Dio2 gene regulation in the human heart and suggests that it is their synergistic action in humans that causes the differential expression of the cardiac Dio2 gene between humans and rats. (PMID:12775767)
- D2 contains a glycoside hydrolase clan GH-A-like structure (PMID:12847093)
- In endoplasmic reticulum, degradation proceeds via an association with UBC7. (PMID:12933904)
- Iodothyronine deiodinases D2 and D3 play important roles in local bioavailability of triiodothyronine T(3). T(3) is produced from thyroxine T(4) by D2, and D3 protects brain regions from excessive T(3) until differentiation is required. (PMID:15240580)
- Variation in the DIO2 gene may affect the availability Triiodothyronine and a iodine deficiency that may partly determin and overall risk of mental retardation in china. (PMID:15286152)
- characterisation of the CRE/TATA box unit of type 2 deiodinase gene promoter in a human choriocarcinoma cell line (PMID:15291742)
- We hypothesize that this might be explained by the decline in skeletal muscle size during aging, resulting in a relative decrease in the contribution of D2 to serum T(3) production. (PMID:15727947)
- DIO1 and DIO2 were underexpressed in nearly all papillary thyroid carcinomas (PMID:15785240)
- Single nucleotide polymorphism is associated with greater insulin resistance in type 2 diabetes mellitus patients and with lower D2 velocity in tissue samples. (PMID:15797963)
- Results suggest that impairment of type 2 iodothyronine deiodinase-generated triiodothyronine (T3) is the major cause of the reduced T3 production in the euthyroid sick syndrome. (PMID:16127464)
- analysis of the pretranslational regulation of D2 [review] (PMID:16131328)
- D2 expression is increased by BPS and suppressed by PDGF in hCASMCs, and that intracellular thyroid hormone activation may be involved in the suppression of DNA synthesis and migration activity of hCASMCs. (PMID:16140305)
- results indicate that inflammatory signals regulate iodothyronine deiodinase type II expression predominantly via the nuclear factor-kappa B pathway in a direct transcriptional manner (PMID:16728495)
- analysis of a human type-2 deiodinase polymorphism (PMID:16889485)
- the instability loop in D2, but not its subcellular localization, is the key determinant of D2 susceptibility to ubiquitination and rapid turnover rate (PMID:16928685)
- DIO2 variants were not associated with serum thyroid parameters in the elderly (PMID:17105838)
- The Ala92 allele of the type 2 iodothyronine deiodinase increases risk for the development of hypertension. (PMID:17224473)
- Increased thyroidal D2 activity in the thyroid gland is responsible for the higher serum-free levels in patients with defective thyroglobin transport. (PMID:17244789)
- there is no association of the DIO2 A/G polymorphism with diabetes intermediate trait levels or DM2 risk (PMID:17381351)
- Ubiquitination can also regulate proteins by transiently inactivating enzymatic function through conformational change in a dimeric enzyme, which can be reversed upon deubiquitination. (PMID:17452445)
- reduced D2 activity does not play a role in the pathogenesis of the low triiodothyronine syndrome of critical illness (PMID:17504898)
- EGF modulates transcription of human type II deiodinase gene (Dio2) through distinct signaling pathways, leading to the assembly of a heterogeneous transcription factor complex (PMID:17991726)
- D2 Thr92Ala polymorphism seems to predict the need for higher T4 intake in thyroidectomized patients. (PMID:18073314)
- There is a combined effect of DIO2 T92A and PPARgamma2 P12A polymorphisms on insulin resistance-related features in non-diabetic whites. (PMID:18198294)
- Results indicate a new susceptibility gene (DIO2) conferring risk to osteoarthritis. (PMID:18334578)
- The role of type 1 and type 2 5’-deiodinase in the pathophysiology of the 3,5,3’-triiodothyronine toxicosis of McCune-Albright syndrome. (PMID:18349068)
- D2 is highly expressed in human medullary thyroid carcinoma (PMID:18514391)
- The D2-Thr92Ala polymorphism is not associated with blood thyroid hormone levels. (PMID:19018782)
- The D2-Thr92Ala, D2-ORFa-Gly3Asp and TSHR-Asp727Glu polymorphisms were not associated with blood pressure or the risk of hypertension. (PMID:19178511)
- commonly inherited variation in the DIO2 gene is associated both with impaired baseline psychological well-being on thryoxine and enhanced response to combination triiodothyronine therapy (PMID:19190113)
- Human skeletal muscle D2 mRNA expression is modulated by fasting and insulin, but not by hypothyroidism. (PMID:19293265)
- Genetic variations of type II deiodinase are associated with bipolar disorder in a subset of a Chinese Han population. (PMID:19427350)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | dio2 | ENSDARG00000094857 |
| mus_musculus | Dio2 | ENSMUSG00000007682 |
| rattus_norvegicus | Dio2 | ENSRNOG00000062383 |
Paralogs (2): DIO3 (ENSG00000197406), DIO1 (ENSG00000211452)
Protein
Protein identifiers
Type II iodothyronine deiodinase — Q92813 (reviewed: Q92813)
Alternative names: 5DII, DIOII, Type 2 DI, Type-II 5’-deiodinase
All UniProt accessions (6): A0A024R6J8, Q92813, G3V2A7, G3V3A8, H0YJ42, H0YJQ8
UniProt curated annotations — full annotation on UniProt →
Function. Plays a crucial role in the metabolism of thyroid hormones (TH) and has specific roles in TH activation and inactivation by deiodination. Catalyzes the deiodination of L-thyroxine (T4) to 3,5,3’-triiodothyronine (T3), 3,3’,5’-triiodothyronine (rT3) to 3,3’-diiodothyronine (3,3’-T2) and 3’,5’-diiodothyronine (3’,5’-T2) to 3’-monoiodothyronine (3’-T1) via outer-ring deiodination (ORD). Catalyzes the phenolic ring deiodinations of 3,3’,5’-triiodothyronamine and 3’,5’- diiodothyronamine.
Subunit / interactions. Predominantly monomer. Can form homodimers but homodimerization is not essential for enzyme activity. Interacts with USP20 and USP33. Interacts with MARCHF6.
Subcellular location. Endoplasmic reticulum membrane.
Tissue specificity. Isoform 1 is expressed in the lung, trachea, kidney, heart, skeletal muscle, placenta, fetal brain and several regions of the adult brain. Isoform 2 is expressed in the brain, heart, kidney and trachea.
Post-translational modifications. Ubiquitinated by MARCHF6, leading to its degradation by the proteasome. Deubiquitinated by USP20 and USP33.
Miscellaneous. Has a Sec in positions 90, 169 and 302. Has a Sec in position 37.
Similarity. Belongs to the iodothyronine deiodinase family.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q92813-1 | 1, hDII-a | yes |
| Q92813-2 | 2, hDII-b | |
| Q92813-3 | 3, hDII-c |
RefSeq proteins (4): NP_000784, NP_001311391, NP_001353425, NP_054644* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000643 | Iodothyronine_deiodinase | Family |
| IPR008261 | Iodothyronine_deiodinase_AS | Active_site |
| IPR036249 | Thioredoxin-like_sf | Homologous_superfamily |
Pfam: PF00837
Enzyme classification (BRENDA):
- EC 1.21.99.4 — thyroxine 5’-deiodinase (BRENDA: 17 organisms, 66 substrates, 73 inhibitors, 76 Km, 3 kcat entries)
Substrate kinetics (BRENDA)
10 substrates with measured Km, best-characterized 10. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| 3,3’,5’-TRIIODOTHYRONINE | 0.0067–2.7 | 25 |
| L-THYROXINE | — | 20 |
| 3,3’,5-TRIIODO-L-THYRONINE SULFATE | 0.0015–0.0045 | 11 |
| REVERSE TRIIODOTHYRONINE | — | 5 |
| 3,3’,5-TRIIODOTHYRONINE | 0.0026–0.005 | 2 |
| L-3,5’,3’-TRIIODOTHYRONINE | 0.003–0.57 | 2 |
| THYROXINE | — | 2 |
| 3,3’,5’-TRIIODO-L-THYRONINE | 0.02 | 1 |
| 3,5’-DIIODO-L-THYRONINE | 0.01 | 1 |
| SULFATED REVERSE TRIIODOTHYRONINE | 0.0007 | 1 |
Catalyzed reactions (Rhea), 5 shown:
- 3,3’,5-triiodo-L-thyronine + iodide + A + H(+) = L-thyroxine + AH2 (RHEA:19745)
- 3,3’-diiodo-L-thyronine + iodide + A + H(+) = 3,3’,5’-triiodo-L-thyronine + AH2 (RHEA:82575)
- 3’-iodo-L-thyronine + iodide + A + H(+) = 3’,5’-diiodo-L-thyronine + AH2 (RHEA:82899)
- 3,3’-diiodothyronamine + iodide + A + H(+) = 3,3’,5’-triiodothyronamine + AH2 (RHEA:83795)
- 3’-iodothyronamine + iodide + A + H(+) = 3’,5’-diiodothyronamine + AH2 (RHEA:83803)
UniProt features (17 total): splice variant 4, mutagenesis site 3, topological domain 2, sequence variant 2, non-standard amino acid 2, chain 1, sequence conflict 1, transmembrane region 1, active site 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
No AlphaFold model available for Q92813 — AlphaFold DB does not currently provide models for proteins above ~3000 aa.
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 133
Mutagenesis-validated functional residues (3):
| Position | Phenotype |
|---|---|
| 133 | complete loss of enzyme activity towards l-thyroxine. |
| 133 | 1000-fold increase of km and vmax value for l-thyroxine. |
| 266 | no effect on enzyme activity towards l-thyroxine. |
Function
Pathways and Gene Ontology
Reactome pathways
9 pathways
| ID | Pathway |
|---|---|
| R-HSA-350864 | Regulation of thyroid hormone activity |
| R-HSA-9844594 | Transcriptional regulation of brown and beige adipocyte differentiation by EBF2 |
| R-HSA-1266738 | Developmental Biology |
| R-HSA-1430728 | Metabolism |
| R-HSA-209776 | Metabolism of amine-derived hormones |
| R-HSA-209968 | Thyroxine biosynthesis |
| R-HSA-71291 | Metabolism of amino acids and derivatives |
| R-HSA-9843743 | Transcriptional regulation of brown and beige adipocyte differentiation |
| R-HSA-9843745 | Adipogenesis |
MSigDB gene sets: 257 (showing top):
ATF_B, TGGTGCT_MIR29A_MIR29B_MIR29C, GOBP_PHENOL_CONTAINING_COMPOUND_METABOLIC_PROCESS, TSUNODA_CISPLATIN_RESISTANCE_UP, AAGCAAT_MIR137, JAEGER_METASTASIS_DN, AREB6_03, GOBP_MODIFIED_AMINO_ACID_CATABOLIC_PROCESS, GOBP_REGULATION_OF_HORMONE_LEVELS, GCAAGGA_MIR502, GOBP_THYROID_HORMONE_METABOLIC_PROCESS, BRUECKNER_TARGETS_OF_MIRLET7A3_DN, GOBP_TRANSLATION, PAX8_B, GOBP_POST_TRANSCRIPTIONAL_REGULATION_OF_GENE_EXPRESSION
GO Biological Process (7): selenocysteine incorporation (GO:0001514), thyroid hormone generation (GO:0006590), response to lipopolysaccharide (GO:0032496), thyroid hormone metabolic process (GO:0042403), thyroid hormone catabolic process (GO:0042404), hormone biosynthetic process (GO:0042446), positive regulation of cold-induced thermogenesis (GO:0120162)
GO Molecular Function (5): thyroxine 5’-deiodinase activity (GO:0004800), selenium binding (GO:0008430), ubiquitin protein ligase binding (GO:0031625), thyroxine 5-deiodinase activity (GO:0033798), oxidoreductase activity (GO:0016491)
GO Cellular Component (5): endoplasmic reticulum membrane (GO:0005789), plasma membrane (GO:0005886), membrane (GO:0016020), endoplasmic reticulum (GO:0005783), endomembrane system (GO:0012505)
Reactome top-level categories
Rollup of top-7 pathways:
| Category | Pathways |
|---|---|
| Thyroxine biosynthesis | 1 |
| Transcriptional regulation of brown and beige adipocyte differentiation | 1 |
| Metabolism of amino acids and derivatives | 1 |
| Metabolism of amine-derived hormones | 1 |
| Metabolism | 1 |
| Adipogenesis | 1 |
| Developmental Biology | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| thyroid hormone metabolic process | 2 |
| hormone metabolic process | 2 |
| oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond | 2 |
| cellular anatomical structure | 2 |
| translational readthrough | 1 |
| response to molecule of bacterial origin | 1 |
| response to lipid | 1 |
| response to oxygen-containing compound | 1 |
| modified amino acid metabolic process | 1 |
| phenol-containing compound metabolic process | 1 |
| phenol-containing compound catabolic process | 1 |
| modified amino acid catabolic process | 1 |
| hormone catabolic process | 1 |
| biosynthetic process | 1 |
| positive regulation of multicellular organismal process | 1 |
| cold-induced thermogenesis | 1 |
| regulation of cold-induced thermogenesis | 1 |
| small molecule binding | 1 |
| ubiquitin-like protein ligase binding | 1 |
| catalytic activity | 1 |
| organelle membrane | 1 |
| nuclear outer membrane-endoplasmic reticulum membrane network | 1 |
| endoplasmic reticulum subcompartment | 1 |
| membrane | 1 |
| cell periphery | 1 |
| cytoplasm | 1 |
| endomembrane system | 1 |
| intracellular membrane-bounded organelle | 1 |
| vacuole | 1 |
| plasma membrane | 1 |
Protein interactions and networks
STRING
1226 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| DIO2 | SECISBP2 | Q96T21 | 916 |
| DIO2 | SLC16A2 | P36021 | 894 |
| DIO2 | TRH | P20396 | 846 |
| DIO2 | UCP1 | P25874 | 845 |
| DIO2 | GPBAR1 | Q8TDU6 | 834 |
| DIO2 | CIDEA | O60543 | 808 |
| DIO2 | SLCO1C1 | Q9NYB5 | 794 |
| DIO2 | TSHB | P01222 | 787 |
| DIO2 | TSHR | P16473 | 781 |
| DIO2 | PRDM16 | Q9HAZ2 | 778 |
| DIO2 | THRB | P10828 | 774 |
| DIO2 | TG | P01266 | 748 |
| DIO2 | PPARGC1A | Q9UBK2 | 733 |
| DIO2 | ELOVL3 | Q9HB03 | 722 |
| DIO2 | TXNRD2 | Q9NNW7 | 691 |
IntAct
0 interactions, top by confidence:
BioGRID (29): DIO2 (Biochemical Activity), DIO2 (Affinity Capture-RNA), USP33 (Reconstituted Complex), DIO2 (Affinity Capture-Western), DIO2 (Affinity Capture-Western), TOMM22 (Co-fractionation), DIO2 (Co-fractionation), USP33 (Two-hybrid), DIO2 (Affinity Capture-Western), DIO2 (FRET), UBE2G1 (FRET), WSB1 (FRET), USP33 (FRET), TCEB2 (Affinity Capture-Western), CUL5 (Affinity Capture-Western)
ESM2 similar proteins: A4GT88, A7YD35, O02734, O14349, O42411, O42412, O42449, O95822, P09543, P12617, P13233, P13807, P13834, P24389, P49894, P49895, P49896, P49897, P49898, P49899, P51639, P54310, P55073, P70551, P79747, P97564, Q07071, Q0P4Y1, Q2QEI3, Q5I3B1, Q5I3B2, Q5R9H0, Q5RFD0, Q61153, Q6DN07, Q6QN11, Q6QN12, Q6QN13, Q6U6H1, Q6V915
Diamond homologs: A4GT88, A7YD35, L7WGA7, O42411, O42412, O42449, P24389, P49894, P49895, P49896, P49897, P49898, P49899, P55073, P70551, P79747, Q2QEI3, Q5I3B1, Q5I3B2, Q61153, Q6DN07, Q6QN11, Q6QN12, Q6QN13, Q6U6H1, Q6V915, Q804E1, Q8UVX8, Q91ZI8, Q92813, Q95N00, Q9IAX2, Q9Z1Y9
SIGNOR signaling
9 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| DIO2 | “up-regulates quantity by expression” | MYOD1 | “transcriptional regulation” |
| DIO2 | “down-regulates quantity” | L-thyroxine | “chemical modification” |
| DIO2 | “up-regulates quantity” | iodide | “chemical modification” |
| “3’,5’-cyclic AMP” | “up-regulates quantity by expression” | DIO2 | |
| UBE2J1 | “down-regulates quantity by destabilization” | DIO2 | ubiquitination |
| UBE2G2 | “down-regulates quantity by destabilization” | DIO2 | ubiquitination |
| FOXO3 | “up-regulates quantity by expression” | DIO2 | “transcriptional regulation” |
Disease & clinical
Clinical variants and AI predictions
ClinVar
28 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 21 |
| Likely benign | 1 |
| Benign | 2 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
457 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 14:80211247:TCA:T | donor_loss | 1.0000 |
| 14:80211248:CACCT:C | donor_loss | 1.0000 |
| 14:80211249:A:AC | donor_gain | 1.0000 |
| 14:80211249:A:AT | donor_loss | 1.0000 |
| 14:80211250:C:CC | donor_gain | 1.0000 |
| 14:80211250:CCT:C | donor_gain | 0.9900 |
| 14:80211250:CCTG:C | donor_gain | 0.9900 |
| 14:80211250:CCTGT:C | donor_gain | 0.9900 |
| 14:80203287:ACC:A | acceptor_loss | 0.9800 |
| 14:80203288:CCTGA:C | acceptor_loss | 0.9800 |
| 14:80203289:C:CA | acceptor_loss | 0.9800 |
| 14:80203289:C:CC | acceptor_gain | 0.9800 |
| 14:80203290:T:A | acceptor_loss | 0.9800 |
| 14:80203293:CGG:C | acceptor_gain | 0.9800 |
| 14:80203294:G:T | acceptor_gain | 0.9800 |
| 14:80203295:G:C | acceptor_gain | 0.9800 |
| 14:80203295:G:GC | acceptor_gain | 0.9800 |
| 14:80211249:AC:A | donor_gain | 0.9800 |
| 14:80211250:CC:C | donor_gain | 0.9800 |
| 14:80203284:TTCAC:T | acceptor_gain | 0.9700 |
| 14:80203285:TCAC:T | acceptor_gain | 0.9700 |
| 14:80203286:CAC:C | acceptor_gain | 0.9700 |
| 14:80203286:CACC:C | acceptor_gain | 0.9700 |
| 14:80203287:AC:A | acceptor_gain | 0.9700 |
| 14:80203288:CC:C | acceptor_gain | 0.9700 |
| 14:80208806:TGAAG:T | donor_gain | 0.9700 |
| 14:80211240:G:C | donor_gain | 0.9600 |
| 14:80202327:C:A | donor_gain | 0.9500 |
| 14:80206493:T:TA | donor_gain | 0.9500 |
| 14:80199418:CCAA:C | acceptor_gain | 0.9400 |
AlphaMissense
0 scored. Top likely-pathogenic:
dbSNP variants (sampled 300 via entrez): RS1000006287 (14:80231295 C>G), RS1000071624 (14:80218153 A>G), RS1000093203 (14:80204520 C>G), RS1000119649 (14:80221820 G>A), RS1000316799 (14:80210795 T>C), RS1000375757 (14:80215301 A>G), RS1000404287 (14:80222080 C>A), RS1000455005 (14:80223664 C>T), RS1000675537 (14:80228500 C>T), RS1000713327 (14:80216227 G>A,C), RS1000728637 (14:80224076 C>A,T), RS1000746489 (14:80215126 C>T), RS1001021224 (14:80229525 C>A,T), RS1001057751 (14:80209565 A>T), RS1001160489 (14:80202276 T>A,C)
Disease associations
OMIM: gene MIM:601413 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
4 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST005352_26 | Paclitaxel disposition in epithelial ovarian cancer | 5.000000e-06 |
| GCST005790_31 | Rosacea symptom severity | 4.000000e-09 |
| GCST006896_12 | Free thyroxine concentration | 5.000000e-17 |
| GCST009391_887 | Metabolite levels | 8.000000e-06 |
EFO canonical traits (2, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0009180 | rosacea severity measurement |
| EFO:0010439 | triacylglycerol 58:12 measurement |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL3542431 (PROTEIN FAMILY)
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB variants
2 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs225014 | DIO2 | 0.00 | 0 | ||
| rs12885300 | DIO2 | 0.00 | 0 |
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — Thyroid hormone turnover
CTD chemical–gene interactions
127 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Thyroxine | decreases activity, decreases expression, decreases reaction, increases chemical synthesis, increases metabolic processing (+1 more) | 5 |
| Estradiol | affects cotreatment, decreases expression, increases expression | 4 |
| bisphenol A | decreases expression, increases methylation, affects cotreatment, increases expression | 3 |
| benzyloxycarbonylleucyl-leucyl-leucine aldehyde | increases expression, affects cotreatment, increases reaction, decreases activity, decreases reaction (+2 more) | 3 |
| Triiodothyronine | increases reaction, decreases reaction, increases chemical synthesis, increases metabolic processing, affects abundance (+3 more) | 3 |
| 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide | decreases expression, increases expression | 3 |
| Particulate Matter | increases abundance, increases expression, decreases expression | 3 |
| decabromobiphenyl ether | increases ubiquitination, decreases reaction, increases degradation, increases reaction, decreases expression (+4 more) | 2 |
| sodium arsenite | decreases expression | 2 |
| xanthohumol | decreases activity, affects metabolic processing | 2 |
| 2,2’,4,4’,5-brominated diphenyl ether | decreases reaction, increases chemical synthesis, increases metabolic processing, decreases activity, increases degradation (+3 more) | 2 |
| Resveratrol | affects cotreatment, decreases expression, decreases activity | 2 |
| Benzo(a)pyrene | decreases expression, increases methylation | 2 |
| Cycloheximide | decreases activity, decreases reaction, affects cotreatment, increases reaction | 2 |
| Lipopolysaccharides | increases expression, increases reaction, increases activity, affects response to substance, affects cotreatment (+1 more) | 2 |
| Progesterone | affects cotreatment, decreases expression | 2 |
| Aflatoxin B1 | decreases expression, decreases methylation | 2 |
| Medroxyprogesterone Acetate | affects cotreatment, decreases expression | 2 |
| bisphenol F | increases expression, affects cotreatment | 1 |
| 4,5-dichloro-1,2-dithiol-3-one | decreases activity | 1 |
| sotorasib | affects cotreatment, increases expression | 1 |
| captafol | decreases activity | 1 |
| tetrachloroisophthalonitrile | decreases activity | 1 |
| kaempferol | increases expression, increases abundance, increases activity, increases reaction | 1 |
| chrysophenine | decreases activity | 1 |
| dichlone | decreases activity | 1 |
| dinocap | decreases activity | 1 |
| sodium arsenate | decreases expression, increases abundance | 1 |
| dodecyldimethylamine oxide | decreases expression | 1 |
| hexachlorocyclopentadiene | decreases activity | 1 |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.