DLGAP1-AS5

Summary

DLGAP1-AS5 (DLGAP1 antisense RNA 5, HGNC:27586) is a long non-coding RNA gene on chromosome 18p11.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:27586
Approved symbol	DLGAP1-AS5
Name	DLGAP1 antisense RNA 5
Location	18p11.31
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000261520
Ensembl biotype	lncRNA
Entrez	284215
RNAcentral	URS000075E133 — lncRNA, 3220 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000565759, ENST00000565811, ENST00000565979, ENST00000568986, ENST00000833350

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000565759 — 3 exons

Exon	Start	End
ENSE00002577041	4264602	4264901
ENSE00002597912	4280730	4280766
ENSE00002604662	4293160	4293365

Expression profiles

Bgee: expression breadth ubiquitous, 106 present calls, max score 86.94.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1144 / max 68.0623, expressed in 21 samples.

FANTOM5 promoters (4 alternative TSS)

Promoter ID	TPM avg	Samples expressed
169239	0.0510	6
169238	0.0303	5
169237	0.0226	6
169236	0.0104	7

Top tissues by expression

106 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.94	gold quality
tonsil	UBERON:0002372	82.08	gold quality
sural nerve	UBERON:0015488	79.46	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	74.58	gold quality
corpus callosum	UBERON:0002336	73.98	gold quality
saliva-secreting gland	UBERON:0001044	73.19	gold quality
liver	UBERON:0002107	71.81	silver quality
minor salivary gland	UBERON:0001830	71.04	gold quality
ganglionic eminence	UBERON:0004023	67.99	gold quality
amygdala	UBERON:0001876	64.38	gold quality
gall bladder	UBERON:0002110	64.35	gold quality
anterior cingulate cortex	UBERON:0009835	63.31	gold quality
calcaneal tendon	UBERON:0003701	63.06	gold quality
Ammon’s horn	UBERON:0001954	62.16	gold quality
primary visual cortex	UBERON:0002436	61.53	gold quality
nucleus accumbens	UBERON:0001882	60.52	gold quality
putamen	UBERON:0001874	60.16	gold quality
substantia nigra	UBERON:0002038	59.88	gold quality
caudate nucleus	UBERON:0001873	59.67	gold quality
duodenum	UBERON:0002114	59.36	gold quality
hindlimb stylopod muscle	UBERON:0004252	59.26	silver quality
brain	UBERON:0000955	58.24	gold quality
cerebral cortex	UBERON:0000956	57.73	gold quality
hypothalamus	UBERON:0001898	57.01	gold quality
prefrontal cortex	UBERON:0000451	56.60	gold quality
cerebellum	UBERON:0002037	56.34	gold quality
cerebellar cortex	UBERON:0002129	56.29	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	56.28	gold quality
cerebellar hemisphere	UBERON:0002245	56.20	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	56.17	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.58

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.