DMAP1
gene geneOn this page
Also known as DNMAP1FLJ11543KIAA1425DNMTAP1EAF2MEAF2SWC4
Summary
DMAP1 (DNA methyltransferase 1 associated protein 1, HGNC:18291) is a protein-coding gene on chromosome 1p34.1, encoding DNA methyltransferase 1-associated protein 1 (Q9NPF5). Involved in transcription repression and activation.
This gene encodes a subunit of several, distinct complexes involved in the repression or activation of transcription. The encoded protein can independently repress transcription and is targeted to replication foci throughout S phase by interacting directly with the N-terminus of DNA methyltransferase 1. During late S phase, histone deacetylase 2 is added to this complex, providing a means to deacetylate histones in transcriptionally inactive heterochromatin following replication. The encoded protein is also a component of the nucleosome acetyltransferase of H4 complex and interacts with the transcriptional corepressor tumor susceptibility gene 101 and the pro-apoptotic death-associated protein 6, among others. Alternatively spliced transcript variants encoding the same protein have been described.
Source: NCBI Gene 55929 — RefSeq curated summary.
At a glance
- Gene–disease (curated): neurodevelopmental disorder (Strong, GenCC)
- GWAS associations: 2
- Clinical variants (ClinVar): 111 total — 2 likely-pathogenic
- GTEx eGene: eQTL in 30 tissues, sQTL in 1 (q < 0.05)
- Constraint (gnomAD): pLI 0.00 (LoF-tolerant), LOEUF 0.69 (unconstrained)
- MANE Select transcript:
NM_019100
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:18291 |
| Approved symbol | DMAP1 |
| Name | DNA methyltransferase 1 associated protein 1 |
| Location | 1p34.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | DNMAP1, FLJ11543, KIAA1425, DNMTAP1, EAF2, MEAF2, SWC4 |
| Ensembl gene | ENSG00000178028 |
| Ensembl biotype | protein_coding |
| OMIM | 605077 |
| Entrez | 55929 |
Gene structure
Transcript identifiers
Ensembl transcripts: 26 — 16 protein_coding, 7 protein_coding_CDS_not_defined, 3 nonsense_mediated_decay
MANE Select: ENST00000372289
Transcript support level (Ensembl TSL; 1 = fully mRNA-supported): TSL 1: 4, TSL 2: 2, TSL 3: 8, TSL 5: 1
ENST00000372289, ENST00000315913, ENST00000361745, ENST00000372290, ENST00000436069, ENST00000437511, ENST00000440641, ENST00000446292, ENST00000463950, ENST00000471829, ENST00000475794, ENST00000483741, ENST00000487922, ENST00000488433, ENST00000494092, ENST00000891874, ENST00000891875, ENST00000891876, ENST00000924540, ENST00000942392, ENST00000942393, ENST00001049198, ENST00001049199, ENST00001049200, ENST00001124050, ENST00001141806
RefSeq mRNA: 3 — MANE Select: NM_019100
NM_001034023, NM_001034024, NM_019100
CCDS: CCDS509
Canonical transcript exons
ENST00000372289 — 10 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001235437 | 44218311 | 44218469 |
| ENSE00001457447 | 44213471 | 44213858 |
| ENSE00003539633 | 44220017 | 44220309 |
| ENSE00003583235 | 44214350 | 44214441 |
| ENSE00003604123 | 44219806 | 44219878 |
| ENSE00003680157 | 44218588 | 44218755 |
| ENSE00003683913 | 44214703 | 44214898 |
| ENSE00003692513 | 44219406 | 44219477 |
| ENSE00003790675 | 44219056 | 44219241 |
| ENSE00003849289 | 44220559 | 44220673 |
Expression profiles
Bgee: expression breadth ubiquitous, 224 present calls, max score 95.71.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 10.1410 / max 54.2742, expressed in 1780 samples.
Highest expression (Bgee): adrenal gland cortex, adrenal gland, uterine tube, granulocyte, hemisphere of cerebellum.
Genetic regulation across tissues (GTEx eQTL / sQTL)
DMAP1 is an eGene in GTEx v10 — its expression is genetically regulated (eQTL) in 30 tissues and its splicing (sQTL) in 1 (q < 0.05). Strongest associations first; slope = normalized effect of the lead variant’s alternative allele.
showing 20 of 31 significant tissue × QTL associations:
| Tissue | QTL | q-value | Slope | Lead variant |
|---|---|---|---|---|
| Muscle Skeletal | eqtl | 3.7e-63 | +0.46 | 1:44220650:T:C |
| Thyroid | eqtl | 2.6e-11 | +0.20 | 1:44215047:G:C |
| Cells Cultured fibroblasts | eqtl | 2.6e-11 | +0.22 | 1:44256067:G:A |
| Pancreas | eqtl | 6.5e-11 | +0.25 | 1:44251980:C:T |
| Heart Atrial Appendage | eqtl | 2.9e-09 | +0.21 | 1:44354576:G:A |
| Esophagus Mucosa | eqtl | 2.0e-05 | +0.14 | 1:44241623:G:C |
| Artery Tibial | eqtl | 3.0e-05 | -0.15 | 1:44220650:T:C |
| Testis | eqtl | 8.2e-05 | +0.16 | 1:44076324:C:T |
| Colon Sigmoid | eqtl | 2.2e-04 | -0.15 | 1:44143000:C:T |
| Artery Aorta | eqtl | 2.7e-04 | -0.23 | 1:44299974:C:T |
| Nerve Tibial | eqtl | 3.6e-04 | +0.12 | 1:44130707:CCAA:C |
| Skin Sun Exposed Lower leg | eqtl | 4.6e-04 | +0.12 | 1:44234176:T:G |
| Pituitary | eqtl | 4.6e-04 | +0.21 | 1:44215047:G:C |
| Brain Hippocampus | eqtl | 5.8e-04 | -0.43 | 1:44192008:C:T |
| Brain Anterior cingulate cortex BA24 | eqtl | 6.2e-04 | +0.30 | 1:44220650:T:C |
| Colon Transverse | eqtl | 7.8e-04 | +0.10 | 1:44199828:A:G |
| Brain Frontal Cortex BA9 | eqtl | 9.2e-04 | +0.22 | 1:44131541:G:A |
| Lung | eqtl | 2.0e-03 | +0.10 | 1:44200673:C:T |
| Brain Cortex | eqtl | 2.1e-03 | +0.26 | 1:44215047:G:C |
| Adipose Subcutaneous | eqtl | 3.2e-03 | -0.41 | 1:44693537:C:T |
FANTOM5 promoters
3 alternative TSS:
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 2596 | 7.1959 | 1752 |
| 2597 | 2.0402 | 1284 |
| 2598 | 0.9048 | 479 |
Top tissues by expression
showing 100 of 253 tissues by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right adrenal gland cortex | UBERON:0035827 | 95.71 | gold quality |
| right adrenal gland | UBERON:0001233 | 95.64 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 95.13 | gold quality |
| left adrenal gland | UBERON:0001234 | 95.08 | gold quality |
| right uterine tube | UBERON:0001302 | 94.27 | gold quality |
| adrenal gland | UBERON:0002369 | 94.18 | gold quality |
| granulocyte | CL:0000094 | 94.09 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 93.98 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 93.79 | gold quality |
| adrenal cortex | UBERON:0001235 | 93.68 | gold quality |
| cerebellar cortex | UBERON:0002129 | 93.64 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 93.40 | gold quality |
| right frontal lobe | UBERON:0002810 | 93.38 | gold quality |
| adenohypophysis | UBERON:0002196 | 93.35 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 93.28 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 93.26 | gold quality |
| body of pancreas | UBERON:0001150 | 93.19 | gold quality |
| adrenal tissue | UBERON:0018303 | 93.12 | gold quality |
| left ovary | UBERON:0002119 | 92.97 | gold quality |
| right ovary | UBERON:0002118 | 92.96 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 92.78 | gold quality |
| embryo | UBERON:0000922 | 92.63 | gold quality |
| ganglionic eminence | UBERON:0004023 | 92.63 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 92.59 | gold quality |
| endocervix | UBERON:0000458 | 92.55 | gold quality |
| prefrontal cortex | UBERON:0000451 | 92.37 | gold quality |
| cerebellum | UBERON:0002037 | 92.29 | gold quality |
| sural nerve | UBERON:0015488 | 92.24 | gold quality |
| apex of heart | UBERON:0002098 | 92.21 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 92.04 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 92.00 | gold quality |
| pituitary gland | UBERON:0000007 | 91.98 | gold quality |
| metanephros cortex | UBERON:0010533 | 91.88 | gold quality |
| ventricular zone | UBERON:0003053 | 91.83 | gold quality |
| body of uterus | UBERON:0009853 | 91.83 | gold quality |
| ectocervix | UBERON:0012249 | 91.74 | gold quality |
| cortical plate | UBERON:0005343 | 91.73 | gold quality |
| spleen | UBERON:0002106 | 91.70 | gold quality |
| body of stomach | UBERON:0001161 | 91.66 | gold quality |
| caudate nucleus | UBERON:0001873 | 91.63 | gold quality |
| thyroid gland | UBERON:0002046 | 91.47 | gold quality |
| tibial nerve | UBERON:0001323 | 91.45 | gold quality |
| minor salivary gland | UBERON:0001830 | 91.39 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 91.38 | gold quality |
| transverse colon | UBERON:0001157 | 91.36 | gold quality |
| right lobe of liver | UBERON:0001114 | 91.35 | gold quality |
| left testis | UBERON:0004533 | 91.35 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 91.31 | gold quality |
| right testis | UBERON:0004534 | 91.28 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 90.96 | gold quality |
| descending thoracic aorta | UBERON:0002345 | 90.90 | gold quality |
| skin of abdomen | UBERON:0001416 | 90.88 | gold quality |
| amygdala | UBERON:0001876 | 90.75 | gold quality |
| left uterine tube | UBERON:0001303 | 90.73 | gold quality |
| hypothalamus | UBERON:0001898 | 90.73 | gold quality |
| popliteal artery | UBERON:0002250 | 90.73 | gold quality |
| tibial artery | UBERON:0007610 | 90.73 | gold quality |
| skin of leg | UBERON:0001511 | 90.65 | gold quality |
| gastrocnemius | UBERON:0001388 | 90.64 | gold quality |
| ascending aorta | UBERON:0001496 | 90.63 | gold quality |
| thoracic aorta | UBERON:0001515 | 90.62 | gold quality |
| muscle of leg | UBERON:0001383 | 90.60 | gold quality |
| putamen | UBERON:0001874 | 90.59 | gold quality |
| aorta | UBERON:0000947 | 90.54 | gold quality |
| mucosa of stomach | UBERON:0001199 | 90.51 | gold quality |
| pancreas | UBERON:0001264 | 90.50 | gold quality |
| nucleus accumbens | UBERON:0001882 | 90.49 | gold quality |
| small intestine | UBERON:0002108 | 90.44 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 90.39 | gold quality |
| left coronary artery | UBERON:0001626 | 90.38 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 90.38 | gold quality |
| monocyte | CL:0000576 | 90.34 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 90.22 | gold quality |
| leukocyte | CL:0000738 | 90.21 | gold quality |
| neocortex | UBERON:0001950 | 90.21 | gold quality |
| right atrium auricular region | UBERON:0006631 | 90.11 | gold quality |
| stromal cell of endometrium | CL:0002255 | 90.09 | gold quality |
| metanephros | UBERON:0000081 | 89.97 | gold quality |
| lower esophagus | UBERON:0013473 | 89.91 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 89.91 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 89.81 | gold quality |
| right lung | UBERON:0002167 | 89.79 | gold quality |
| saliva-secreting gland | UBERON:0001044 | 89.78 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 89.76 | gold quality |
| vermiform appendix | UBERON:0001154 | 89.75 | gold quality |
| frontal cortex | UBERON:0001870 | 89.73 | gold quality |
| rectum | UBERON:0001052 | 89.58 | gold quality |
| stomach | UBERON:0000945 | 89.54 | gold quality |
| right coronary artery | UBERON:0001625 | 89.48 | gold quality |
| gall bladder | UBERON:0002110 | 89.45 | gold quality |
| testis | UBERON:0000473 | 89.34 | gold quality |
| heart left ventricle | UBERON:0002084 | 89.14 | gold quality |
| coronary artery | UBERON:0001621 | 89.02 | gold quality |
| ovary | UBERON:0000992 | 88.99 | gold quality |
| esophagus | UBERON:0001043 | 88.95 | gold quality |
| spinal cord | UBERON:0002240 | 88.92 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 88.90 | gold quality |
| cardiac atrium | UBERON:0002081 | 88.85 | gold quality |
| islet of Langerhans | UBERON:0000006 | 88.83 | gold quality |
| forebrain | UBERON:0001890 | 88.79 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 5.52 |
HPA expression
RNA tissue specificity: Tissue enhanced
showing 60 of 155 HPA tissues / cells by nTPM:
| Tissue / cell | Axis | nTPM | Protein (IHC) |
|---|---|---|---|
| Bone marrow | tissue | 67.8 | medium |
| Lymph node | tissue | 50.0 | medium |
| Tonsil | tissue | 40.6 | high |
| Skeletal muscle | tissue | 32.6 | medium |
| Adrenal gland | tissue | 29.1 | high |
| Kidney | tissue | 28.1 | low |
| Pituitary gland | tissue | 24.8 | |
| Parathyroid gland | tissue | 23.9 | medium |
| Tongue | tissue | 23.5 | |
| Nucleus accumbens | tissue | 23.2 | |
| Hippocampus | tissue | 23.1 | high |
| Postcentral gyrus | tissue | 22.8 | |
| Choroid plexus | tissue | 20.9 | |
| Ovary | tissue | 20.6 | medium |
| Salivary gland | tissue | 20.1 | high |
| Heart muscle | tissue | 20.0 | low |
| Caudate putamen | tissue | 20.0 | |
| Prostate | tissue | 19.7 | not detected |
| Frontal cortex | tissue | 19.6 | |
| Thymus | tissue | 19.5 | |
| Thalamus | tissue | 19.1 | |
| Vagina | tissue | 18.7 | high |
| Appendix | tissue | 18.4 | high |
| Midbrain | tissue | 18.4 | |
| Superior colliculi | tissue | 18.3 | |
| Fallopian tube | tissue | 18.2 | medium |
| Retina | tissue | 18.1 | |
| Cerebellum | tissue | 18.1 | high |
| Pons | tissue | 17.9 | |
| Pancreas | tissue | 17.6 | high |
| Skin 1 | tissue | 17.5 | medium |
| Cerebral cortex | tissue | 17.3 | high |
| Somatosensory cortex | tissue | 17.3 | |
| Locus coeruleus | tissue | 17.0 | |
| Thyroid gland | tissue | 16.8 | high |
| Substantia nigra | tissue | 16.7 | |
| Spinal cord | tissue | 16.7 | |
| Medulla oblongata | tissue | 16.3 | |
| Corpus callosum | tissue | 16.2 | |
| Hippocampal formation | tissue | 16.2 | |
| Motor cortex | tissue | 16.1 | |
| Spleen | tissue | 16.0 | medium |
| Lymph node | tissue | 15.9 | low |
| Putamen | tissue | 15.9 | |
| Occipital cortex | tissue | 15.5 | |
| Basal ganglia | tissue | 15.0 | high |
| Ventral forebrain | tissue | 15.0 | |
| Liver | tissue | 14.9 | not detected |
| Spleen | tissue | 14.7 | low |
| Entorhinal cortex | tissue | 14.6 | |
| Olfactory bulb | tissue | 14.6 | |
| Temporal cortex | tissue | 14.6 | |
| Prefrontal cortex | tissue | 14.5 | |
| Hypothalamus | tissue | 14.5 | |
| Retrosplenial and cingulate cortex | tissue | 14.2 | |
| Septum | tissue | 13.9 | |
| Bone marrow | tissue | 13.8 | medium |
| Placenta | tissue | 13.7 | medium |
| Periaqueductal gray | tissue | 13.5 | |
| Tonsil | tissue | 13.4 | medium |
Brain sub-regions (HPA Brain Atlas): detected in 380; highest nTPM — Temporo-occipital transitional zone (26.9), Olfactory area (26.8), Fusiform gyrus (25.6), Cerebellar nuclei (25.5), Occipital cortex (white matter) (25.5).
Regulation
Is transcription factor: yes
Downstream targets (CollecTRI)
5 targets:
| Target | Regulation |
|---|---|
| ATM | Unknown |
| BAX | Unknown |
| CDH1 | |
| CDKN1A | Unknown |
| DNMT1 | Unknown |
Upstream regulators (CollecTRI, top): BRD4, JMJD6
Functional genomics
gnomAD constraint: pLI 0.00145, LOEUF 0.691, missense Z 2.61 — population loss-of-function intolerance (pLI ≥ 0.9 = LoF-intolerant; lower LOEUF = more constrained). gnomAD
Regional missense constraint (gnomAD)
ENST00000372289 splits into 3 regions with different missense tolerance; 0 are missense-constrained. Missense variants in a constrained region (low observed/expected) are more likely to be pathogenic. gnomAD
| Region (GRCh38) | Missense obs / exp | o/e | Constrained |
|---|---|---|---|
| 1:44,213,754–44,218,355 | 118 / 189.8 | 0.62 | no |
| 1:44,218,356–44,219,096 | 142 / 149.5 | 0.95 | no |
| 1:44,219,097–44,220,615 | 179 / 285.9 | 0.63 | no |
Literature-anchored findings (GeneRIF, showing 8)
- RGS6 inhibited the transcriptional repressor activity of DMAP1. (PMID:14734556)
- Knocking down DMAP1 caused hypomethylation of the DNA repair products. (PMID:20864525)
- MMTR is an intrinsic negative cell cycle regulator that modulates the CAK kinase activity via interaction with MAT1. (PMID:20920467)
- positive staining for DNMT1 in clinical cancer specimens was significantly linked to lower rates of response to treatments and shorter survival of patients with pharyngeal cancer. (PMID:21284050)
- These results suggest that DMAP1 is a critical regulator of ATM activity and function (PMID:23318425)
- Targeted knockdown of human DNA methyltransferase 1 expression restores the expression levels of tumor suppressor genes, thus inhibiting the proliferation of cholangiocarcinoma cell line cells. (PMID:24361215)
- A novel tumour suppressor gene, MDGA2, which is frequently inactivated by promoter methylation in Gastric cancer, exerts a tumour suppressive function by cooperating with DMAP1 to activate the p53/p21 signalling cascade. (PMID:26206665)
- Findings reveal a regulatory role of Bub3 in DMAP1-mediated DNA methylation upon mitotic stress. (PMID:30553276)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | dmap1 | ENSDARG00000042087 |
| mus_musculus | Dmap1 | ENSMUSG00000009640 |
| rattus_norvegicus | Dmap1 | ENSRNOG00000019407 |
| drosophila_melanogaster | DMAP1 | FBGN0034537 |
| caenorhabditis_elegans | ekl-4 | WBGENE00013676 |
Mouse-model phenotypes
Observed phenotypes of the mouse ortholog (MGI:1913483) from MGI (Alliance of Genome Resources) — knockout/mutant phenotypes, ranked by annotation count. 4 distinct phenotype terms.
| Mouse phenotype (MP) | Records |
|---|---|
| embryonic lethality before implantation, complete penetrance | 1 |
| preweaning lethality, complete penetrance | 1 |
| embryonic lethality prior to organogenesis | 1 |
| embryonic lethality prior to tooth bud stage | 1 |
Additional cross-species homologs
Sequence homologs in species beyond Ensembl Compara’s model organisms, by Diamond local protein alignment (% sequence identity; best hit per species). Lower-identity rows are more distant homologs. The matched accessions’ gene symbols aren’t in biobtree yet, so each row shows the UniProt accession.
| Organism | UniProt | Identity | Method |
|---|---|---|---|
| Cryptococcus deneoformans JEC21 | P0CO96 | 100.0% | Diamond |
| Cryptococcus deneoformans B-3501A | P0CO97 | 100.0% | Diamond |
| Aspergillus fumigatus Af293 | Q4WNY4 | 68.0% | Diamond |
| Aspergillus nidulans FGSC A4 | Q5B4T5 | 68.0% | Diamond |
| Neurospora crassa OR74A | Q870Q1 | 59.7% | Diamond |
| Kluyveromyces lactis NRRL Y-1140 | Q6CSS3 | 58.7% | Diamond |
| Eremothecium gossypii ATCC 10895 | Q752S6 | 56.9% | Diamond |
| Fusarium graminearum PH-1 | Q4HY90 | 54.2% | Diamond |
| Candida albicans SC5314 | Q5AAJ7 | 39.6% | Diamond |
| Mycosarcoma maydis | Q4PG15 | 37.9% | Diamond |
| Arabidopsis thaliana | Q8VZL6 | 37.0% | Diamond |
| Schizosaccharomyces pombe 972h- | O14308 | 36.9% | Diamond |
Genomic neighbors (locus context)
Genes flanking this one on the chromosome (NCBI/Entrez gene neighborhood). Positional context only — some neighbors share regulatory elements (bidirectional promoters, antisense/overlapping transcripts), but chromosomal adjacency is not itself a functional relationship (see Interactions for that).
| Symbol | Type | Entrez |
|---|---|---|
| ERI3-IT1 | ncRNA | 100874278 |
| ERI3 | protein-coding | 79033 |
| SNORA110 | snoRNA | 106635545 |
| MIR5584 | ncRNA | 100847089 |
| RNF220 | protein-coding | 55182 |
Protein
Protein identifiers
DNA methyltransferase 1-associated protein 1 — Q9NPF5 (reviewed: Q9NPF5)
All UniProt accessions (6): Q9NPF5, Q5TG36, Q5TG37, Q5TG38, Q5TG39, Q5TG40
UniProt curated annotations — full annotation on UniProt →
Function. Involved in transcription repression and activation. Its interaction with HDAC2 may provide a mechanism for histone deacetylation in heterochromatin following replication of DNA at late firing origins. Can also repress transcription independently of histone deacetylase activity. May specifically potentiate DAXX-mediated repression of glucocorticoid receptor-dependent transcription. Component of the NuA4 histone acetyltransferase (HAT) complex which is involved in transcriptional activation of select genes principally by acetylation of nucleosomal histones H4 and H2A. This modification may both alter nucleosome - DNA interactions and promote interaction of the modified histones with other proteins which positively regulate transcription. This complex may be required for the activation of transcriptional programs associated with oncogene and proto-oncogene mediated growth induction, tumor suppressor mediated growth arrest and replicative senescence, apoptosis, and DNA repair. NuA4 may also play a direct role in DNA repair when recruited to sites of DNA damage. Participates in the nuclear localization of URI1 and increases its transcriptional corepressor activity.
Subunit / interactions. Component of the NuA4 histone acetyltransferase complex which contains the catalytic subunit KAT5/TIP60 and the subunits EP400, TRRAP/PAF400, BRD8/SMAP, EPC1, DMAP1/DNMAP1, RUVBL1/TIP49, RUVBL2, ING3, actin, ACTL6A/BAF53A, MORF4L1/MRG15, MORF4L2/MRGX, MRGBP, YEATS4/GAS41, VPS72/YL1 and MEAF6. Component of a NuA4-related complex which contains EP400, TRRAP/PAF400, SRCAP, BRD8/SMAP, EPC1, DMAP1/DNMAP1, RUVBL1/TIP49, RUVBL2, actin, ACTL6A/BAF53A, VPS72 and YEATS4/GAS41. DMAP1 also forms a complex with DNMT1 and HDAC2. Throughout S phase it interacts directly with the N-terminus of DNMT1, which serves to recruit DMAP1 to replication foci. DMAP1 interacts with ING1, a component of the mSin3A transcription repressor complex, although this interaction is not required for recruitment of ING1 to heterochromatin. Interacts directly with the transcriptional corepressor TSG101. Interacts with the pro-apoptotic protein DAXX. Interacts with URI1.
Subcellular location. Nucleus. Cytoplasm.
RefSeq proteins (3): NP_001029195, NP_001029196, NP_061973* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR008468 | DMAP1 | Domain |
| IPR027109 | Swc4/Dmap1 | Family |
| IPR032563 | DAMP1_SANT-like | Domain |
Pfam: PF05499, PF16282
UniProt features (49 total): helix 19, strand 8, sequence conflict 4, turn 4, compositionally biased region 4, region of interest 3, modified residue 2, cross-link 2, chain 1, domain 1, coiled-coil region 1
Structure
Experimental structures (PDB)
18 structures by resolution:
| PDB | Title | Method | Resolution (Å) |
|---|---|---|---|
| 4IEJ | Crystal structure of a DNA methyltransferase 1 associated protein 1 (DMAP1) from Homo … | X-RAY DIFFRACTION | 1.45 |
| 3HM5 | SANT domain of human DNA methyltransferase 1 associated protein 1 | X-RAY DIFFRACTION | 1.8 |
| 8QR1 | Cryo-EM structure of the human Tip60 complex | ELECTRON MICROSCOPY | 2.4 |
| 9C57 | Reconstituted P400 Subcomplex of the human TIP60 complex | ELECTRON MICROSCOPY | 2.75 |
| 9CAE | Cryo-EM structure of the reconstituted RuvBL lobe of the human TIP60 complex (composite … | ELECTRON MICROSCOPY | 3.07 |
| 8X15 | Structure of nucleosome-bound SRCAP-C in the apo state | ELECTRON MICROSCOPY | 3.2 |
| 8X19 | Structure of nucleosome-bound SRCAP-C in the ADP-BeFx-bound state | ELECTRON MICROSCOPY | 3.2 |
| 8X1C | Structure of nucleosome-bound SRCAP-C in the ADP-bound state | ELECTRON MICROSCOPY | 3.2 |
| 8XVT | The core subcomplex of human NuA4/TIP60 complex | ELECTRON MICROSCOPY | 3.2 |
| 9C6N | ARP module of the human TIP60 complex | ELECTRON MICROSCOPY | 3.29 |
| 9CAC | Cryo-EM structure of the RuvBL lobe of the native human TIP60 complex (composite … | ELECTRON MICROSCOPY | 3.43 |
| 9Y3G | Extended cryo-EM structure of human SRCAP-CFDP1-nucleosome complex in the activated state | ELECTRON MICROSCOPY | 4.1 |
| 9Y3F | Extended cryo-EM structure of human SRCAP-CFDP1-nucleosome complex in the poised state | ELECTRON MICROSCOPY | 4.5 |
| 9Y3H | Human SRCAP-CFDP1-nucleosome complex in the unwrapping state of the H2A.Z histone … | ELECTRON MICROSCOPY | 4.5 |
| 9Y3E | Extended cryo-EM structure of human SRCAP-nucleosome complex in the pre-engaged state | ELECTRON MICROSCOPY | 5 |
| 9C62 | P400 subcomplex of the native human TIP60 complex | ELECTRON MICROSCOPY | 5.28 |
| 9Y3D | Extended cryo-EM structure of the human SRCAP-nucleosome complex in the fully-engaged … | ELECTRON MICROSCOPY | 7.1 |
| 8XVG | Structure of human NuA4/TIP60 complex | ELECTRON MICROSCOPY | 9.4 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q9NPF5-F1 | 75.46 | 0.40 |
Human Protein Atlas
Protein class: Predicted intracellular proteins
Protein evidence: Evidence at protein level
Antibody reliability (HPA): IH enhanced
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (4)
| Type | Positions |
|---|---|
| Phosphothreonine | 445 |
| Phosphoserine | 448 |
| Glycyl lysine isopeptide (lys-gly) (interchain with g-cter in sumo2) | 27, 214 |
Function
Pathways and Gene Ontology
Reactome pathways
0 curated (TAS) of 3; 0 disease pathways. Curated-first; evidence = TAS (manually curated) vs IEA (electronic inference).
3 pathways:
| ID | Pathway | Evidence |
|---|---|---|
| R-HSA-3247509 | Chromatin modifying enzymes | — |
| R-HSA-4839726 | Chromatin organization | — |
| R-HSA-3214847 | HATs acetylate histones | electronic |
MSigDB gene sets: 391 (showing top):
GOBP_NEGATIVE_REGULATION_OF_EPITHELIAL_CELL_PROLIFERATION, GOBP_REGULATION_OF_DOUBLE_STRAND_BREAK_REPAIR, GOBP_NEGATIVE_REGULATION_OF_REPRODUCTIVE_PROCESS, GOBP_REGULATION_OF_DNA_RECOMBINATION, GOBP_RESPONSE_TO_ETHANOL, GOBP_INTRACELLULAR_PROTEIN_TRANSPORT, FISCHER_G1_S_CELL_CYCLE, GOBP_NEGATIVE_REGULATION_OF_CELL_GROWTH, GOBP_POSITIVE_REGULATION_OF_INTRACELLULAR_PROTEIN_TRANSPORT, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_UP, GOBP_GROWTH, GOBP_POSITIVE_REGULATION_OF_PROTEIN_LOCALIZATION, MODULE_511, GOBP_REGULATION_OF_DOUBLE_STRAND_BREAK_REPAIR_VIA_HOMOLOGOUS_RECOMBINATION, GOBP_ESTABLISHMENT_OF_PROTEIN_LOCALIZATION_TO_ORGANELLE
GO Biological Process (14): negative regulation of transcription by RNA polymerase II (GO:0000122), DNA repair (GO:0006281), chromatin remodeling (GO:0006338), DNA-templated transcription (GO:0006351), regulation of DNA-templated transcription (GO:0006355), positive regulation of protein import into nucleus (GO:0042307), regulation of apoptotic process (GO:0042981), response to ethanol (GO:0045471), negative regulation of DNA-templated transcription (GO:0045892), positive regulation of DNA-templated transcription (GO:0045893), regulation of cell cycle (GO:0051726), positive regulation of double-strand break repair via homologous recombination (GO:1905168), regulation of double-strand break repair (GO:2000779), chromatin organization (GO:0006325)
GO Molecular Function (3): transcription corepressor activity (GO:0003714), RNA polymerase II-specific DNA-binding transcription factor binding (GO:0061629), protein binding (GO:0005515)
GO Cellular Component (8): Swr1 complex (GO:0000812), nucleus (GO:0005634), nucleoplasm (GO:0005654), replication fork (GO:0005657), cytoplasm (GO:0005737), cytosol (GO:0005829), NuA4 histone acetyltransferase complex (GO:0035267), chromosome (GO:0005694)
Reactome top-level categories
2 top-level categories:
| Category | Pathways |
|---|---|
| Chromatin modifying enzymes | 1 |
| Chromatin organization | 1 |
GO top-level categories
45 GO namespaces:
| Category | Terms |
|---|---|
| cellular anatomical structure | 4 |
| DNA-templated transcription | 3 |
| negative regulation of DNA-templated transcription | 2 |
| regulation of DNA-templated transcription | 2 |
| regulation of transcription by RNA polymerase II | 1 |
| transcription by RNA polymerase II | 1 |
| DNA metabolic process | 1 |
| DNA damage response | 1 |
| chromatin organization | 1 |
| gene expression | 1 |
| RNA biosynthetic process | 1 |
| regulation of gene expression | 1 |
| regulation of RNA biosynthetic process | 1 |
| protein import into nucleus | 1 |
| regulation of protein import into nucleus | 1 |
| positive regulation of nucleocytoplasmic transport | 1 |
| positive regulation of intracellular protein transport | 1 |
| positive regulation of protein localization to nucleus | 1 |
| apoptotic process | 1 |
| regulation of programmed cell death | 1 |
| response to alcohol | 1 |
| negative regulation of RNA biosynthetic process | 1 |
| positive regulation of RNA biosynthetic process | 1 |
| cell cycle | 1 |
| regulation of cellular process | 1 |
| double-strand break repair via homologous recombination | 1 |
| regulation of double-strand break repair via homologous recombination | 1 |
| positive regulation of DNA recombination | 1 |
| positive regulation of double-strand break repair | 1 |
| regulation of DNA repair | 1 |
| double-strand break repair | 1 |
| cellular component organization | 1 |
| transcription coregulator activity | 1 |
| DNA-binding transcription factor binding | 1 |
| binding | 1 |
| histone deacetylase complex | 1 |
| nuclear chromosome | 1 |
| INO80-type complex | 1 |
| intracellular membrane-bounded organelle | 1 |
| nuclear lumen | 1 |
| chromosome | 1 |
| intracellular anatomical structure | 1 |
| cytoplasm | 1 |
| H4/H2A histone acetyltransferase complex | 1 |
| intracellular membraneless organelle | 1 |
Experimentally-supported GO annotations
GO terms backed by direct experimental evidence (ECO experimental codes) — 10 of 25 annotations. The rest are phylogenetic / computational / electronic (IEA).
10 experimentally-supported GO terms:
| GO term | NS | Evidence |
|---|---|---|
| negative regulation of transcription by RNA polymerase II | BP | direct assay |
| positive regulation of double-strand break repair via homologous recombination | BP | direct assay |
| positive regulation of protein import into nucleus | BP | direct assay |
| regulation of cell cycle | BP | mutant phenotype |
| NuA4 histone acetyltransferase complex | CC | direct assay |
| cytoplasm | CC | direct assay |
| cytosol | CC | direct assay |
| nucleoplasm | CC | direct assay |
| nucleus | CC | direct assay |
| RNA polymerase II-specific DNA-binding transcription factor binding | MF | direct assay |
Protein interactions and networks
STRING
showing 15 of 1,658 interactions by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| DMAP1 | DIP2B | Q9P265 | 925 |
| DMAP1 | YEATS4 | O95619 | 863 |
| DMAP1 | MEAF6 | Q9HAF1 | 815 |
| DMAP1 | EP400 | Q96L91 | 810 |
| DMAP1 | BRD8 | Q9H0E9 | 800 |
| DMAP1 | RUVBL1 | P82276 | 795 |
| DMAP1 | DNMT1 | P26358 | 782 |
| DMAP1 | TRRAP | Q9Y4A5 | 754 |
| DMAP1 | SRCAP | Q6ZRS2 | 740 |
| DMAP1 | MORF4L1 | Q9UBU8 | 740 |
| DMAP1 | MRGBP | Q9NV56 | 737 |
| DMAP1 | KAT5 | Q92993 | 735 |
| DMAP1 | VPS72 | Q15906 | 727 |
| DMAP1 | RUVBL2 | Q9Y230 | 713 |
| DMAP1 | CFDP1 | Q9UEE9 | 712 |
IntAct
Human interaction partners of DMAP1 in IntAct, one row per partner (best MIscore; records = supporting IntAct interaction records).
showing 30 of 40 partners by confidence:
| Partner | Interaction type | MIscore | Records |
|---|---|---|---|
| MORF4L1 | physical association | 0.670 | 3 |
| BFSP2 | physical association | 0.560 | 5 |
| C1orf216 | physical association | 0.560 | 5 |
| TCHP | physical association | 0.560 | 5 |
| ARFIP2 | physical association | 0.560 | 3 |
| CCHCR1 | physical association | 0.560 | 3 |
| CDCA7L | physical association | 0.560 | 3 |
| DAXX | physical association | 0.560 | 3 |
| EXOC8 | physical association | 0.560 | 3 |
| GAS8 | physical association | 0.560 | 3 |
| GINS4 | physical association | 0.560 | 3 |
| HSF2BP | physical association | 0.560 | 3 |
| KRT75 | physical association | 0.560 | 3 |
| LMNB1 | physical association | 0.560 | 3 |
| LRSAM1 | physical association | 0.560 | 3 |
| MIS18A | physical association | 0.560 | 3 |
| NAP1L2 | physical association | 0.560 | 3 |
| PFDN1 | physical association | 0.560 | 3 |
| PIBF1 | physical association | 0.560 | 3 |
| SBK3 | physical association | 0.560 | 3 |
| SUOX | physical association | 0.560 | 3 |
| TCEANC | physical association | 0.560 | 3 |
| TLK2 | physical association | 0.560 | 3 |
| TRIM21 | physical association | 0.560 | 3 |
| TSGA10IP | physical association | 0.560 | 3 |
| TXLNA | physical association | 0.560 | 3 |
| TXLNB | physical association | 0.560 | 3 |
| DR1 | association | 0.530 | 1 |
| JAZF1 | association | 0.530 | 1 |
| AR | physical association | 0.470 | 1 |
BioGRID (363 interactions; top human partners by supporting records): KAT5 (Affinity Capture-MS; 12 records), RUVBL1 (Co-fractionation; 10 records), RUVBL2 (Co-fractionation; 10 records), MORF4L1 (Affinity Capture-MS; 9 records), BRD8 (Affinity Capture-MS; 8 records), MRGBP (Co-fractionation; 8 records), ING3 (Affinity Capture-MS; 7 records), YEATS4 (Affinity Capture-MS; 7 records), ACTL6A (Affinity Capture-MS; 6 records), EPC1 (Affinity Capture-MS; 6 records), MORF4L2 (Affinity Capture-MS; 6 records), SRCAP (Affinity Capture-MS; 6 records), TRRAP (Affinity Capture-MS; 6 records), VPS72 (Co-fractionation; 6 records), DAXX (Two-hybrid; 5 records)
SIGNOR signaling
3 signaling interactions:
| A | Effect | B | Mechanism |
|---|---|---|---|
| MDGA2 | “up-regulates quantity by stabilization” | DMAP1 | binding |
| DMAP1 | “form complex” | “NuA4 complex” | binding |
| SRC | “down-regulates activity” | DMAP1 | phosphorylation |
Protein complexes (CORUM) (12)
Experimentally-characterized complexes this protein is a subunit of (★ = the complex contains a known drug target).
12 complexes by size:
| Complex | Subunits | Members |
|---|---|---|
| H2A.Z histone-exchange complex p400/TIP60 | 27 | ZNHIT1, ACTL6A, DMAP1, MORF4L1, MRGBP, RUVBL1, VPS72, YEATS4, BRD8, H4C1, ING3, IPO9, PRKDC, SRCAP, ANP32E, EP400, EPC1, EPC2, H2AZ1, H2BC4, H3C1, KAT5, MORF4L2, RUVBL2, TRRAP, XRCC5, XRCC6 |
| ★ TIP60-C complex | 23 | TRRAP, DMAP1, H2AZ2, H2BC18, MORF4L2, RUVBL2, EP400, EPC1, H2AC20, KAT5, TUBB, YEATS4, ACTL6A, BRD8, MEAF6, MORF4L1, MRGBP, RUVBL1, VPS72, ACTBL2, CREB3L2, ING3, MBTD1 |
| NuA4/Tip60-HAT complex | 16 | MEAF6, VPS72, EPC1, MORF4L2, RUVBL1, ACTL6A, DMAP1, EP400, KAT5, RUVBL2, ING3, MORF4L1, MRGBP, TRRAP, YEATS4, BRD8 |
| NuA4/Tip60-HAT complex | 15 | EP400, MEAF6, RUVBL2, BRD8, KAT5, MRGBP, YEATS4, DMAP1, EPC1, MORF4L1, ING3, MORF4L2, RUVBL1, TRRAP, ACTL6A |
| NuA4/Tip60-HAT complex A | 15 | DMAP1, ING3, MEAF6, RUVBL2, TRRAP, YEATS4, BRD8, EPC1, EPC2, RUVBL1, ACTL6A, MORF4L1, MRGBP, EP400, KAT5 |
| NuA4/Tip60 HAT complex | 14 | EP400, EPC1, KAT5, YEATS4, ACTL6A, EPC2, ING3, MEAF6, MORF4L1, RUVBL1, RUVBL2, TRRAP, BRD8, DMAP1 |
| NuA4/Tip60 HAT complex | 10 | BRD8, DMAP1, EP400, EPC1, ING3, KAT5, MORF4L1, RUVBL1, ACTL6A, TRRAP |
| DMAP1-associated complex | 10 | DMAP1, EP400, EPC1, RUVBL1, RUVBL2, SRCAP, TRRAP, VPS72, ACTL6A, BRD8 |
| NuA4/Tip60-HAT complex B | 8 | EPC1, KAT5, MORF4L1, RUVBL1, RUVBL2, TRRAP, ACTL6A, DMAP1 |
| SRCAP-containing complex | 7 | SRCAP, YEATS4, ACTL6A, ACTR6, DMAP1, RUVBL1, RUVBL2 |
| ★ DAXX-DMAP1-DNMT1 complex | 3 | DAXX, DMAP1, DNMT1 |
| ★ DMAP1-DNMT1-RGS6 complex | 3 | DMAP1, DNMT1, RGS6 |
Disease & clinical
Genetic variants
Variant evidence for DMAP1: 111 ClinVar records (2 pathogenic / likely pathogenic); 2 GWAS associations. Per-variant detail is on Sugi Variant.
ClinVar
111 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 2 |
| Uncertain significance | 88 |
| Likely benign | 4 |
| Benign | 1 |
Top pathogenic / likely-pathogenic (2)
Showing all 2 pathogenic / likely-pathogenic ClinVar records, ranked by ClinVar review status (expert panel → multiple submitters → single submitter), then by number of submitting labs.
| Variant ID | HGVS | Classification | Review | Submitters |
|---|---|---|---|---|
| 1679375 | NM_019100.5(DMAP1):c.1024del (p.Glu342fs) | Likely pathogenic | criteria provided, single submitter | 1 |
| 4886923 | NM_019100.5(DMAP1):c.676C>T (p.Arg226Trp) | Likely pathogenic | criteria provided, single submitter | 1 |
Per-variant reference — Sugi Variant
Explore DMAP1’s pathogenic and likely-pathogenic variants individually — each with its ClinVar classification and conditions, applied ACMG criteria (ClinGen expert panel, where curated), the calibrated in-silico predictors (AlphaMissense, REVEL, SaProt, conservation), gnomAD frequency, and the predictor-disagreement QC signal — on Sugi Variant.
SpliceAI
Top 10 splice-impact sites by Δscore (adjacent positions with the same effect merged into one range; 25 predictions of 1,379):
| Position(s) | Effect | Δscore | Sites |
|---|---|---|---|
| 1:44213859–44213860 | donor_loss | 1.0000 | 3 |
| 1:44214701–44214702 | acceptor_loss | 1.0000 | 5 |
| 1:44214899–44214900 | donor_loss | 1.0000 | 3 |
| 1:44218573 | acceptor_gain | 1.0000 | |
| 1:44218578 | acceptor_gain | 1.0000 | |
| 1:44218586–44218587 | acceptor_loss | 1.0000 | 6 |
| 1:44219047 | acceptor_gain | 1.0000 | |
| 1:44219054–44219055 | acceptor_loss | 1.0000 | 3 |
| 1:44219189 | donor_gain | 1.0000 | |
| 1:44219212 | donor_gain | 1.0000 |
AlphaMissense
1,650 missense substitutions predicted likely pathogenic (of 3,024 scored), across 372 residues. Top 20 hotspot residues, ranked by the number of likely-pathogenic substitutions (of those reachable by a single-nucleotide change), then by mean score:
| Residue | Likely-pathogenic substitutions | Mean am_pathogenicity | Max am_pathogenicity |
|---|---|---|---|
| M53 | 9 | 0.973 | 1.000 |
| H113 | 8 | 0.998 | 1.000 |
| D6 | 8 | 0.993 | 0.998 |
| F100 | 8 | 0.993 | 1.000 |
| D176 | 8 | 0.992 | 0.998 |
| D107 | 8 | 0.991 | 0.999 |
| F126 | 8 | 0.988 | 1.000 |
| F312 | 8 | 0.977 | 1.000 |
| D438 | 8 | 0.966 | 0.984 |
| D219 | 8 | 0.964 | 0.992 |
| H54 | 8 | 0.962 | 0.995 |
| F129 | 8 | 0.956 | 0.999 |
| D9 | 8 | 0.951 | 0.992 |
| F171 | 8 | 0.947 | 0.999 |
| D267 | 8 | 0.947 | 0.990 |
| N365 | 8 | 0.939 | 0.999 |
| D64 | 8 | 0.933 | 0.989 |
| H222 | 8 | 0.929 | 0.994 |
| D168 | 8 | 0.921 | 0.988 |
| D370 | 8 | 0.921 | 0.990 |
HPA cancer prognostics
RNA cancer specificity: Low cancer specificity
Human Protein Atlas survival analysis — favorable = higher expression predicts better survival.
6 prognostic cancer types:
| Cancer | Prognostic | p-value |
|---|---|---|
| Kidney Renal Clear Cell Carcinoma (TCGA) | favorable | 1.91e-06 |
| Liver Hepatocellular Carcinoma (TCGA) | unfavorable | 3.4e-05 |
| Cervical Squamous Cell Carcinoma and Endocervical Adenocarcinoma (TCGA) | favorable | 0.000102 |
| Kidney Renal Clear Cell Carcinoma (TCGA) | favorable | 0.000343 |
| Liver Hepatocellular Carcinoma (TCGA) | unfavorable | 0.000343 |
| Colon Adenocarcinoma (TCGA) | favorable | 0.000975 |
Disease associations
OMIM: gene MIM:605077 | disease phenotypes:
GenCC curated gene-disease
1 curated gene-disease records:
| Disease | Classification | Inheritance | Records |
|---|---|---|---|
| neurodevelopmental disorder | Strong | Autosomal recessive |
Mondo (2): intellectual disability (MONDO:0001071), neurodevelopmental disorder (MONDO:0700092)
Orphanet (1): NON RARE IN EUROPE: Unexplained intellectual disability (Orphanet:319658)
GWAS associations
2 associations:
| Study | Trait | p-value |
|---|---|---|
| GCST009391_1489 | Metabolite levels | 3e-6 |
| GCST009391_1265 | Metabolite levels | 7e-6 |
EFO canonical traits (from GWAS)
2 canonical traits:
| EFO ID | Trait name |
|---|---|
| EFO:0010451 | aconitate measurement |
| EFO:0010458 | alpha-hydroxybutyric acid measurement |
MeSH disease descriptors
2 disease descriptors:
| Descriptor | Name | Tree numbers |
|---|---|---|
| D008607 | Intellectual Disability | C10.597.606.360; C23.888.592.604.646; F01.700.687; F03.625.539 |
| D065886 | Neurodevelopmental Disorders | F03.625 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL5724908 (SINGLE PROTEIN)
PharmGKB: 1 entry (CPIC guideline: no)
CTD chemical–gene interactions
26 total (human), top 26 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol A | decreases methylation, affects cotreatment, increases expression | 2 |
| aristolochic acid I | decreases expression | 1 |
| FR900359 | affects phosphorylation | 1 |
| TAK-243 | decreases sumoylation | 1 |
| methylmercuric chloride | decreases expression | 1 |
| sodium arsenite | increases expression | 1 |
| zinc chromate | decreases expression, increases abundance | 1 |
| potassium chromate(VI) | affects cotreatment, decreases expression | 1 |
| coumarin | increases phosphorylation | 1 |
| epigallocatechin gallate | affects cotreatment, decreases expression | 1 |
| chromium hexavalent ion | decreases expression, increases abundance | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| corosolic acid | increases expression | 1 |
| jinfukang | increases expression | 1 |
| Atrazine | decreases expression | 1 |
| Benzo(a)pyrene | affects methylation | 1 |
| Caffeine | decreases phosphorylation | 1 |
| Dexamethasone | affects cotreatment, increases expression | 1 |
| Dimethyl Sulfoxide | affects expression | 1 |
| Doxorubicin | decreases expression | 1 |
| Estradiol | decreases expression | 1 |
| Indomethacin | affects cotreatment, increases expression | 1 |
| Smoke | decreases expression | 1 |
| Tetrachlorodibenzodioxin | decreases expression | 1 |
| Tobacco Smoke Pollution | decreases expression | 1 |
| 1-Methyl-3-isobutylxanthine | affects cotreatment, increases expression | 1 |
ChEMBL screening assays
6 unique, capped per target: 6 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL5697415 | Binding | Inhibition of DMAP1 (unknown origin) assessed as fold change at 10 uM incubated for 1 hr by colloidal coomassie staining based LC-MS/MS analysis | Inhibition of BET recruitment to chromatin as an effective treatment for MLL-fusion leukaemia. — *Nature* |
Clinical trials (associated diseases)
Via MONDO — disease-level, not drug-specific.
showing 60 of 404 trials:
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT04586348 | Phase 4 | UNKNOWN | Prenatal Iodine Supplementation and Early Childhood Neurodevelopment |
| NCT04873115 | Phase 4 | UNKNOWN | Double-blind, Placebo-controlled, Randomized Clinical Trial Comparing the Efficacy and Safety of Sialanar Plus orAl rehabiLitation Against Placebo Plus Oral Rehabilitation for chIldren and Adolescents With seVere Sialorrhoea and Neurodisabilties, |
| NCT05657860 | Phase 4 | COMPLETED | Guanfacine Extended Release for the Reduction of Aggression and Self-injurious Behavior Associated With Prader-Willi Syndrome |
| NCT05744479 | Phase 4 | RECRUITING | Metformin for Antipsychotic-induced Weight Gain in Adults With Intellectual Disability |
| NCT06107829 | Phase 4 | WITHDRAWN | Valbenazine Treatment of Tardive Dyskinesia in Adults With Intellectual/Developmental Disabilities |
| NCT06997198 | Phase 4 | RECRUITING | Deutetrabenazine Treatment for Tardive Dyskinesia in Intellectual/Developmental Disabilities |
| NCT02559102 | Phase 3 | COMPLETED | Dexmedetomidine Sedation Versus General Anaesthesia for Inguinal Hernia Surgery in Infants |
| NCT02757079 | Phase 3 | COMPLETED | Study of the Efficacy and Safety of NPC-15 for Sleep Disorders of Children With Neurodevelopmental Disorders |
| NCT06915480 | Phase 3 | RECRUITING | Reducing Missed Appointments |
| NCT07377032 | Phase 3 | RECRUITING | TAP-GRIN: Interventional Study on Patients With GRIN-related Neurodevelopmental Disorders |
| NCT02270736 | Phase 3 | COMPLETED | Clinical Study to Investigate the Efficacy and Safety of NT 201 Compared to Placebo in the Treatment of Chronic Troublesome Drooling Associated With Neurological Disorders and/or Intellectual Disability |
| NCT02909959 | Phase 2 | COMPLETED | Sulforaphane for the Treatment of Young Men With Autism Spectrum Disorder |
| NCT06081348 | Phase 2 | RECRUITING | Sertraline vs. Placebo in the Treatment of Anxiety in Children and AdoLescents With NeurodevelopMental Disorders |
| NCT06352372 | Phase 2 | COMPLETED | Safety and Efficacy of tPBM for Epileptiform Activity in Autism |
| NCT02304302 | Phase 2 | COMPLETED | Down Syndrome Memantine Follow-up Study |
| NCT03862950 | Phase 2 | COMPLETED | A Trial of Metformin in Individuals With Fragile X Syndrome (Met) |
| NCT04529226 | Phase 2 | UNKNOWN | Study to Compare Clozapine vs Treatment as Usual in People With Intellectual Disability & Treatment-resistant Psychosis |
| NCT04821856 | Phase 2 | COMPLETED | Evaluation of the Effectiveness of Cannabidiol in Treating Severe Behavioural Problems in Children and Adolescents With Intellectual Disability |
| NCT00503191 | Phase 1 | COMPLETED | NeuroModulation Technique Treatment of Autism |
| NCT04475848 | Phase 1 | COMPLETED | A Study to Investigate the Safety, Tolerability, Pharmacokinetics, Pharmacodynamics and Food Effect of RO6953958 in Healthy Participants |
| NCT06300398 | Phase 1 | COMPLETED | IAMA-6 Oral Dose Study in Healthy Adults |
| NCT05273320 | Phase 1 | COMPLETED | Clinical Trial of Nabilone for Aggression in Adults With Intellectual and Developmental Disabilities |
| NCT05301361 | Phase 1 | ENROLLING_BY_INVITATION | Sensitivity of the NIH Toolbox to Stimulant Treatment in Intellectual Disabilities |
| NCT06016764 | Phase 1 | COMPLETED | Use of MRI and cTBS for Catatonia in Autism |
| NCT06586827 | Phase 1 | COMPLETED | Impact of Competency-Based Training and Technical Assistance Employment Outcomes of Individuals With ID/DD |
| NCT07531940 | Phase 1 | NOT_YET_RECRUITING | Escalating Doses of Memantine in Down Syndrome (MEDS-123) |
| NCT01783041 | Phase 2/3 | COMPLETED | Effect of Early L-Carnitine Supplementation on Neurodevelopmental Outcomes in Very Preterm Infants |
| NCT05767385 | Phase 2/3 | COMPLETED | Fetal Cerebrovascular Autoregulation in Congenital Heart Disease and Association With Neonatal Neurobehavior |
| NCT05675098 | Early Phase 1 | NOT_YET_RECRUITING | Central Nervous System Stimulants and Physical Function in Children With Cerebral Palsy |
| NCT00783783 | Not specified | COMPLETED | CYP2D6 Pharmacogenetics in Risperidone-Treated Children |
| NCT01778504 | Not specified | RECRUITING | Studying Childhood-onset Behavioral, Psychiatric, and Developmental Disorders |
| NCT01850784 | Not specified | UNKNOWN | High Energy Formula Feeding in Infants With Congenital Heart Disease |
| NCT01922791 | Not specified | COMPLETED | Nutrition and Pregnancy Intervention Study |
| NCT01942525 | Not specified | UNKNOWN | Influence of Intrauterine Growth Restriction on Amplitude-integrated EEG in Preterm Infants |
| NCT02003170 | Not specified | COMPLETED | Etiology and Early Diagnosis of Neurodevelopmental Disorders |
| NCT02118649 | Not specified | COMPLETED | Enhancing Behavior and Brain Response to Visual Targets Using a Computer Game |
| NCT02557191 | Not specified | TERMINATED | Biomarkers, Neurodevelopment and Preterm Infants |
| NCT02690675 | Not specified | COMPLETED | Iron Supplement Effect on Child Development |
| NCT02694003 | Not specified | COMPLETED | Better Nights, Better Days for Children With Neurodevelopment Disorders |
| NCT02792894 | Not specified | COMPLETED | Family Networks (FaNs) for Children With Developmental Disorders and Delays |
| NCT02871674 | Not specified | UNKNOWN | Good Night Project: Behavioural Sleep Interventions for Children With ADHD: A Randomised Controlled Trial |
| NCT02887157 | Not specified | COMPLETED | Analyzing Retinal Microanatomy in ROP |
| NCT02898298 | Not specified | COMPLETED | Positive Emotion Regulation Training in Children, Adolescents and Young Adults With and Without Developmental Disorder |
| NCT02912780 | Not specified | UNKNOWN | Introduction of Microsystems in a Level 3 Neonatal Intensive Care Unit |
| NCT03023293 | Not specified | COMPLETED | n-3 PUFAs, Irisin and Maternal Glucose Metabolism From Pregnancy to Postpartum |
| NCT03023644 | Not specified | COMPLETED | Improving Neurodevelopmental Outcomes in Children With Congenital Heart Disease: An Intervention Study |
| NCT03032991 | Not specified | UNKNOWN | Early Biomarkers of Neurodevelopment in Offspring of Diabetic Mothers |
| NCT03088189 | Not specified | TERMINATED | Effect of Parental Peri-conceptional Vitamin B12 Supplementation on Infant Neurocognitive Development in Offspring |
| NCT03096028 | Not specified | COMPLETED | Developmental Origins of Mental Health Disorders |
| NCT03148782 | Not specified | COMPLETED | Brain Plasticity Underlying Acquisition of New Organizational Skills in Children-R61 Phase |
| NCT03172104 | Not specified | COMPLETED | Neurobehavioural Development of Infants Born <30 Weeks Gestational Age Between Birth and Five Years of Age |
| NCT03222375 | Not specified | RECRUITING | SQUED™ Series 28.1 Home-use and Treatment of Autowave Reverberator of Autism |
| NCT03229928 | Not specified | COMPLETED | Clinical Testing of a Real-Time Behavior Measurement Tool: Measuring Outcomes for CHAnge |
| NCT03232489 | Not specified | UNKNOWN | Study for the Evaluation of the Feasibility of Applying Advanced MRI Scanning in Pediatric Clinical Practice |
| NCT03381027 | Not specified | COMPLETED | BABY SMART (Study of Massage Therapy, Sleep And neurodevelopMenT) |
| NCT03388294 | Not specified | COMPLETED | Evaluation of a Novel Intervention for Infants At Risk for Neurodevelopmental Disorders |
| NCT03410810 | Not specified | UNKNOWN | Childhood Outcomes of Preterm Brain Abnormalities |
| NCT03492060 | Not specified | RECRUITING | Longitudinal Study of Neurogenetic Disorders |
| NCT03577756 | Not specified | COMPLETED | Neurodevelopmental Assessment of Infants With Cystic Fibrosis |
| NCT03654248 | Not specified | COMPLETED | Let’s Get Organized in Adult Psychiatric/habilitation Care |
Related Atlas pages
- Associated diseases: neurodevelopmental disorder