DNAJB13
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Also known as TSARG6RSPH16A
Summary
DNAJB13 (DnaJ heat shock protein family (Hsp40) member B13, HGNC:30718) is a protein-coding gene on chromosome 11q13.4, encoding DnaJ homolog subfamily B member 13 (P59910). Functions as part of axonemal radial spoke complexes that play an important part in the motility of sperm and cilia.
This gene encodes a member of the heat shock protein 40 co-chaperone family which is produced in large amounts in the testis and is located on the radial spokes of the axoneme in human sperm flagella and other flagellar structures. The encoded protein associates with the sperm annulus, as part of the septin complex, through direct interaction with septin 4, during sperm terminal differentiation. Naturally occurring mutations in this gene are associated with primary ciliary dyskinesia and male infertility.
Source: NCBI Gene 374407 — RefSeq curated summary.
At a glance
- Gene–disease (curated): primary ciliary dyskinesia 34 (Strong, GenCC) — +1 more curated relationship
- GWAS associations: 1
- Clinical variants (ClinVar): 230 total — 9 pathogenic, 4 likely-pathogenic
- Phenotypes (HPO): 54
- MANE Select transcript:
NM_153614
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:30718 |
| Approved symbol | DNAJB13 |
| Name | DnaJ heat shock protein family (Hsp40) member B13 |
| Location | 11q13.4 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | TSARG6, RSPH16A |
| Ensembl gene | ENSG00000187726 |
| Ensembl biotype | protein_coding |
| OMIM | 610263 |
| Entrez | 374407 |
Gene structure
Transcript identifiers
Ensembl transcripts: 6 — 5 protein_coding, 1 retained_intron
ENST00000339764, ENST00000535730, ENST00000537753, ENST00000542350, ENST00000543947, ENST00000897971
RefSeq mRNA: 2 — MANE Select: NM_153614
NM_001377263, NM_153614
CCDS: CCDS8227
Canonical transcript exons
ENST00000339764 — 8 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001370087 | 73959494 | 73959655 |
| ENSE00001377750 | 73964878 | 73965035 |
| ENSE00001381264 | 73968345 | 73968458 |
| ENSE00001383720 | 73951026 | 73951137 |
| ENSE00002470248 | 73969961 | 73970281 |
| ENSE00002483728 | 73969246 | 73969322 |
| ENSE00003556881 | 73966138 | 73966251 |
| ENSE00003684859 | 73958317 | 73958420 |
Expression profiles
Bgee: expression breadth ubiquitous, 167 present calls, max score 98.71.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.4017 / max 53.6134, expressed in 122 samples.
FANTOM5 promoters (1 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 115831 | 0.4017 | 122 |
Top tissues by expression
250 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right uterine tube | UBERON:0001302 | 98.71 | gold quality |
| bronchial epithelial cell | CL:0002328 | 93.60 | gold quality |
| bronchus | UBERON:0002185 | 92.18 | gold quality |
| granulocyte | CL:0000094 | 90.06 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 89.84 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 88.23 | gold quality |
| fallopian tube | UBERON:0003889 | 84.39 | gold quality |
| left testis | UBERON:0004533 | 84.05 | gold quality |
| right testis | UBERON:0004534 | 82.75 | gold quality |
| nasal cavity epithelium | UBERON:0005384 | 82.74 | silver quality |
| oviduct epithelium | UBERON:0004804 | 81.64 | gold quality |
| mucosa of paranasal sinus | UBERON:0005030 | 81.28 | gold quality |
| testis | UBERON:0000473 | 81.13 | gold quality |
| tibialis anterior | UBERON:0001385 | 79.80 | silver quality |
| ileal mucosa | UBERON:0000331 | 77.58 | gold quality |
| left uterine tube | UBERON:0001303 | 75.90 | gold quality |
| monocyte | CL:0000576 | 75.72 | gold quality |
| pancreatic ductal cell | CL:0002079 | 75.30 | silver quality |
| leukocyte | CL:0000738 | 75.24 | gold quality |
| epithelium of nasopharynx | UBERON:0001951 | 73.00 | gold quality |
| nasal cavity mucosa | UBERON:0001826 | 72.87 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 69.79 | gold quality |
| endometrium | UBERON:0001295 | 69.75 | gold quality |
| right lung | UBERON:0002167 | 69.60 | gold quality |
| kidney epithelium | UBERON:0004819 | 69.30 | gold quality |
| deltoid | UBERON:0001476 | 68.00 | gold quality |
| endocervix | UBERON:0000458 | 67.88 | gold quality |
| cardiac muscle of right atrium | UBERON:0003379 | 66.88 | gold quality |
| oocyte | CL:0000023 | 65.49 | silver quality |
| seminal vesicle | UBERON:0000998 | 65.27 | silver quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 7.88 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
7 targeting DNAJB13, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4795-3P | 100.00 | 74.62 | 4024 |
| HSA-MIR-223-3P | 99.99 | 70.14 | 1140 |
| HSA-MIR-6780B-3P | 99.13 | 67.18 | 622 |
| HSA-MIR-6810-3P | 97.96 | 64.57 | 1023 |
| HSA-MIR-10397-3P | 97.78 | 65.70 | 601 |
| HSA-MIR-7154-3P | 97.65 | 65.02 | 985 |
| HSA-MIR-7161-3P | 96.79 | 68.79 | 798 |
Literature-anchored findings (GeneRIF, showing 4)
- TSARG6 is specifically expressed in adult testis with a transcript of 1.8 kb, which has a role in spermatogenesis and apoptosis (PMID:14970903)
- this study, which establishes mutations in DNAJB13 as a cause of PCD, unveils the key role played by DNAJB13 in the proper formation and function of ciliary and flagellar axonemes in humans (PMID:27486783)
- Missense mutation in DNAJB13 gene correlated with male fertility in asthenozoospermia. (PMID:31342671)
- A novel homozygous mutation in DNAJB13-a gene associated with the sperm axoneme-leads to teratozoospermia. (PMID:35166991)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | dnajb13 | ENSDARG00000043157 |
| mus_musculus | Dnajb13 | ENSMUSG00000030708 |
| rattus_norvegicus | Dnajb13 | ENSRNOG00000017975 |
| drosophila_melanogaster | CG12020 | FBGN0035273 |
Paralogs (11): DNAJB11 (ENSG00000090520), DNAJB6 (ENSG00000105993), DNAJB9 (ENSG00000128590), DNAJB1 (ENSG00000132002), DNAJB2 (ENSG00000135924), DNAJB5 (ENSG00000137094), DNAJB12 (ENSG00000148719), DNAJB4 (ENSG00000162616), DNAJB14 (ENSG00000164031), DNAJB7 (ENSG00000172404), DNAJB8 (ENSG00000179407)
Protein
Protein identifiers
DnaJ homolog subfamily B member 13 — P59910 (reviewed: P59910)
Alternative names: Testis and spermatogenesis cell-related protein 6, Testis spermatocyte apoptosis-related gene 6 protein, Testis spermatogenesis apoptosis-related gene 3 protein, Testis spermatogenesis apoptosis-related gene 6 protein
All UniProt accessions (2): H0YFX2, P59910
UniProt curated annotations — full annotation on UniProt →
Function. Functions as part of axonemal radial spoke complexes that play an important part in the motility of sperm and cilia.
Subunit / interactions. Homodimer. Component of the axonemal radial spoke complex 1 (RS1), at least composed of spoke head proteins RSPH1, RSPH3, RSPH9 and the cilia-specific component RSPH4A or sperm-specific component RSPH6A, spoke stalk proteins RSPH14, DNAJB13, DYDC1, ROPN1L and NME5, and the anchor protein IQUB. Interacts with SUN5. Interacts with IQUB. Interacts with DNAH12.
Subcellular location. Cell projection. Cilium. Flagellum.
Tissue specificity. Specifically expressed in testis and trachea.
Disease relevance. Ciliary dyskinesia, primary, 34 (CILD34) [MIM:617091] A form of primary ciliary dyskinesia, a disorder characterized by abnormalities of motile cilia. Respiratory infections leading to chronic inflammation and bronchiectasis are recurrent, due to defects in the respiratory cilia. CILD34 inheritance is autosomal recessive. The disease is caused by variants affecting the gene represented in this entry.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P59910-1 | 1 | yes |
| P59910-2 | 2, TSARG5 |
RefSeq proteins (2): NP_001364192, NP_705842* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001623 | DnaJ_domain | Domain |
| IPR002939 | DnaJ_C | Domain |
| IPR008971 | HSP40/DnaJ_pept-bd | Homologous_superfamily |
| IPR018253 | DnaJ_domain_CS | Conserved_site |
| IPR036869 | J_dom_sf | Homologous_superfamily |
| IPR051339 | DnaJ_subfamily_B | Family |
Pfam: PF00226, PF01556
UniProt features (5 total): splice variant 2, chain 1, domain 1, sequence variant 1
Structure
Experimental structures (PDB)
1 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 8J07 | ELECTRON MICROSCOPY | 4.1 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P59910-F1 | 86.81 | 0.61 |
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 210 (showing top):
TGACCTY_ERR1_Q2, chr11q13, GOBP_PROTEIN_MATURATION, GOBP_CILIUM_ORGANIZATION, GOBP_CILIUM_MOVEMENT, GOBP_CILIUM_OR_FLAGELLUM_DEPENDENT_CELL_MOTILITY, GOBP_ORGANELLE_ASSEMBLY, GOBP_PROTEIN_FOLDING, GOBP_MICROTUBULE_BUNDLE_FORMATION, GOBP_CELL_PROJECTION_ORGANIZATION, GOBP_AXONEME_ASSEMBLY, LEE_AGING_NEOCORTEX_UP, GOCC_CYTOPLASMIC_REGION, GOCC_MOTILE_CILIUM, GAVIN_FOXP3_TARGETS_CLUSTER_P3
GO Biological Process (4): protein folding (GO:0006457), axonemal central apparatus assembly (GO:1904158), microtubule-based process (GO:0007017), cell projection organization (GO:0030030)
GO Molecular Function (3): obsolete unfolded protein binding (GO:0051082), protein-folding chaperone binding (GO:0051087), protein binding (GO:0005515)
GO Cellular Component (9): radial spoke (GO:0001534), cytosol (GO:0005829), motile cilium (GO:0031514), sperm flagellum (GO:0036126), sperm head-tail coupling apparatus (GO:0120212), cytoplasm (GO:0005737), cilium (GO:0005929), axoneme (GO:0005930), cell projection (GO:0042995)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 5 |
| cellular process | 2 |
| protein maturation | 1 |
| cellular component assembly | 1 |
| axoneme assembly | 1 |
| cellular component organization | 1 |
| protein binding | 1 |
| binding | 1 |
| axoneme | 1 |
| protein-containing complex | 1 |
| cytoplasm | 1 |
| cilium | 1 |
| 9+2 motile cilium | 1 |
| intracellular anatomical structure | 1 |
| intraciliary transport particle | 1 |
| membrane-bounded organelle | 1 |
| plasma membrane bounded cell projection | 1 |
| cytoskeleton | 1 |
| microtubule | 1 |
| ciliary plasm | 1 |
Protein interactions and networks
STRING
2325 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| DNAJB13 | SEPTIN4 | O43236 | 732 |
| DNAJB13 | RSPH4A | Q5TD94 | 582 |
| DNAJB13 | CFAP43 | Q8NDM7 | 575 |
| DNAJB13 | QRICH2 | Q9H0J4 | 574 |
| DNAJB13 | RSPH3 | Q86UC2 | 570 |
| DNAJB13 | SUN5 | Q8TC36 | 567 |
| DNAJB13 | ODAD4 | Q96NG3 | 566 |
| DNAJB13 | TTC21A | Q8NDW8 | 561 |
| DNAJB13 | ARMC2 | Q8NEN0 | 553 |
| DNAJB13 | SPEF2 | Q9C093 | 539 |
| DNAJB13 | RSPH9 | Q9H1X1 | 526 |
| DNAJB13 | RSPH1 | Q8WYR4 | 507 |
| DNAJB13 | SLC26A8 | Q96RN1 | 506 |
| DNAJB13 | DNAAF6 | Q9NQM4 | 505 |
| DNAJB13 | DNAH2 | Q9P225 | 505 |
IntAct
40 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| DNAJB13 | PIBF1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| DNAJB13 | MDFI | psi-mi:“MI:0915”(physical association) | 0.560 |
| DNAJB13 | RAB3IP | psi-mi:“MI:0915”(physical association) | 0.560 |
| DNAJB13 | ZC3H12A | psi-mi:“MI:0915”(physical association) | 0.560 |
| DNAJB13 | LHX4 | psi-mi:“MI:0915”(physical association) | 0.560 |
| DNAJB13 | ZRANB1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| PLK4 | DNAJB13 | psi-mi:“MI:0915”(physical association) | 0.560 |
| TOM1L1 | DNAJB13 | psi-mi:“MI:0915”(physical association) | 0.560 |
| DNAJB13 | MSS51 | psi-mi:“MI:0915”(physical association) | 0.560 |
| DNAJB13 | SEPTIN1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| DNAJB13 | GORASP2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| DNAJB13 | PICK1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| DNAJB13 | PB2 | psi-mi:“MI:0915”(physical association) | 0.510 |
| DNAJB13 | PB2 | psi-mi:“MI:0915”(physical association) | 0.370 |
| DNAJB13 | PIBF1 | psi-mi:“MI:0915”(physical association) | 0.000 |
| DNAJB13 | MDFI | psi-mi:“MI:0915”(physical association) | 0.000 |
| DNAJB13 | RAB3IP | psi-mi:“MI:0915”(physical association) | 0.000 |
| DNAJB13 | ZC3H12A | psi-mi:“MI:0915”(physical association) | 0.000 |
| DNAJB13 | PICK1 | psi-mi:“MI:0915”(physical association) | 0.000 |
| DNAJB13 | LHX4 | psi-mi:“MI:0915”(physical association) | 0.000 |
| DNAJB13 | ZRANB1 | psi-mi:“MI:0915”(physical association) | 0.000 |
| DNAJB13 | PLK4 | psi-mi:“MI:0915”(physical association) | 0.000 |
| DNAJB13 | TOM1L1 | psi-mi:“MI:0915”(physical association) | 0.000 |
| DNAJB13 | MSS51 | psi-mi:“MI:0915”(physical association) | 0.000 |
| SEPTIN1 | DNAJB13 | psi-mi:“MI:0915”(physical association) | 0.000 |
| DNAJB13 | GORASP2 | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (47): DNAJB13 (Two-hybrid), DNAJB13 (Two-hybrid), DNAJB13 (Two-hybrid), DNAJB13 (Two-hybrid), DNAJB13 (Two-hybrid), DNAJB13 (Two-hybrid), DNAJB13 (Two-hybrid), DNAJB13 (Two-hybrid), DNAJB13 (Two-hybrid), DNAJB13 (Two-hybrid), DNAJB13 (Two-hybrid), DNAJB13 (Two-hybrid), ANP32B (Affinity Capture-MS), PTGES3 (Affinity Capture-MS), SUGT1 (Affinity Capture-MS)
ESM2 similar proteins: A6QBG7, B9FHF3, O35824, O60884, O74752, O75953, O89114, O94625, O94657, P25294, P25303, P25491, P25685, P42824, P42825, P43644, P59910, P78004, P81999, Q03363, Q04960, Q09912, Q0JB88, Q24133, Q2HJ94, Q2KIT4, Q3AQP5, Q3MI00, Q3ZBA6, Q54ED3, Q5BIP8, Q5R8J8, Q5RAJ6, Q626I7, Q6MNG0, Q6TUG0, Q8A8C3, Q8GWW8, Q8MPX3, Q8TA83
Diamond homologs: A0LJ41, A1K4C4, A1V9Q3, A4JBS2, A5EYE5, A5IIT4, A6LJ63, A6Q486, A6QBG7, A7I2G3, A9IGC5, B0B7R0, B0BBX5, B1LCI2, B1ZUS0, B2UBP2, B3CP03, B3QPW8, B4S9D0, B7IFE0, B8DQW8, B9KAB9, C1DD87, O35723, O54946, O75190, O75953, O84345, O89114, P25491, P25685, P25686, P31689, P42824, P47265, P59910, P63036, P63037, P78004, Q04960
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
230 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 9 |
| Likely pathogenic | 4 |
| Uncertain significance | 73 |
| Likely benign | 71 |
| Benign | 57 |
Top pathogenic / likely-pathogenic (13)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1805029 | NM_153614.4(DNAJB13):c.92_95delinsGAG (p.His31fs) | Pathogenic |
| 2076101 | NM_153614.4(DNAJB13):c.98del (p.Pro33fs) | Pathogenic |
| 253328 | NM_153614.4(DNAJB13):c.833T>G (p.Met278Arg) | Pathogenic |
| 253329 | NM_153614.4(DNAJB13):c.68+1G>C | Pathogenic |
| 3621175 | NM_153614.4(DNAJB13):c.406C>T (p.Gln136Ter) | Pathogenic |
| 3681557 | NC_000011.10:g.73964876AG[1] | Pathogenic |
| 4719893 | NM_153614.4(DNAJB13):c.421G>T (p.Glu141Ter) | Pathogenic |
| 4764625 | NM_153614.4(DNAJB13):c.391C>T (p.Arg131Ter) | Pathogenic |
| 4798695 | NM_153614.4(DNAJB13):c.562del (p.Trp188fs) | Pathogenic |
| 2710385 | NM_153614.4(DNAJB13):c.720+2T>C | Likely pathogenic |
| 2752096 | NM_153614.4(DNAJB13):c.335-2A>G | Likely pathogenic |
| 2961411 | NM_153614.4(DNAJB13):c.172+1G>A | Likely pathogenic |
| 3064827 | NM_153614.4(DNAJB13):c.493-1G>A | Likely pathogenic |
SpliceAI
1628 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 11:73958421:G:GG | donor_gain | 1.0000 |
| 11:73958425:G:GG | donor_gain | 1.0000 |
| 11:73964877:GA:G | acceptor_gain | 1.0000 |
| 11:73965031:GAAGG:G | donor_gain | 1.0000 |
| 11:73965034:GG:G | donor_gain | 1.0000 |
| 11:73965035:GG:G | donor_gain | 1.0000 |
| 11:73966132:CTATA:C | acceptor_loss | 1.0000 |
| 11:73966133:TATAG:T | acceptor_loss | 1.0000 |
| 11:73966134:ATAGG:A | acceptor_loss | 1.0000 |
| 11:73966135:TAGG:T | acceptor_loss | 1.0000 |
| 11:73966137:G:GT | acceptor_loss | 1.0000 |
| 11:73966240:G:GT | donor_gain | 1.0000 |
| 11:73966241:A:T | donor_gain | 1.0000 |
| 11:73968254:A:AG | acceptor_gain | 1.0000 |
| 11:73968255:G:GG | acceptor_gain | 1.0000 |
| 11:73968459:GTGA:G | donor_loss | 1.0000 |
| 11:73968460:T:A | donor_loss | 1.0000 |
| 11:73969323:G:GG | donor_gain | 1.0000 |
| 11:73969959:A:AG | acceptor_gain | 1.0000 |
| 11:73969960:G:GG | acceptor_gain | 1.0000 |
| 11:73969960:GC:G | acceptor_gain | 1.0000 |
| 11:73969960:GCCCC:G | acceptor_gain | 1.0000 |
| 11:73958313:CCA:C | acceptor_loss | 0.9900 |
| 11:73958314:CA:C | acceptor_loss | 0.9900 |
| 11:73958315:A:AT | acceptor_loss | 0.9900 |
| 11:73958387:C:T | donor_gain | 0.9900 |
| 11:73958399:GCC:G | donor_gain | 0.9900 |
| 11:73958411:C:G | donor_gain | 0.9900 |
| 11:73958423:GA:G | donor_gain | 0.9900 |
| 11:73958653:G:GT | donor_gain | 0.9900 |
AlphaMissense
2103 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 11:73970032:T:C | L290P | 0.997 |
| 11:73966184:T:C | L180P | 0.996 |
| 11:73969992:G:T | G277W | 0.996 |
| 11:73968413:G:C | R225S | 0.995 |
| 11:73968413:G:T | R225S | 0.995 |
| 11:73968427:T:C | L230P | 0.995 |
| 11:73969992:G:A | G277R | 0.995 |
| 11:73969992:G:C | G277R | 0.995 |
| 11:73968406:T:C | F223S | 0.994 |
| 11:73969289:G:C | R255P | 0.994 |
| 11:73969993:G:A | G277E | 0.994 |
| 11:73965014:A:C | K157N | 0.993 |
| 11:73965014:A:T | K157N | 0.993 |
| 11:73969250:T:C | L242P | 0.993 |
| 11:73970025:G:T | G288W | 0.993 |
| 11:73958399:G:C | A51P | 0.992 |
| 11:73966231:T:C | F196L | 0.992 |
| 11:73966233:T:A | F196L | 0.992 |
| 11:73966233:T:G | F196L | 0.992 |
| 11:73969246:G:C | A241P | 0.992 |
| 11:73969976:G:C | K271N | 0.992 |
| 11:73969976:G:T | K271N | 0.992 |
| 11:73958331:C:A | A28D | 0.991 |
| 11:73958412:T:C | L55P | 0.991 |
| 11:73966205:G:A | G187D | 0.991 |
| 11:73969996:T:C | M278T | 0.991 |
| 11:73951136:G:C | A23P | 0.990 |
| 11:73958318:T:G | Y24D | 0.990 |
| 11:73958322:G:C | R25P | 0.990 |
| 11:73958412:T:A | L55Q | 0.990 |
dbSNP variants (sampled 300 via entrez): RS1000419861 (11:73950983 C>T), RS1001106909 (11:73962466 C>T), RS1001108440 (11:73952617 G>T), RS1001309024 (11:73962743 C>A), RS1001348200 (11:73956577 C>A,G,T), RS1001818192 (11:73949436 T>G), RS1001854937 (11:73962241 C>G,T), RS1001883040 (11:73954737 C>G), RS1001919730 (11:73963361 AAAAG>A), RS1002518507 (11:73967086 C>G), RS1002906795 (11:73959911 C>T), RS1003116009 (11:73965704 C>A), RS1003295354 (11:73954450 G>A), RS1003324599 (11:73950105 A>G), RS1003579085 (11:73954274 C>T)
Disease associations
OMIM: gene MIM:610263 | disease phenotypes: MIM:617091, MIM:189800, MIM:244400
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| primary ciliary dyskinesia 34 | Strong | Autosomal recessive |
| primary ciliary dyskinesia | Supportive | Autosomal dominant |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| primary ciliary dyskinesia 34 | Moderate | AR |
Mondo (3): primary ciliary dyskinesia 34 (MONDO:0014909), preeclampsia (MONDO:0005081), primary ciliary dyskinesia (MONDO:0016575)
Orphanet (2): Primary ciliary dyskinesia (Orphanet:244), Preeclampsia (Orphanet:275555)
HPO phenotypes
54 total (30 of 54 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000119 | Abnormality of the genitourinary system |
| HP:0000238 | Hydrocephalus |
| HP:0000365 | Hearing impairment |
| HP:0000389 | Chronic otitis media |
| HP:0000403 | Recurrent otitis media |
| HP:0000405 | Conductive hearing impairment |
| HP:0000510 | Rod-cone dystrophy |
| HP:0000750 | Delayed speech and language development |
| HP:0000924 | Abnormality of the skeletal system |
| HP:0001217 | Clubbing |
| HP:0001627 | Abnormal heart morphology |
| HP:0001669 | Transposition of the great arteries |
| HP:0001696 | Situs inversus totalis |
| HP:0001719 | Double outlet right ventricle |
| HP:0001742 | Nasal congestion |
| HP:0001746 | Asplenia |
| HP:0001748 | Polysplenia |
| HP:0002011 | Morphological central nervous system abnormality |
| HP:0002110 | Bronchiectasis |
| HP:0002119 | Ventriculomegaly |
| HP:0002257 | Chronic rhinitis |
| HP:0002566 | Intestinal malrotation |
| HP:0002643 | Neonatal respiratory distress |
| HP:0002837 | Recurrent bronchitis |
| HP:0002878 | Respiratory failure |
| HP:0003251 | Male infertility |
| HP:0005301 | Persistent left superior vena cava |
| HP:0005425 | Recurrent sinopulmonary infections |
| HP:0006536 | Airway obstruction |
GWAS associations
1 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST005760_4 | Dimensional psychopathology (Cognitive) | 2.000000e-07 |
EFO canonical traits (1, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0009098 | cognitive domain measurement |
MeSH disease descriptors (3)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D002925 | Ciliary Motility Disorders | C08.200; C09.150; C16.131.077.245.500; C16.320.184.500 |
| D007619 | Kartagener Syndrome | C08.127.384.500; C08.200.531; C08.695.501; C09.150.531; C14.240.400.280.500; C14.280.400.280.500; C16.131.077.245.500.531; C16.131.240.400.280.500; C16.131.740.501; C16.131.810.250.500; C16.320.184.500.531; C16.320.480 |
| D011225 | Pre-Eclampsia | C12.050.703.395.249 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB variants
1 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs655717 | DNAJB13, UCP2 | 0.00 | 0 |
CTD chemical–gene interactions
20 total (human), top 20 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Benzo(a)pyrene | affects methylation, increases methylation | 2 |
| Smoke | increases abundance, increases expression, decreases expression | 2 |
| Aflatoxin B1 | affects methylation, increases methylation | 2 |
| triphenyl phosphate | affects expression | 1 |
| sulforaphane | increases expression | 1 |
| nickel chloride | increases expression | 1 |
| benzo(e)pyrene | increases methylation | 1 |
| aflatoxin B2 | increases methylation | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| bisphenol S | decreases expression | 1 |
| Resveratrol | affects cotreatment, decreases expression | 1 |
| Air Pollutants | increases abundance, increases expression | 1 |
| Caffeine | increases phosphorylation | 1 |
| Ivermectin | decreases expression | 1 |
| Methapyrilene | increases methylation | 1 |
| Plant Extracts | affects cotreatment, decreases expression | 1 |
| Tobacco Smoke Pollution | decreases expression | 1 |
| Urethane | decreases expression | 1 |
| Vanadium | increases abundance, increases methylation | 1 |
| Metals, Heavy | increases methylation, increases abundance | 1 |
Clinical trials (associated diseases)
371 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00117546 | PHASE4 | UNKNOWN | Cardiovascular and Autonomic Reactivity in Women With a History of Pre-eclampsia |
| NCT00567957 | PHASE4 | UNKNOWN | Remifentanil for General Anesthesia in Preeclamptics |
| NCT01030627 | PHASE4 | COMPLETED | Treatment Approaches to Preeclampsia |
| NCT01352234 | PHASE4 | COMPLETED | Comparison of Doses of Acetylsalicylic Acid in Women With Previous History of Preeclampsia |
| NCT01361425 | PHASE4 | UNKNOWN | Anti-Hypertensive Treatment In Stable Pregnant Women With Severe Pre-Eclampsia (Metildopape) |
| NCT01729468 | PHASE4 | COMPLETED | Prevention of Pre-eclampsia and SGA by Low-Dose Aspirin in Nulliparous Women With Abnormal First-trimester Uterine Artery Dopplers |
| NCT01761916 | PHASE4 | COMPLETED | Clonidine Versus Captopril for Treatment of Postpartum Very High Blood Pressure |
| NCT01912677 | PHASE4 | COMPLETED | Oral Antihypertensive Regimens for Management of Hypertension in Pregnancy |
| NCT02025426 | PHASE4 | TERMINATED | Phenylephrine Versus Ephedrine in Pre-eclampsia |
| NCT02091401 | PHASE4 | COMPLETED | A Trial Comparing Treatment With the Springfusor Infusion Pump to the IV Magnesium Sulfate Regimen |
| NCT02163655 | PHASE4 | COMPLETED | Diuretics for Postpartum High Blood Pressure in Preeclampsia |
| NCT02338687 | PHASE4 | COMPLETED | Low Dose Calcium to Prevent Preeclampsia |
| NCT02396030 | PHASE4 | TERMINATED | Different Schemes of Magnesium Sulfate for Preeclampsia |
| NCT02531490 | PHASE4 | UNKNOWN | Early Vascular Adjustments During Hypertensive Pregnancy |
| NCT02699827 | PHASE4 | COMPLETED | Adding MgSO4 to Epidural Levobupivacaine in CS for Patients With Preeclampsia |
| NCT02835339 | PHASE4 | COMPLETED | Magnesium Sulfate in Obese Preeclamptics |
| NCT02891174 | PHASE4 | COMPLETED | The Effect of Ibuprofen on Post-partum Blood Pressure in Women With Hypertensive Disorders of Pregnancy |
| NCT02911701 | PHASE4 | COMPLETED | Effect of Acetaminophen on Postpartum Blood Pressure Control in Preeclampsia With Severe Features |
| NCT03171480 | PHASE4 | COMPLETED | Use of Nitrous Oxide Donor for Labor Induction in Women With PreEclampsia |
| NCT03233880 | PHASE4 | UNKNOWN | Impact of Antichlamydial Treatment on the Rate of Preeclampsia |
| NCT03237000 | PHASE4 | UNKNOWN | Effect of Administering Intravenous Magnesium Sulfate on Fetal Cardiotocography and Neonatal Outcome in Preeclamptic Patients |
| NCT03506724 | PHASE4 | COMPLETED | Response to Anti-hypertensives in Pregnant and Postpartum Patients |
| NCT03674606 | PHASE4 | COMPLETED | Trial of Early Screening Test for Pre-eclampsia and Growth Restriction |
| NCT03735433 | PHASE4 | TERMINATED | The Effect of Two Aspirin Dosing Strategies for Obese Women at High Risk for Preeclampsia |
| NCT03824119 | PHASE4 | UNKNOWN | Postpartum NSAIDS and Maternal Hypertension |
| NCT04051567 | PHASE4 | UNKNOWN | Low-dose Aspirin for Prevention of Adverse Pregnancy Outcomes in Twin Pregnancies |
| NCT04077853 | PHASE4 | COMPLETED | Progesterone in Expectantly Managed Early-onset Preeclampsia |
| NCT04158830 | PHASE4 | WITHDRAWN | Aspirin (ASA) Therapy and Preeclampsia Prevention |
| NCT04424693 | PHASE4 | UNKNOWN | Comparing the Incidence of Preeclampsia Between Pregnant Women Receiving Tdap Vaccinations at Week 28 or at Week 36 |
| NCT04631627 | PHASE4 | UNKNOWN | Early Prediction and Randomised Prevention of Preeclampsia With Low Dose Aspirin in Chinese Cohort |
| NCT04656665 | PHASE4 | UNKNOWN | The Effectiveness of Aspirin on Preventing Pre-eclampsia |
| NCT04797949 | PHASE4 | WITHDRAWN | Adherence to Universal Aspirin Compared to Screening Indicated Aspirin for Prevention of Preeclampsia |
| NCT04908982 | PHASE4 | UNKNOWN | Aspirin for the Prevention of Preeclampsia in Women With Stage 1 Hypertension |
| NCT05221164 | PHASE4 | UNKNOWN | 162 mg of Aspirin for Prevention of Preeclampsia |
| NCT05294952 | PHASE4 | UNKNOWN | co Ihibtory Receptor in Preeclampsia |
| NCT05514847 | PHASE4 | ACTIVE_NOT_RECRUITING | Low Dose Aspirin for Preterm Preeclampsia Preventionmg/day Dose in High-risk Patients |
| NCT05586373 | PHASE4 | COMPLETED | Ibuprofen vs Dipyrone After C-section in Preeclampsia |
| NCT06069102 | PHASE4 | COMPLETED | Optimal Blood Pressure Treatment Thresholds Postpartum |
| NCT06107335 | PHASE4 | NOT_YET_RECRUITING | Effect of Albumin Versus Routine Care on Hemodynamic Response and Stability in Patients With Preeclampsia Guided by a Non-invasive Hemodynamic Monitoring System During Cesarean Delivery With Spinal Anesthesia |
| NCT06281665 | PHASE4 | RECRUITING | Treatment With Aspirin After Preeclampsia: TAP Trial |
Related Atlas pages
- Associated diseases: primary ciliary dyskinesia 34, primary ciliary dyskinesia
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): preeclampsia, primary ciliary dyskinesia, primary ciliary dyskinesia 34