DNAJC9-AS1

Summary

DNAJC9-AS1 (DNAJC9 and MRPS16 antisense RNA 1, HGNC:31432) is a long non-coding RNA gene on chromosome 10q22.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:31432
Approved symbol	DNAJC9-AS1
Name	DNAJC9 and MRPS16 antisense RNA 1
Location	10q22.2
Locus type	RNA, long non-coding
Status	Approved
Aliases	bA537A6.3
Ensembl gene	ENSG00000236756
Ensembl biotype	lncRNA
Entrez	414245
RNAcentral	URS000075ABEA — lncRNA, 2858 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 16 — 16 lncRNA

ENST00000394864, ENST00000440197, ENST00000457147, ENST00000457758, ENST00000513954, ENST00000717560, ENST00000717561, ENST00000717562, ENST00000717563, ENST00000791504, ENST00000791505, ENST00000791506, ENST00000791507, ENST00000791508, ENST00000791509, ENST00000791510

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000394864 — 2 exons

Exon	Start	End
ENSE00001785197	73253801	73254349
ENSE00004172655	73252741	73253254

Expression profiles

Bgee: expression breadth ubiquitous, 159 present calls, max score 83.08.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 3.9364 / max 58.5584, expressed in 1422 samples.

FANTOM5 promoters (4 alternative TSS)

Promoter ID	TPM avg	Samples expressed
105525	2.2665	1141
105524	0.9467	550
105526	0.3674	186
105523	0.3557	202

Top tissues by expression

244 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
colonic epithelium	UBERON:0000397	83.08	gold quality
bone marrow cell	CL:0002092	81.41	gold quality
cortical plate	UBERON:0005343	80.22	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	78.65	gold quality
apex of heart	UBERON:0002098	76.71	gold quality
right uterine tube	UBERON:0001302	75.97	gold quality
lower esophagus mucosa	UBERON:0035834	75.51	gold quality
cerebellar hemisphere	UBERON:0002245	74.66	gold quality
cerebellar cortex	UBERON:0002129	74.57	gold quality
ganglionic eminence	UBERON:0004023	74.32	gold quality
right hemisphere of cerebellum	UBERON:0014890	74.26	gold quality
right frontal lobe	UBERON:0002810	73.99	gold quality
mucosa of transverse colon	UBERON:0004991	73.56	gold quality
stromal cell of endometrium	CL:0002255	73.52	gold quality
adrenal tissue	UBERON:0018303	73.21	gold quality
anterior cingulate cortex	UBERON:0009835	72.93	gold quality
sural nerve	UBERON:0015488	72.36	gold quality
adenohypophysis	UBERON:0002196	72.34	gold quality
cerebellum	UBERON:0002037	72.09	gold quality
hypothalamus	UBERON:0001898	71.41	gold quality
hindlimb stylopod muscle	UBERON:0004252	71.37	gold quality
heart left ventricle	UBERON:0002084	70.62	gold quality
Brodmann (1909) area 9	UBERON:0013540	70.53	gold quality
right ovary	UBERON:0002118	70.11	gold quality
right testis	UBERON:0004534	70.04	gold quality
cardiac ventricle	UBERON:0002082	69.60	gold quality
right adrenal gland cortex	UBERON:0035827	69.52	gold quality
right lobe of liver	UBERON:0001114	69.51	gold quality
pituitary gland	UBERON:0000007	69.37	gold quality
gastrocnemius	UBERON:0001388	69.34	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.66

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.