DNAL1
geneOn this page
Also known as MGC124351700010H15RiKCILD16
Summary
DNAL1 (dynein axonemal light chain 1, HGNC:23247) is a protein-coding gene on chromosome 14q24.3, encoding Dynein axonemal light chain 1 (Q4LDG9). Part of the multisubunit axonemal ATPase complexes that generate the force for cilia motility and govern beat frequency.
This gene encodes an axonemal dynein light chain which functions as a component of the outer dynein arms complex. This complex acts as the molecular motor that provides the force to move cilia in an ATP-dependent manner. The encoded protein is expressed in tissues with motile cilia or flagella and may be involved in the movement of sperm flagella. Alternate splicing results in multiple transcript variants.
Source: NCBI Gene 83544 — RefSeq curated summary.
At a glance
- Gene–disease (curated): primary ciliary dyskinesia 16 (Definitive, ClinGen) — +1 more curated relationship
- Clinical variants (ClinVar): 152 total — 7 pathogenic, 4 likely-pathogenic
- Phenotypes (HPO): 53
- MANE Select transcript:
NM_031427
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:23247 |
| Approved symbol | DNAL1 |
| Name | dynein axonemal light chain 1 |
| Location | 14q24.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | MGC12435, 1700010H15RiK, CILD16 |
| Ensembl gene | ENSG00000119661 |
| Ensembl biotype | protein_coding |
| OMIM | 610062 |
| Entrez | 83544 |
Gene structure
Transcript identifiers
Ensembl transcripts: 11 — 10 protein_coding, 1 nonsense_mediated_decay
ENST00000311089, ENST00000553645, ENST00000554113, ENST00000554159, ENST00000554339, ENST00000554871, ENST00000555631, ENST00000555919, ENST00000559993, ENST00000893991, ENST00000914563
RefSeq mRNA: 2 — MANE Select: NM_031427
NM_001201366, NM_031427
CCDS: CCDS45134, CCDS55928
Canonical transcript exons
ENST00000553645 — 8 exons
| Exon | Start | End |
|---|---|---|
| ENSE00002470058 | 73644986 | 73645042 |
| ENSE00002529739 | 73695902 | 73703732 |
| ENSE00003541919 | 73654847 | 73654885 |
| ENSE00003555555 | 73671542 | 73671597 |
| ENSE00003668442 | 73687259 | 73687385 |
| ENSE00003677400 | 73658847 | 73658956 |
| ENSE00003677805 | 73661987 | 73662042 |
| ENSE00003789871 | 73689375 | 73689515 |
Expression profiles
Bgee: expression breadth ubiquitous, 224 present calls, max score 97.88.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 11.5861 / max 301.4259, expressed in 1718 samples.
FANTOM5 promoters (1 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 140548 | 11.5861 | 1718 |
Top tissues by expression
253 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| buccal mucosa cell | CL:0002336 | 97.88 | gold quality |
| oviduct epithelium | UBERON:0004804 | 95.65 | gold quality |
| left testis | UBERON:0004533 | 93.88 | gold quality |
| right testis | UBERON:0004534 | 93.53 | gold quality |
| bronchial epithelial cell | CL:0002328 | 93.52 | gold quality |
| bronchus | UBERON:0002185 | 92.62 | gold quality |
| testis | UBERON:0000473 | 91.34 | gold quality |
| mucosa of paranasal sinus | UBERON:0005030 | 90.39 | gold quality |
| calcaneal tendon | UBERON:0003701 | 88.43 | gold quality |
| corpus callosum | UBERON:0002336 | 87.64 | gold quality |
| caput epididymis | UBERON:0004358 | 87.15 | gold quality |
| islet of Langerhans | UBERON:0000006 | 86.41 | gold quality |
| kidney epithelium | UBERON:0004819 | 86.22 | silver quality |
| fallopian tube | UBERON:0003889 | 85.80 | gold quality |
| medial globus pallidus | UBERON:0002477 | 85.34 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 84.97 | gold quality |
| corpus epididymis | UBERON:0004359 | 84.95 | gold quality |
| right uterine tube | UBERON:0001302 | 84.41 | gold quality |
| tendon | UBERON:0000043 | 84.05 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 83.04 | gold quality |
| globus pallidus | UBERON:0001875 | 82.83 | gold quality |
| ventricular zone | UBERON:0003053 | 82.67 | gold quality |
| pancreatic ductal cell | CL:0002079 | 82.30 | silver quality |
| cerebellar vermis | UBERON:0004720 | 82.05 | gold quality |
| adrenal tissue | UBERON:0018303 | 82.03 | gold quality |
| prefrontal cortex | UBERON:0000451 | 82.02 | gold quality |
| cortical plate | UBERON:0005343 | 81.83 | gold quality |
| colonic epithelium | UBERON:0000397 | 81.73 | gold quality |
| entorhinal cortex | UBERON:0002728 | 81.16 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 80.98 | gold quality |
Single-cell (SCXA)
Detected in 3 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-CURD-114 | yes | 11.65 |
| E-ANND-3 | yes | 8.56 |
| E-MTAB-8060 | no | 202.76 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
331 targeting DNAL1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-8485 | 100.00 | 77.57 | 4731 |
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-190A-3P | 100.00 | 80.35 | 5520 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-5692B | 100.00 | 71.32 | 2622 |
| HSA-MIR-5692C | 100.00 | 71.32 | 2622 |
| HSA-MIR-4262 | 100.00 | 73.26 | 3931 |
| HSA-MIR-1277-5P | 100.00 | 73.95 | 5056 |
| HSA-MIR-4673 | 100.00 | 66.64 | 1490 |
| HSA-MIR-3064-3P | 100.00 | 70.09 | 1254 |
| HSA-MIR-4668-3P | 100.00 | 68.74 | 2635 |
| HSA-MIR-7110-3P | 100.00 | 73.18 | 2486 |
| HSA-MIR-371B-5P | 99.99 | 75.34 | 4759 |
| HSA-MIR-3662 | 99.99 | 73.82 | 5684 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-6870-5P | 99.99 | 68.55 | 2115 |
| HSA-MIR-181A-5P | 99.99 | 72.96 | 2995 |
| HSA-MIR-181B-5P | 99.99 | 72.97 | 2996 |
| HSA-MIR-181C-5P | 99.99 | 72.95 | 2996 |
| HSA-MIR-181D-5P | 99.99 | 73.04 | 2997 |
| HSA-MIR-373-5P | 99.98 | 75.36 | 4753 |
| HSA-MIR-616-5P | 99.98 | 75.58 | 4775 |
| HSA-MIR-548N | 99.98 | 71.94 | 4170 |
| HSA-MIR-12136 | 99.98 | 72.81 | 5713 |
| HSA-MIR-520D-5P | 99.98 | 73.34 | 4883 |
| HSA-MIR-524-5P | 99.98 | 73.43 | 4882 |
| HSA-MIR-3692-3P | 99.98 | 70.27 | 2139 |
Literature-anchored findings (GeneRIF, showing 4)
- identification of the human (DNAL1) ortholog of the Chlamydomonas LC1-gene; protein interaction studies demonstrated binding of DNAL1 and DNAH5; DNAL1 considered a candidate for primary ciliary dyskinesia (PMID:15845866)
- DNAL1 mutation could help to elucidate the interaction between the DNAL1 to dynein heavy chain and to tubulin. (PMID:21496787)
- DNAL1 and MAP4 may exert their functions in the HIV life cycle at reverse transcription, prior to nuclear translocation. (PMID:22018492)
- Deletions in DNAL1 Cause Primary Ciliary Dyskinesia Across North American Indigenous Populations. (PMID:36841509)
Cross-species orthologs
6 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | dnal1 | ENSDARG00000034042 |
| danio_rerio | DNAL1 | ENSDARG00000097505 |
| mus_musculus | Dnal1 | ENSMUSG00000042523 |
| rattus_norvegicus | Dnal1 | ENSRNOG00000042333 |
| drosophila_melanogaster | CG10839 | FBGN0028858 |
| drosophila_melanogaster | ODA-Dnal1 | FBGN0033408 |
Protein
Protein identifiers
Dynein axonemal light chain 1 — Q4LDG9 (reviewed: Q4LDG9)
All UniProt accessions (7): Q4LDG9, G3V2M0, G3V389, G3V424, G3V5I4, H0YJD6, H0YM28
UniProt curated annotations — full annotation on UniProt →
Function. Part of the multisubunit axonemal ATPase complexes that generate the force for cilia motility and govern beat frequency. Component of the outer arm dynein (ODA). May be involved in a mechanosensory feedback mechanism controlling ODA activity based on external conformational cues by tethering the outer arm dynein heavy chain (DNAH5) to the microtubule within the axoneme. Important for ciliary function in the airways and for the function of the cilia that produce the nodal flow essential for the determination of the left-right asymmetry.
Subunit / interactions. Interacts with ZMYND10 (via C-terminus). Interacts with DNAH5, a outer arm dynein heavy chain. Interacts with tubulin located within the A-tubule of the outer doublets in a ATP-independent manner.
Subcellular location. Cytoplasm. Cytoskeleton. Cilium axoneme.
Tissue specificity. Expressed in tissues carrying motile cilia such as respiratory epithelia, ependyma and testis.
Disease relevance. Ciliary dyskinesia, primary, 16 (CILD16) [MIM:614017] A disorder characterized by abnormalities of motile cilia. Respiratory infections leading to chronic inflammation and bronchiectasis are recurrent, due to defects in the respiratory cilia; reduced fertility is often observed in male patients due to abnormalities of sperm tails. Half of the patients exhibit randomization of left-right body asymmetry and situs inversus, due to dysfunction of monocilia at the embryonic node. Primary ciliary dyskinesia associated with situs inversus is referred to as Kartagener syndrome. The disease is caused by variants affecting the gene represented in this entry.
Miscellaneous. Outer (ODAs) and inner (IDAs) dynein arms contain the molecular motors that generate the force to move cilia by ATP-dependent reactions. There are two mechanosensory systems that monitor and respond to the mechanical state (curvature) of the axoneme. One system involves the central pair microtubule complex and radial spokes and the second system involves the outer dynein arms.
Similarity. Belongs to the dynein light chain LC1-type family.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q4LDG9-1 | 1 | yes |
| Q4LDG9-2 | 2 | |
| Q4LDG9-3 | 3 |
RefSeq proteins (2): NP_001188295, NP_113615* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001611 | Leu-rich_rpt | Repeat |
| IPR025875 | Leu-rich_rpt_4 | Repeat |
| IPR032675 | LRR_dom_sf | Homologous_superfamily |
Pfam: PF12799
UniProt features (12 total): repeat 4, splice variant 2, modified residue 2, initiator methionine 1, chain 1, sequence variant 1, domain 1
Structure
Experimental structures (PDB)
1 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 8J07 | ELECTRON MICROSCOPY | 4.1 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q4LDG9-F1 | 94.81 | 0.94 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (2): 2, 56
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 258 (showing top):
TGCGCANK_UNKNOWN, RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_UP, GOBP_AXONEMAL_DYNEIN_COMPLEX_ASSEMBLY, chr14q24, SENGUPTA_NASOPHARYNGEAL_CARCINOMA_DN, GOBP_CILIUM_ORGANIZATION, KEGG_HUNTINGTONS_DISEASE, GOBP_OUTER_DYNEIN_ARM_ASSEMBLY, GOBP_ORGANELLE_ASSEMBLY, CYTAGCAAY_UNKNOWN, GOBP_MICROTUBULE_BUNDLE_FORMATION, GOBP_CELL_PROJECTION_ORGANIZATION, GOBP_AXONEME_ASSEMBLY, GOCC_CYTOPLASMIC_REGION, TCCCRNNRTGC_UNKNOWN
GO Biological Process (1): outer dynein arm assembly (GO:0036158)
GO Molecular Function (3): alpha-tubulin binding (GO:0043014), dynein heavy chain binding (GO:0045504), protein binding (GO:0005515)
GO Cellular Component (6): cytoplasm (GO:0005737), microtubule (GO:0005874), outer dynein arm (GO:0036157), cytoskeleton (GO:0005856), dynein complex (GO:0030286), cell projection (GO:0042995)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 2 |
| axonemal dynein complex assembly | 1 |
| tubulin binding | 1 |
| protein binding | 1 |
| binding | 1 |
| intracellular anatomical structure | 1 |
| microtubule cytoskeleton | 1 |
| polymeric cytoskeletal fiber | 1 |
| axonemal dynein complex | 1 |
| intracellular membraneless organelle | 1 |
| microtubule associated complex | 1 |
| catalytic complex | 1 |
Protein interactions and networks
STRING
1354 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| DNAL1 | FTCD | O95954 | 979 |
| DNAL1 | SEPSECS | Q9HD40 | 874 |
| DNAL1 | DNAH5 | Q8TE73 | 870 |
| DNAL1 | MAP1B | P46821 | 862 |
| DNAL1 | MAP1LC3A | Q9H492 | 811 |
| DNAL1 | GAN | Q9H2C0 | 764 |
| DNAL1 | MAP1A | P78559 | 669 |
| DNAL1 | NUP210 | Q8TEM1 | 666 |
| DNAL1 | DYNC1I2 | Q13409 | 634 |
| DNAL1 | DYNLL1 | P63167 | 619 |
| DNAL1 | ASGR1 | P07306 | 614 |
| DNAL1 | SP100 | P23497 | 542 |
| DNAL1 | DNALI1 | O14645 | 495 |
| DNAL1 | CACNA1B | Q00975 | 489 |
| DNAL1 | DNAI2 | Q9GZS0 | 484 |
IntAct
8 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| MFHAS1 | PGRMC2 | psi-mi:“MI:0914”(association) | 0.590 |
| DNAL1 | LRRC40 | psi-mi:“MI:0915”(physical association) | 0.560 |
| DNAL1 | RAP1GDS1 | psi-mi:“MI:0914”(association) | 0.530 |
| DNAL1 | ALOX12B | psi-mi:“MI:0914”(association) | 0.350 |
| DNAL1 | LRRC40 | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (9): RAP1GDS1 (Affinity Capture-MS), RHOA (Affinity Capture-MS), DNAL1 (Two-hybrid), RHOA (Affinity Capture-MS), DNAL1 (Affinity Capture-MS), RAP1GDS1 (Affinity Capture-MS), ALOX12B (Affinity Capture-MS), UBXN6 (Co-fractionation), DNAL1 (Affinity Capture-MS)
ESM2 similar proteins: A0A096MJZ0, D0MYB4, O35125, O94489, P09661, P0C895, P11745, P22194, P36047, P41391, P43333, P45969, P57784, Q05A62, Q08963, Q15435, Q28G94, Q2KID4, Q32PL1, Q3T0W4, Q3UM45, Q4LDG9, Q4P5F9, Q4R8Y8, Q4V8D9, Q4WV66, Q54Q39, Q5BGW9, Q5FVQ9, Q5HZV9, Q5RFS7, Q5U378, Q5U508, Q641R9, Q6BT60, Q6C417, Q6DHB1, Q6DIQ3, Q6GPJ5, Q7S9P4
Diamond homologs: A0A096MJZ0, Q05A62, Q28G94, Q2KID4, Q4LDG9, Q641R9, Q6DHB1, Q8T888, Q9XHH2, Q5PQJ7, Q5QJ74, Q84WJ9, Q8C5W3
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
152 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 7 |
| Likely pathogenic | 4 |
| Uncertain significance | 40 |
| Likely benign | 62 |
| Benign | 23 |
Top pathogenic / likely-pathogenic (11)
| Variant ID | HGVS | Classification |
|---|---|---|
| 2426971 | NC_000014.8:g.(?74153942)(74156238_?)del | Pathogenic |
| 2671843 | NM_031427.4(DNAL1):c.23_24del (p.Lys8fs) | Pathogenic |
| 2955850 | NM_031427.4(DNAL1):c.296G>A (p.Trp99Ter) | Pathogenic |
| 30816 | NM_031427.4(DNAL1):c.449A>G (p.Asn150Ser) | Pathogenic |
| 406527 | NM_031427.4(DNAL1):c.486G>A (p.Trp162Ter) | Pathogenic |
| 406536 | NM_031427.4(DNAL1):c.384del (p.Asp129fs) | Pathogenic |
| 662859 | NC_000014.9:g.(?73671522)(73671617_?)del | Pathogenic |
| 3576682 | NM_031427.4(DNAL1):c.151G>T (p.Glu51Ter) | Likely pathogenic |
| 3576683 | NM_031427.4(DNAL1):c.438_439dup (p.Phe147fs) | Likely pathogenic |
| 3576684 | NM_031427.4(DNAL1):c.490G>T (p.Glu164Ter) | Likely pathogenic |
| 4294414 | NM_031427.4(DNAL1):c.527T>C (p.Leu176Pro) | Likely pathogenic |
SpliceAI
1430 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 14:73658953:GCGA:G | donor_gain | 1.0000 |
| 14:73658954:CGA:C | donor_gain | 1.0000 |
| 14:73658954:CGAG:C | donor_loss | 1.0000 |
| 14:73658955:GA:G | donor_gain | 1.0000 |
| 14:73658955:GAG:G | donor_gain | 1.0000 |
| 14:73658956:AG:A | donor_loss | 1.0000 |
| 14:73658957:G:GG | donor_gain | 1.0000 |
| 14:73658958:TAA:T | donor_loss | 1.0000 |
| 14:73661983:A:AG | acceptor_gain | 1.0000 |
| 14:73662043:G:GG | donor_gain | 1.0000 |
| 14:73671535:A:AG | acceptor_gain | 1.0000 |
| 14:73671536:C:G | acceptor_gain | 1.0000 |
| 14:73671536:CTACA:C | acceptor_loss | 1.0000 |
| 14:73671537:TACAG:T | acceptor_loss | 1.0000 |
| 14:73671538:ACAG:A | acceptor_loss | 1.0000 |
| 14:73671539:CA:C | acceptor_loss | 1.0000 |
| 14:73671540:A:AG | acceptor_gain | 1.0000 |
| 14:73671540:A:AT | acceptor_loss | 1.0000 |
| 14:73671541:G:GG | acceptor_gain | 1.0000 |
| 14:73671541:GA:G | acceptor_gain | 1.0000 |
| 14:73671593:GACTG:G | donor_gain | 1.0000 |
| 14:73671594:ACTGG:A | donor_loss | 1.0000 |
| 14:73671596:TGGT:T | donor_loss | 1.0000 |
| 14:73671597:GGTA:G | donor_loss | 1.0000 |
| 14:73671598:G:A | donor_loss | 1.0000 |
| 14:73671599:TAG:T | donor_loss | 1.0000 |
| 14:73687157:GGTC:G | donor_gain | 1.0000 |
| 14:73687254:TTCA:T | acceptor_loss | 1.0000 |
| 14:73687255:TCA:T | acceptor_loss | 1.0000 |
| 14:73687256:CA:C | acceptor_loss | 1.0000 |
AlphaMissense
1254 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 14:73662008:C:A | N58K | 0.999 |
| 14:73662008:C:G | N58K | 0.999 |
| 14:73671572:A:T | N80I | 0.999 |
| 14:73671573:C:A | N80K | 0.999 |
| 14:73671573:C:G | N80K | 0.999 |
| 14:73687287:T:C | L98P | 0.999 |
| 14:73687303:T:A | N103K | 0.999 |
| 14:73687303:T:G | N103K | 0.999 |
| 14:73687369:C:A | N125K | 0.999 |
| 14:73687369:C:G | N125K | 0.999 |
| 14:73661992:T:C | L53P | 0.998 |
| 14:73671548:T:C | L72S | 0.998 |
| 14:73671548:T:G | L72W | 0.998 |
| 14:73671557:T:C | L75S | 0.998 |
| 14:73671569:G:C | R79T | 0.998 |
| 14:73687278:T:C | L95S | 0.998 |
| 14:73689417:T:C | L145P | 0.998 |
| 14:73689433:T:A | N150K | 0.998 |
| 14:73689433:T:G | N150K | 0.998 |
| 14:73658954:C:G | C50W | 0.997 |
| 14:73661992:T:A | L53H | 0.997 |
| 14:73661994:T:C | S54P | 0.997 |
| 14:73661998:T:C | L55P | 0.997 |
| 14:73671559:T:C | S76P | 0.997 |
| 14:73671569:G:T | R79I | 0.997 |
| 14:73671570:A:C | R79S | 0.997 |
| 14:73671570:A:T | R79S | 0.997 |
| 14:73671571:A:G | N80D | 0.997 |
| 14:73687296:C:T | S101F | 0.997 |
| 14:73687301:A:T | N103Y | 0.997 |
dbSNP variants (sampled 300 via entrez): RS1000111626 (14:73643300 C>A), RS1000134977 (14:73686477 G>A), RS1000173245 (14:73688061 C>T), RS1000201755 (14:73679741 G>A), RS1000263724 (14:73684848 T>C), RS1000394152 (14:73665539 C>T), RS1000422214 (14:73647226 G>A), RS1000509703 (14:73677037 C>T), RS1000525274 (14:73675384 A>G), RS1000532471 (14:73681815 T>A), RS1000591821 (14:73674162 T>A), RS1000613909 (14:73683347 T>C), RS1000705797 (14:73668929 G>A), RS1000752058 (14:73645420 G>A), RS1000889723 (14:73662733 T>C)
Disease associations
OMIM: gene MIM:610062 | disease phenotypes: MIM:614017, MIM:244400
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| primary ciliary dyskinesia 16 | Strong | Autosomal recessive |
| primary ciliary dyskinesia | Supportive | Autosomal dominant |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| primary ciliary dyskinesia 16 | Definitive | AR |
Mondo (3): primary ciliary dyskinesia 16 (MONDO:0013525), primary ciliary dyskinesia (MONDO:0016575), primary ciliary dyskinesia 1 (MONDO:0009484)
Orphanet (2): Primary ciliary dyskinesia (Orphanet:244), Primary ciliary dyskinesia, Kartagener type (Orphanet:98861)
HPO phenotypes
53 total (30 of 53 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000119 | Abnormality of the genitourinary system |
| HP:0000238 | Hydrocephalus |
| HP:0000365 | Hearing impairment |
| HP:0000389 | Chronic otitis media |
| HP:0000403 | Recurrent otitis media |
| HP:0000405 | Conductive hearing impairment |
| HP:0000510 | Rod-cone dystrophy |
| HP:0000750 | Delayed speech and language development |
| HP:0000924 | Abnormality of the skeletal system |
| HP:0001217 | Clubbing |
| HP:0001627 | Abnormal heart morphology |
| HP:0001669 | Transposition of the great arteries |
| HP:0001696 | Situs inversus totalis |
| HP:0001719 | Double outlet right ventricle |
| HP:0001742 | Nasal congestion |
| HP:0001746 | Asplenia |
| HP:0001748 | Polysplenia |
| HP:0002011 | Morphological central nervous system abnormality |
| HP:0002110 | Bronchiectasis |
| HP:0002119 | Ventriculomegaly |
| HP:0002257 | Chronic rhinitis |
| HP:0002566 | Intestinal malrotation |
| HP:0002643 | Neonatal respiratory distress |
| HP:0002878 | Respiratory failure |
| HP:0003251 | Male infertility |
| HP:0003623 | Neonatal onset |
| HP:0005301 | Persistent left superior vena cava |
| HP:0005425 | Recurrent sinopulmonary infections |
| HP:0006536 | Airway obstruction |
GWAS associations
0 associations (top):
MeSH disease descriptors (2)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D002925 | Ciliary Motility Disorders | C08.200; C09.150; C16.131.077.245.500; C16.320.184.500 |
| D007619 | Kartagener Syndrome | C08.127.384.500; C08.200.531; C08.695.501; C09.150.531; C14.240.400.280.500; C14.280.400.280.500; C16.131.077.245.500.531; C16.131.240.400.280.500; C16.131.740.501; C16.131.810.250.500; C16.320.184.500.531; C16.320.480 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
20 total (human), top 20 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Tobacco Smoke Pollution | decreases expression | 2 |
| triphenyl phosphate | affects expression | 1 |
| bisphenol A | affects cotreatment, increases methylation | 1 |
| arsenite | affects binding, increases reaction | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | increases expression | 1 |
| corosolic acid | increases expression | 1 |
| bisphenol S | affects cotreatment, increases expression | 1 |
| jinfukang | decreases expression | 1 |
| Resveratrol | affects cotreatment, increases expression | 1 |
| Fulvestrant | affects cotreatment, increases methylation | 1 |
| Acetaminophen | increases expression | 1 |
| Dexamethasone | affects cotreatment, increases expression | 1 |
| Indomethacin | affects cotreatment, increases expression | 1 |
| Lead | decreases expression | 1 |
| Methyl Methanesulfonate | increases expression | 1 |
| Phthalic Acids | affects methylation | 1 |
| Plant Extracts | affects cotreatment, increases expression | 1 |
| Valproic Acid | increases methylation | 1 |
| 1-Methyl-3-isobutylxanthine | affects cotreatment, increases expression | 1 |
| Cyclosporine | increases expression | 1 |
Clinical trials (associated diseases)
71 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT02871778 | PHASE2 | COMPLETED | Clearing Lungs With ENaC Inhibition in Primary Ciliary Dyskinesia |
| NCT07318974 | PHASE2 | ACTIVE_NOT_RECRUITING | Melatonin Therapy for Improving ICSI Outcomes in Women With Diminished Ovarian Reserve |
| NCT05737485 | PHASE1 | COMPLETED | Study Evaluating the Safety and Tolerability of RCT1100 in Healthy and PCD Subjects |
| NCT06600425 | PHASE1 | COMPLETED | A Study to Assess the Safety, Tolerability, Ciliary Rescue, and Pharmacodynamics of RCT1100 in Adults With PCD |
| NCT06633757 | PHASE1 | COMPLETED | Study of Inhaled RCT1100 in Adults With PCD Caused by Pathogenic Mutations in the DNAI1 Gene to Measure Mucociliary Clearance |
| NCT04901715 | EARLY_PHASE1 | COMPLETED | Functional Studies of Novel Genes Mutated in Primary Ciliary Dyskinesia II: Genotype to Phenotype |
| NCT00005650 | Not specified | COMPLETED | Genetic Study of Patients With Primary Ciliary Dyskinesia |
| NCT00323167 | Not specified | COMPLETED | Rare Genetic Disorders of the Breathing Airways |
| NCT00368446 | Not specified | COMPLETED | Genetic Disorders of Mucociliary Clearance in Nontuberculous Mycobacterial Lung Disease |
| NCT00450918 | Not specified | COMPLETED | Evaluating Progression of and Diagnostic Tools for Primary Ciliary Dyskinesia in Children and Adolescents |
| NCT00608556 | Not specified | COMPLETED | Dyskinesia, Heterotaxy and Congenital Heart Disease |
| NCT00686309 | Not specified | UNKNOWN | Comparison of On-line and Off-line Measurements of Exhaled Nitric Oxide (NO) |
| NCT00722878 | Not specified | COMPLETED | Long-term Lung Function and Disease Progression in Children With Early Onset Primary Ciliary Dyskinesia Lung Disease |
| NCT00739817 | Not specified | UNKNOWN | Screening for Primary Ciliary Dyskinesia Using Nasal Nitric Oxide |
| NCT00783887 | Not specified | COMPLETED | Diagnosis of Primary Ciliary Dyskinesia |
| NCT00807482 | Not specified | RECRUITING | Pathogenesis of Primary Ciliary Dyskinesia (PCD) Lung Disease |
| NCT01070914 | Not specified | UNKNOWN | Early Detection and Characterization of Primary Ciliary Dyskinesia |
| NCT01155115 | Not specified | COMPLETED | Inflammatory and Microbiologic Markers in Sputum: Comparing Cystic Fibrosis With Primary Ciliary Dyskinesia |
| NCT01246258 | Not specified | COMPLETED | Otolith Function in Patients With Primary Ciliary Dyskinesia |
| NCT01929356 | Not specified | RECRUITING | Chest Physiotherapy and Lung Function in Primary Ciliary Dyskinesia |
| NCT02389049 | Not specified | COMPLETED | Genetics of Primary Ciliary Dyskinesia |
| NCT02419365 | Not specified | RECRUITING | International Primary Ciliary Dyskinesia (PCD) Registry |
| NCT02699177 | Not specified | UNKNOWN | In Vivo Measurements of Nasal Ciliary Beat Frequency by Using Interferometry |
| NCT02704455 | Not specified | NOT_YET_RECRUITING | Registry Study on Primary Ciliary Dyskinesia in Chinese Children |
| NCT03271840 | Not specified | COMPLETED | Registry for Primary Ciliary Dyskinesia |
| NCT03279965 | Not specified | UNKNOWN | MRI in Cystic Fibrosis and Primary Ciliary Dyskinesia |
| NCT03320382 | Not specified | UNKNOWN | Multiple Breath Washout, a Clinimetric Dataset |
| NCT03370029 | Not specified | COMPLETED | Respiratory Muscle Strength, Exercise Capacity and Physical Activity Levels in Children Primary Ciliary Dyskinesia |
| NCT03494894 | Not specified | COMPLETED | Bacteriological Link Between Upper and Lower Airways in Cystic Fibrosis and Primary Ciliary Dyskinesia |
| NCT03517865 | Not specified | ACTIVE_NOT_RECRUITING | International Primary Ciliary Dyskinesia Cohort |
| NCT03606200 | Not specified | RECRUITING | Swiss Primary Ciliary Dyskinesia Registry |
| NCT03704207 | Not specified | RECRUITING | Utility of PCD Diagnostics to Improve Clinical Care |
| NCT03704896 | Not specified | UNKNOWN | PRospective Observational Multicentre Study on VAriability of Lung Function in Stable PCD Patients |
| NCT03801395 | Not specified | COMPLETED | PCD New Gene Discovery |
| NCT03809091 | Not specified | UNKNOWN | WGS of Korean Idiopathic Bronchiectasis |
| NCT03832491 | Not specified | COMPLETED | Effect of Game Based Approach on Oxygenation, Functional Capacity and Quality of Life in Primary Ciliary Dyskinesia |
| NCT04161313 | Not specified | COMPLETED | Respiratory Function, Exercise Capacity and Peripheral Muscle Strength Among Patients With CF, PCD and Healthy Children |
| NCT04476433 | Not specified | COMPLETED | Intervention in Chronic Pediatric Patients and Their Families. |
| NCT04489472 | Not specified | UNKNOWN | The Effect of a Dietary Supplement Rich in Nitric Oxide in Patients Diagnosed With Primary Ciliary Dyskinesia. |
| NCT04602481 | Not specified | RECRUITING | Living With Primary Ciliary Dyskinesia (Living With PCD) |
Related Atlas pages
- Associated diseases: primary ciliary dyskinesia 16, primary ciliary dyskinesia
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): primary ciliary dyskinesia, primary ciliary dyskinesia 1, primary ciliary dyskinesia 16