DOCK9-DT

Summary

DOCK9-DT (DOCK9 divergent transcript, HGNC:43696) is a long non-coding RNA gene on chromosome 13q32.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:43696
Approved symbol	DOCK9-DT
Name	DOCK9 divergent transcript
Location	13q32.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000260992
Ensembl biotype	lncRNA
Entrez	100861541
RNAcentral	URS000075D247 — lncRNA, 1903 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000562781

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000562781 — 1 exons

Exon	Start	End
ENSE00002597675	99087819	99088625

Expression profiles

Bgee: expression breadth ubiquitous, 168 present calls, max score 97.67.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0677 / max 12.7647, expressed in 23 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
135788	0.0677	23

Top tissues by expression

244 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	97.67	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.85	gold quality
lower esophagus mucosa	UBERON:0035834	81.64	gold quality
calcaneal tendon	UBERON:0003701	80.73	gold quality
skin of leg	UBERON:0001511	79.35	gold quality
esophagus mucosa	UBERON:0002469	78.92	gold quality
left testis	UBERON:0004533	78.72	gold quality
right testis	UBERON:0004534	78.59	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	77.95	gold quality
esophagus squamous epithelium	UBERON:0006920	77.47	gold quality
sperm	CL:0000019	77.36	silver quality
esophagus	UBERON:0001043	77.13	gold quality
mucosa of stomach	UBERON:0001199	76.91	gold quality
skin of abdomen	UBERON:0001416	76.91	gold quality
tibial artery	UBERON:0007610	76.47	gold quality
popliteal artery	UBERON:0002250	76.45	gold quality
zone of skin	UBERON:0000014	76.15	gold quality
lower esophagus	UBERON:0013473	75.81	gold quality
gingival epithelium	UBERON:0001949	75.80	gold quality
lower esophagus muscularis layer	UBERON:0035833	75.76	gold quality
descending thoracic aorta	UBERON:0002345	75.69	gold quality
testis	UBERON:0000473	75.62	gold quality
aorta	UBERON:0000947	75.44	gold quality
parotid gland	UBERON:0001831	74.76	silver quality
thoracic aorta	UBERON:0001515	74.57	gold quality
right lung	UBERON:0002167	74.49	gold quality
ascending aorta	UBERON:0001496	74.43	gold quality
right hemisphere of cerebellum	UBERON:0014890	73.64	gold quality
cerebellar hemisphere	UBERON:0002245	73.47	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	73.43	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	4.07

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.