DPAGT1
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Also known as GPTD11S366DGPTALG7CDG-Ij
Summary
DPAGT1 (dolichyl-phosphate N-acetylglucosaminephosphotransferase 1, HGNC:2995) is a protein-coding gene on chromosome 11q23.3, encoding UDP-N-acetylglucosamine–dolichyl-phosphate N-acetylglucosaminephosphotransferase (Q9H3H5). UDP-N-acetylglucosamine–dolichyl-phosphate N-acetylglucosaminephosphotransferase that operates in the biosynthetic pathway of dolichol-linked oligosaccharides, the glycan precursors employed in protein asparagine (N)-glycosylation. It is a common-essential gene (DepMap: required in 98.3% of cancer cell lines).
The protein encoded by this gene is an enzyme that catalyzes the first step in the dolichol-linked oligosaccharide pathway for glycoprotein biosynthesis. This enzyme belongs to the glycosyltransferase family 4. This protein is an integral membrane protein of the endoplasmic reticulum. The congenital disorder of glycosylation type Ij is caused by mutation in the gene encoding this enzyme.
Source: NCBI Gene 1798 — RefSeq curated summary.
At a glance
- Gene–disease (curated): DPAGT1-congenital disorder of glycosylation (Definitive, ClinGen) — +2 more curated relationships
- GWAS associations: 4
- Clinical variants (ClinVar): 344 total — 13 pathogenic, 20 likely-pathogenic
- Phenotypes (HPO): 123
- Druggable target: yes
- Cancer dependency (DepMap): dependent in 98.3% of screened cell lines (common-essential)
- Dosage sensitivity (ClinGen): haploinsufficiency autosomal recessive, triplosensitivity no evidence
- MANE Select transcript:
NM_001382
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:2995 |
| Approved symbol | DPAGT1 |
| Name | dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 |
| Location | 11q23.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | GPT, D11S366, DGPT, ALG7, CDG-Ij |
| Ensembl gene | ENSG00000172269 |
| Ensembl biotype | protein_coding |
| OMIM | 191350 |
| Entrez | 1798 |
Gene structure
Transcript identifiers
Ensembl transcripts: 52 — 23 retained_intron, 16 nonsense_mediated_decay, 13 protein_coding
ENST00000354202, ENST00000392834, ENST00000409993, ENST00000414373, ENST00000442480, ENST00000445653, ENST00000460183, ENST00000461999, ENST00000472016, ENST00000481084, ENST00000524658, ENST00000525456, ENST00000530052, ENST00000533687, ENST00000636404, ENST00000638850, ENST00000639704, ENST00000640102, ENST00000640747, ENST00000682191, ENST00000682192, ENST00000682232, ENST00000682326, ENST00000682404, ENST00000682517, ENST00000682652, ENST00000682665, ENST00000682691, ENST00000682791, ENST00000682811, ENST00000682883, ENST00000682946, ENST00000683143, ENST00000683373, ENST00000683558, ENST00000683567, ENST00000683955, ENST00000684142, ENST00000684252, ENST00000684255, ENST00000684315, ENST00000684345, ENST00000684499, ENST00000684682, ENST00000867497, ENST00000867498, ENST00000938549, ENST00000938550, ENST00000938551, ENST00000945326, ENST00000945327, ENST00000945328
RefSeq mRNA: 1 — MANE Select: NM_001382
NM_001382
CCDS: CCDS8411
Canonical transcript exons
ENST00000354202 — 9 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001260143 | 119101018 | 119101138 |
| ENSE00001581587 | 119096510 | 119097063 |
| ENSE00002155852 | 119101495 | 119101853 |
| ENSE00003529452 | 119097855 | 119098043 |
| ENSE00003552320 | 119100262 | 119100408 |
| ENSE00003596267 | 119097142 | 119097297 |
| ENSE00003620217 | 119100630 | 119100843 |
| ENSE00003639998 | 119098403 | 119098487 |
| ENSE00003682245 | 119097464 | 119097551 |
Expression profiles
Bgee: expression breadth ubiquitous, 271 present calls, max score 95.53.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 34.9320 / max 222.3272, expressed in 1808 samples.
FANTOM5 promoters (6 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 122693 | 24.4902 | 1798 |
| 122694 | 9.0413 | 1760 |
| 122691 | 0.7388 | 436 |
| 122692 | 0.2993 | 119 |
| 122690 | 0.2002 | 70 |
| 122689 | 0.1622 | 58 |
Top tissues by expression
294 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| mucosa of transverse colon | UBERON:0004991 | 95.53 | gold quality |
| body of pancreas | UBERON:0001150 | 95.50 | gold quality |
| right adrenal gland | UBERON:0001233 | 93.97 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 93.80 | gold quality |
| stromal cell of endometrium | CL:0002255 | 93.73 | gold quality |
| left adrenal gland | UBERON:0001234 | 93.30 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 93.22 | gold quality |
| right lobe of liver | UBERON:0001114 | 92.71 | gold quality |
| pancreas | UBERON:0001264 | 92.69 | gold quality |
| right uterine tube | UBERON:0001302 | 92.68 | gold quality |
| adrenal cortex | UBERON:0001235 | 92.52 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 92.17 | gold quality |
| rectum | UBERON:0001052 | 92.15 | gold quality |
| body of stomach | UBERON:0001161 | 92.02 | gold quality |
| adrenal gland | UBERON:0002369 | 91.64 | gold quality |
| transverse colon | UBERON:0001157 | 91.52 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 91.49 | gold quality |
| endocervix | UBERON:0000458 | 91.44 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 91.40 | gold quality |
| islet of Langerhans | UBERON:0000006 | 91.33 | gold quality |
| esophagus mucosa | UBERON:0002469 | 91.31 | gold quality |
| metanephros cortex | UBERON:0010533 | 91.27 | gold quality |
| minor salivary gland | UBERON:0001830 | 91.26 | gold quality |
| saliva-secreting gland | UBERON:0001044 | 91.16 | gold quality |
| granulocyte | CL:0000094 | 90.96 | gold quality |
| body of uterus | UBERON:0009853 | 90.85 | gold quality |
| esophagus | UBERON:0001043 | 90.79 | gold quality |
| adenohypophysis | UBERON:0002196 | 90.72 | gold quality |
| omental fat pad | UBERON:0010414 | 90.53 | gold quality |
| peritoneum | UBERON:0002358 | 90.52 | gold quality |
Single-cell (SCXA)
Detected in 3 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 11.59 |
| E-MTAB-4850 | no | 462.62 |
| E-MTAB-6379 | no | 461.11 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): NR3C1, STAT5A, STAT5B
miRNA regulators (miRDB)
33 targeting DPAGT1, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4668-3P | 100.00 | 68.74 | 2635 |
| HSA-MIR-589-3P | 99.91 | 69.62 | 2088 |
| HSA-MIR-8063 | 99.91 | 69.76 | 3146 |
| HSA-MIR-765 | 99.84 | 68.24 | 2442 |
| HSA-MIR-8080 | 99.82 | 67.52 | 1342 |
| HSA-MIR-11181-3P | 99.75 | 66.38 | 2205 |
| HSA-MIR-199A-3P | 99.75 | 70.48 | 929 |
| HSA-MIR-199B-3P | 99.75 | 70.48 | 929 |
| HSA-MIR-3129-5P | 99.75 | 70.46 | 914 |
| HSA-MIR-4306 | 99.72 | 70.50 | 3630 |
| HSA-MIR-4663 | 99.62 | 65.33 | 957 |
| HSA-MIR-516B-5P | 99.56 | 66.33 | 1495 |
| HSA-MIR-185-5P | 99.35 | 68.60 | 2497 |
| HSA-MIR-4644 | 99.35 | 69.12 | 2514 |
| HSA-MIR-2115-3P | 99.31 | 69.68 | 2026 |
| HSA-MIR-5584-3P | 99.23 | 68.79 | 1351 |
| HSA-MIR-8077 | 99.17 | 66.67 | 862 |
| HSA-MIR-146A-3P | 99.13 | 68.99 | 1881 |
| HSA-MIR-7160-5P | 99.11 | 67.17 | 2207 |
| HSA-MIR-485-5P | 99.10 | 64.78 | 1889 |
| HSA-MIR-6884-5P | 99.10 | 64.50 | 1987 |
| HSA-MIR-5701 | 98.97 | 69.54 | 1502 |
| HSA-MIR-1294 | 98.91 | 69.26 | 1030 |
| HSA-MIR-9986 | 98.91 | 69.28 | 1024 |
| HSA-MIR-6818-3P | 98.56 | 68.23 | 1307 |
| HSA-MIR-376B-5P | 98.46 | 66.40 | 606 |
| HSA-MIR-376C-5P | 98.46 | 66.64 | 589 |
| HSA-MIR-4733-5P | 97.75 | 67.44 | 866 |
| HSA-MIR-4714-5P | 97.04 | 67.76 | 955 |
| HSA-MIR-34A-3P | 96.80 | 67.70 | 805 |
Functional genomics
ClinGen dosage: haploinsufficiency 30 (autosomal recessive), triplosensitivity 0 (no evidence). ClinGen Gene Dosage Map
DepMap (CRISPR cell-line fitness): dependent in 98.3% of screened cell lines, common-essential.
Literature-anchored findings (GeneRIF, showing 20)
- REVIEW: Structure, expression, and regulation (PMID:19519349)
- Studies show for the first time that DPAGT1 is an upstream regulator of E-cadherin N-glycosylation status and adherens junction composition and suggest that dysregulation of DPAGT1 causes disturbances in intercellular adhesion in oral cancer. (PMID:19549906)
- up-regulation of DPAGT1 transcripts by Wnt3a led to altered N-glycosylation of E-cadherin. (PMID:20693288)
- Mutations in DPAGT1 gene is associated with Congenital disorder of glycosylation type Ij. (PMID:22304930)
- Overexpression of DPAGT1 in human oral squamous cell carcinoma specimens is linked to aberrant activation of canonical Wnt signaling. (PMID:22341307)
- We identify DPAGT1 as a gene in which mutations cause a congenital myasthenic syndrome. (PMID:22742743)
- Studies show that cells coordinate DPAGT1 expression and protein N-glycosylation with canonical Wnt signaling and E-cadherin adhesion via positive and negative feedback mechanisms. (PMID:23178939)
- Results indicate that the clinical spectrum of dolichyl-phosphate alpha-N-acetylglucosaminyltransferase (DPAGT1)-congenital disorders of glycosylation (CDG) is much broader than appreciated so far. (PMID:23249953)
- suggest that the primary pathogenic mechanism of DPAGT1-associated CMS is reduced levels of AChRs at the endplate region. This finding demonstrates that impairment of the N-linked glycosylation pathway can lead to the development of CMS (PMID:23278575)
- Patients with DPAGT1 CMS share similar clinical features with patients who have CMS caused by mutations in GFPT1, another recently identified CMS subtype. (PMID:23447650)
- prominent limb-girdle weakness and minimal craniobulbar symptoms who harbour a novel mutation in DPAGT1 (PMID:23591138)
- Data suggest that in oral squamous cell carcinoma (OSCC), dysregulation of canonical Wnt signaling and DPAGT1-dependent N-glycosylation induces CTHRC1, thereby driving OSCC cell migration and tumor spread. (PMID:23703614)
- Data suggest that N-acetylglucosaminyl 1-phosphate transferase is a breast cancer therapeutic target. (PMID:25408354)
- present work improves our knowledge of DPAGT1-CDG and provides bases for developing tailored splicing and folding therapies (PMID:28662078)
- we studied serum asialotransferrin (2009), which revealed a type 1 pattern compatible with type 1 glycosylation. Diagnosis of DPAGT1-CDG was confirmed by massive sequencing, which identified 2 mutations: c.329T>C (p.Phe110Ser, which had not previously been described), and c.902G>A (p.Arg301His) in the DPAGT1 gene. (PMID:28712839)
- Congenital glycosylation disorder: a novel presentation of coexisting anterior and posterior segment pathology and its implications in pediatric cataract management. (PMID:31153949)
- LncRNA LINC00467 acted as an oncogene in esophageal squamous cell carcinoma by accelerating cell proliferation and preventing cell apoptosis via the miR-485-5p/DPAGT1 axis. (PMID:32720371)
- NFAT5 promotes oral squamous cell carcinoma progression in a hyperosmotic environment. (PMID:32901097)
- Novel DPAGT1 Gene Mutation in Two Twins with Congenital Myasthenic Syndrome and a Review of the Literature. (PMID:37005892)
- DPAGT1-CDG: Recurrent fetal death. (PMID:37421173)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | dpagt1 | ENSDARG00000061061 |
| mus_musculus | Dpagt1 | ENSMUSG00000032123 |
| rattus_norvegicus | Dpagt1 | ENSRNOG00000009799 |
| drosophila_melanogaster | Alg7 | FBGN0032477 |
| caenorhabditis_elegans | WBGENE00013362 |
Protein
Protein identifiers
UDP-N-acetylglucosamine–dolichyl-phosphate N-acetylglucosaminephosphotransferase — Q9H3H5 (reviewed: Q9H3H5)
Alternative names: GlcNAc-1-P transferase, N-acetylglucosamine-1-phosphate transferase
All UniProt accessions (16): A0A1B0GV58, A0A1W2PPC6, A0A1W2PQD1, A0A1W2PQH0, A0A1W2PRR6, A0A804HHX1, A0A804HI18, A0A804HIP7, A0A804HJ11, A0A804HJ22, Q9H3H5, A0A804HKZ3, A0A804HL46, F8W681, F8WE55, H7C2L6
UniProt curated annotations — full annotation on UniProt →
Function. UDP-N-acetylglucosamine–dolichyl-phosphate N-acetylglucosaminephosphotransferase that operates in the biosynthetic pathway of dolichol-linked oligosaccharides, the glycan precursors employed in protein asparagine (N)-glycosylation. The assembly of dolichol-linked oligosaccharides begins on the cytosolic side of the endoplasmic reticulum membrane and finishes in its lumen. The sequential addition of sugars to dolichol pyrophosphate produces dolichol-linked oligosaccharides containing fourteen sugars, including two GlcNAcs, nine mannoses and three glucoses. Once assembled, the oligosaccharide is transferred from the lipid to nascent proteins by oligosaccharyltransferases. Catalyzes the initial step of dolichol-linked oligosaccharide biosynthesis, transferring GlcNAc-1-P from cytosolic UDP-GlcNAc onto the carrier lipid dolichyl phosphate (P-dolichol), yielding GlcNAc-P-P-dolichol embedded in the cytoplasmic leaflet of the endoplasmic reticulum membrane.
Subunit / interactions. Homodimer.
Subcellular location. Endoplasmic reticulum membrane.
Disease relevance. Congenital disorder of glycosylation 1J (CDG1J) [MIM:608093] A form of congenital disorder of glycosylation, a multisystem disorder caused by a defect in glycoprotein biosynthesis and characterized by under-glycosylated serum glycoproteins. Congenital disorders of glycosylation result in a wide variety of clinical features, such as defects in the nervous system development, psychomotor retardation, dysmorphic features, hypotonia, coagulation disorders, and immunodeficiency. The broad spectrum of features reflects the critical role of N-glycoproteins during embryonic development, differentiation, and maintenance of cell functions. The disease is caused by variants affecting the gene represented in this entry. Myasthenic syndrome, congenital, 13 (CMS13) [MIM:614750] A form of congenital myasthenic syndrome, a group of disorders characterized by failure of neuromuscular transmission, including pre-synaptic, synaptic, and post-synaptic disorders that are not of autoimmune origin. Clinical features are easy fatigability and muscle weakness. CMS13 is characterized by muscle weakness mostly affecting proximal limb muscles, minimal involvement of facial, ocular and bulbar muscles, and tubular aggregates present on muscle biopsy. Symptoms include difficulty walking and frequent falls. Younger patients show hypotonia and poor head control. Neurophysiological features indicate a disorder of neuromuscular transmission on electromyography. The disease is caused by variants affecting the gene represented in this entry.
Activity regulation. Inhibited by natural nucleoside antibiotic tunicamycin, which acts as a structural analog and competitor of UDP-GlcNAc. Activated by mannosylphosphoryldolichol and phospholipids such as phosphatidylglycerol and phosphatidylcholine.
Pathway. Protein modification; protein glycosylation.
Similarity. Belongs to the glycosyltransferase 4 family.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q9H3H5-1 | 1 | yes |
| Q9H3H5-2 | 2 | |
| Q9H3H5-3 | 3 |
RefSeq proteins (1): NP_001373* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000715 | Glycosyl_transferase_4 | Family |
| IPR033895 | GPT | Family |
| IPR048439 | DPAGT1_ins | Domain |
Pfam: PF00953, PF21383
Enzyme classification (BRENDA):
- EC 2.7.8.15 — UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase (BRENDA: 15 organisms, 17 substrates, 34 inhibitors, 14 Km, 0 kcat entries)
Substrate kinetics (BRENDA)
2 substrates with measured Km, best-characterized 2. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| DOLICHYL PHOSPHATE | 0.0007–0.18 | 7 |
| UDP-GLCNAC | 0.0001–0.015 | 6 |
Catalyzed reactions (Rhea), 1 shown:
- a di-trans,poly-cis-dolichyl phosphate + UDP-N-acetyl-alpha-D-glucosamine = an N-acetyl-alpha-D-glucosaminyl-diphospho-di-trans,poly-cis-dolichol + UMP (RHEA:13289)
UniProt features (95 total): mutagenesis site 18, helix 16, binding site 13, topological domain 11, transmembrane region 10, sequence variant 9, strand 9, turn 3, splice variant 2, sequence conflict 2, chain 1, glycosylation site 1
Structure
Experimental structures (PDB)
8 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 6JQ3 | X-RAY DIFFRACTION | 2.5 |
| 9ZNN | ELECTRON MICROSCOPY | 2.9 |
| 6BW6 | X-RAY DIFFRACTION | 2.95 |
| 6BW5 | X-RAY DIFFRACTION | 3.1 |
| 6FWZ | X-RAY DIFFRACTION | 3.1 |
| 5LEV | X-RAY DIFFRACTION | 3.2 |
| 5O5E | X-RAY DIFFRACTION | 3.4 |
| 6FM9 | X-RAY DIFFRACTION | 3.6 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q9H3H5-F1 | 94.50 | 0.88 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (13): 44–46; 46; 56; 119; 125; 178–186; 185; 185; 191; 252; 252; 301–303 …
Glycosylation sites (1): 146
Mutagenesis-validated functional residues (18):
| Position | Phenotype |
|---|---|
| 30 | mildly reduced udp-n-acetylglucosamine-dolichyl-phosphate n-acetylglucosaminephosphotransferase activity. |
| 69 | no significant effect on udp-n-acetylglucosamine-dolichyl-phosphate n-acetylglucosaminephosphotransferase activity. |
| 103 | impairs protein stability. |
| 114 | no significant effect on udp-n-acetylglucosamine-dolichyl-phosphate n-acetylglucosaminephosphotransferase activity. |
| 115 | strongly reduced udp-n-acetylglucosamine-dolichyl-phosphate n-acetylglucosaminephosphotransferase activity. |
| 115 | mildly reduced udp-n-acetylglucosamine-dolichyl-phosphate n-acetylglucosaminephosphotransferase activity. |
| 116 | strongly reduced udp-n-acetylglucosamine-dolichyl-phosphate n-acetylglucosaminephosphotransferase activity. |
| 122 | strongly reduced udp-n-acetylglucosamine-dolichyl-phosphate n-acetylglucosaminephosphotransferase activity. |
| 125 | loss of udp-n-acetylglucosamine-dolichyl-phosphate n-acetylglucosaminephosphotransferase activity. |
| 168 | strongly reduced udp-n-acetylglucosamine-dolichyl-phosphate n-acetylglucosaminephosphotransferase activity. |
| 182 | loss of udp-n-acetylglucosamine-dolichyl-phosphate n-acetylglucosaminephosphotransferase activity. |
| 185 | loss of udp-n-acetylglucosamine-dolichyl-phosphate n-acetylglucosaminephosphotransferase activity. |
| 252 | reduces binding to inhibitor. nearly abolishes udp-n-acetylglucosamine-dolichyl-phosphate n-acetylglucosaminephosphotran |
| 264 | no significant effect on udp-n-acetylglucosamine-dolichyl-phosphate n-acetylglucosaminephosphotransferase activity. |
| 301 | loss of udp-n-acetylglucosamine-dolichyl-phosphate n-acetylglucosaminephosphotransferase activity. |
| 302 | loss of udp-n-acetylglucosamine-dolichyl-phosphate n-acetylglucosaminephosphotransferase activity. |
| 303 | reduced udp-n-acetylglucosamine-dolichyl-phosphate n-acetylglucosaminephosphotransferase activity. |
| 385 | no significant effect on udp-n-acetylglucosamine-dolichyl-phosphate n-acetylglucosaminephosphotransferase activity. |
Function
Pathways and Gene Ontology
Reactome pathways
2 pathways
| ID | Pathway |
|---|---|
| R-HSA-446193 | Biosynthesis of the N-glycan precursor (dolichol lipid-linked oligosaccharide, LLO) and transfer to a nascent protein |
| R-HSA-4549356 | Defective DPAGT1 causes CDG-1j, CMSTA2 |
MSigDB gene sets: 581 (showing top):
GOBP_PROTEIN_N_LINKED_GLYCOSYLATION, GOBP_ALPHA_AMINO_ACID_METABOLIC_PROCESS, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN, GRAESSMANN_RESPONSE_TO_MC_AND_DOXORUBICIN_DN, KEGG_N_GLYCAN_BIOSYNTHESIS, MODULE_503, GOBP_CARBOHYDRATE_DERIVATIVE_METABOLIC_PROCESS, RUTELLA_RESPONSE_TO_CSF2RB_AND_IL4_UP, HOSHIDA_LIVER_CANCER_SUBCLASS_S3, GOBP_CARBOHYDRATE_DERIVATIVE_BIOSYNTHETIC_PROCESS, GOBP_ORGANIC_ACID_CATABOLIC_PROCESS, HSIAO_LIVER_SPECIFIC_GENES, MOOTHA_GLUCONEOGENESIS, GOBP_ORGANIC_ACID_METABOLIC_PROCESS, GOBP_SMALL_MOLECULE_CATABOLIC_PROCESS
GO Biological Process (3): protein N-linked glycosylation (GO:0006487), dolichol-linked oligosaccharide biosynthetic process (GO:0006488), obsolete protein glycosylation (GO:0006486)
GO Molecular Function (8): UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity (GO:0003975), UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity (GO:0003976), glycosyltransferase activity (GO:0016757), identical protein binding (GO:0042802), metal ion binding (GO:0046872), protein binding (GO:0005515), transferase activity (GO:0016740), phosphotransferase activity, for other substituted phosphate groups (GO:0016780)
GO Cellular Component (6): endoplasmic reticulum membrane (GO:0005789), Golgi apparatus (GO:0005794), membrane (GO:0016020), intracellular membrane-bounded organelle (GO:0043231), endoplasmic reticulum (GO:0005783), endomembrane system (GO:0012505)
Reactome top-level categories
Rollup of top-2 pathways:
| Category | Pathways |
|---|---|
| Asparagine N-linked glycosylation | 1 |
| Diseases associated with N-glycosylation of proteins | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| phosphotransferase activity, for other substituted phosphate groups | 2 |
| cytoplasm | 2 |
| endomembrane system | 2 |
| intracellular membrane-bounded organelle | 2 |
| cellular anatomical structure | 2 |
| glycoprotein biosynthetic process | 1 |
| protein N-linked glycosylation | 1 |
| carbohydrate derivative biosynthetic process | 1 |
| transferase activity | 1 |
| protein binding | 1 |
| cation binding | 1 |
| binding | 1 |
| catalytic activity | 1 |
| transferase activity, transferring phosphorus-containing groups | 1 |
| organelle membrane | 1 |
| nuclear outer membrane-endoplasmic reticulum membrane network | 1 |
| endoplasmic reticulum subcompartment | 1 |
| intracellular anatomical structure | 1 |
| membrane-bounded organelle | 1 |
| intracellular organelle | 1 |
| vacuole | 1 |
| plasma membrane | 1 |
Protein interactions and networks
STRING
1892 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| DPAGT1 | ALG13 | Q9NP73 | 995 |
| DPAGT1 | ALG14 | Q96F25 | 994 |
| DPAGT1 | PMM2 | O15305 | 891 |
| DPAGT1 | ALG1 | Q9BT22 | 799 |
| DPAGT1 | ALG6 | Q9Y672 | 793 |
| DPAGT1 | GFPT1 | Q06210 | 773 |
| DPAGT1 | ALG11 | Q2TAA5 | 760 |
| DPAGT1 | ALG8 | Q9BVK2 | 759 |
| DPAGT1 | ALG12 | Q9BV10 | 744 |
| DPAGT1 | ALG3 | Q92685 | 743 |
| DPAGT1 | DPM1 | O60762 | 729 |
| DPAGT1 | ALG5 | Q9Y673 | 719 |
| DPAGT1 | GMPPB | Q9Y5P6 | 714 |
| DPAGT1 | REPS1 | Q96D71 | 692 |
| DPAGT1 | DOLK | Q9UPQ8 | 689 |
IntAct
13 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| HTT | DPAGT1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| DPAGT1 | DPAGT1 | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| MFSD3 | DPAGT1 | psi-mi:“MI:0915”(physical association) | 0.370 |
| CUL3 | PXDNL | psi-mi:“MI:0914”(association) | 0.350 |
| NS3 | C15orf61 | psi-mi:“MI:0914”(association) | 0.350 |
| NBAS | psi-mi:“MI:0914”(association) | 0.350 | |
| CD1E | ADAM10 | psi-mi:“MI:0914”(association) | 0.350 |
| DPAGT1 | ALOX12B | psi-mi:“MI:0914”(association) | 0.350 |
| ARMCX4 | PRKACB | psi-mi:“MI:0914”(association) | 0.350 |
| SMPD2 | A2ML1 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (23): DPAGT1 (Affinity Capture-MS), DPAGT1 (Affinity Capture-MS), ST3GAL2 (Affinity Capture-MS), STX4 (Affinity Capture-MS), RAB21 (Affinity Capture-MS), SCCPDH (Affinity Capture-MS), ALOX12B (Affinity Capture-MS), DPAGT1 (Synthetic Lethality), DPAGT1 (Affinity Capture-RNA), ST3GAL2 (Affinity Capture-MS), DPAGT1 (Affinity Capture-MS), ADPGK (Affinity Capture-MS), OLFML3 (Affinity Capture-MS), ALOX12B (Affinity Capture-MS), DPAGT1 (Affinity Capture-MS)
ESM2 similar proteins: A0JNC1, B0BMY1, B7FA90, D2HKB0, D3ZG27, E7FB98, O35052, P23338, P24140, P42867, P49281, P49282, P98191, Q12887, Q17QZ3, Q1LZA0, Q1LZE6, Q28H54, Q28HR4, Q38833, Q5EA65, Q5F3N0, Q5R460, Q5RA57, Q5W6H5, Q5ZHQ5, Q5ZKD1, Q5ZKS8, Q6AXM5, Q6ZP29, Q7ZYQ3, Q8BGS7, Q8C4N4, Q8CFY5, Q8NA29, Q8R070, Q92521, Q92903, Q99P55, Q9BX95
Diamond homologs: P07286, P0CD61, P23338, P24140, P42864, P42867, P42881, Q5EA65, Q5L520, Q821S0, Q9H3H5, A1AVY0, A4XI01, A6LTS6, B5YFT8, B8FT59, B8IZT8, Q24TE3, Q2RK82, Q6AJ51, Q8ER51, A5VJ31, B2G6K3, Q8R9G3, B1I4C7, O34753, A5D148
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
344 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 13 |
| Likely pathogenic | 20 |
| Uncertain significance | 149 |
| Likely benign | 112 |
| Benign | 10 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1451203 | NM_001382.4(DPAGT1):c.762_765del (p.Cys255fs) | Pathogenic |
| 2927002 | NM_001382.4(DPAGT1):c.732C>A (p.Tyr244Ter) | Pathogenic |
| 3233256 | NM_001382.4(DPAGT1):c.1133A>T (p.Asn378Ile) | Pathogenic |
| 36920 | NM_001382.4(DPAGT1):c.699dup (p.Thr234fs) | Pathogenic |
| 36921 | NM_001382.4(DPAGT1):c.358C>A (p.Leu120Met) | Pathogenic |
| 36922 | NM_001382.4(DPAGT1):c.791T>G (p.Val264Gly) | Pathogenic |
| 3752613 | NM_001382.4(DPAGT1):c.980_981del (p.Ser327fs) | Pathogenic |
| 39774 | NM_001382.4(DPAGT1):c.161+5G>A | Pathogenic |
| 4785074 | NM_001382.4(DPAGT1):c.172C>T (p.Gln58Ter) | Pathogenic |
| 4786678 | NM_001382.4(DPAGT1):c.737C>A (p.Ser246Ter) | Pathogenic |
| 565496 | NM_001382.4(DPAGT1):c.360G>C (p.Leu120=) | Pathogenic |
| 640003 | NM_001382.4(DPAGT1):c.398C>G (p.Ser133Ter) | Pathogenic |
| 65471 | NM_001382.4(DPAGT1):c.503T>C (p.Leu168Pro) | Pathogenic |
| 1299537 | NM_001382.4(DPAGT1):c.1097T>C (p.Leu366Ser) | Likely pathogenic |
| 1333389 | NM_001382.4(DPAGT1):c.457A>T (p.Lys153Ter) | Likely pathogenic |
| 1480366 | NM_001382.4(DPAGT1):c.644-1G>T | Likely pathogenic |
| 1685304 | NM_001382.4(DPAGT1):c.643+1G>A | Likely pathogenic |
| 2445686 | NC_000011.9:g.(118971849_118972204)(118972786?)del | Likely pathogenic |
| 2499560 | NM_001382.4(DPAGT1):c.742G>A (p.Val248Met) | Likely pathogenic |
| 2954181 | NM_001382.4(DPAGT1):c.1005+1G>A | Likely pathogenic |
| 3382969 | NM_001382.4(DPAGT1):c.728+1del | Likely pathogenic |
| 36918 | NM_001382.4(DPAGT1):c.349G>A (p.Val117Ile) | Likely pathogenic |
| 429774 | NM_001382.4(DPAGT1):c.1123C>T (p.His375Tyr) | Likely pathogenic |
| 4786262 | NM_001382.4(DPAGT1):c.282+1G>A | Likely pathogenic |
| 4845787 | NM_001382.4(DPAGT1):c.698dup (p.Thr234fs) | Likely pathogenic |
| 65469 | NM_001382.4(DPAGT1):c.341C>G (p.Ala114Gly) | Likely pathogenic |
| 802807 | NM_001382.4(DPAGT1):c.574G>C (p.Gly192Arg) | Likely pathogenic |
| 807593 | NM_001382.4(DPAGT1):c.698T>C (p.Phe233Ser) | Likely pathogenic |
| 996651 | NM_001382.4(DPAGT1):c.1197T>A (p.Tyr399Ter) | Likely pathogenic |
| 996692 | NM_001382.4(DPAGT1):c.419A>G (p.Tyr140Cys) | Likely pathogenic |
SpliceAI
3383 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 11:119097294:CCAC:C | acceptor_gain | 1.0000 |
| 11:119097295:CACC:C | acceptor_gain | 1.0000 |
| 11:119097297:CCTGG:C | acceptor_loss | 1.0000 |
| 11:119097298:C:CC | acceptor_gain | 1.0000 |
| 11:119097299:T:A | acceptor_loss | 1.0000 |
| 11:119097309:A:T | acceptor_gain | 1.0000 |
| 11:119098399:TTA:T | donor_loss | 1.0000 |
| 11:119098400:TA:T | donor_loss | 1.0000 |
| 11:119098401:A:AC | donor_gain | 1.0000 |
| 11:119098401:A:C | donor_loss | 1.0000 |
| 11:119098402:C:CC | donor_gain | 1.0000 |
| 11:119098486:ACCTT:A | acceptor_loss | 1.0000 |
| 11:119098487:CCTT:C | acceptor_gain | 1.0000 |
| 11:119098489:T:A | acceptor_loss | 1.0000 |
| 11:119098490:T:C | acceptor_gain | 1.0000 |
| 11:119098490:T:TC | acceptor_gain | 1.0000 |
| 11:119098497:C:CT | acceptor_gain | 1.0000 |
| 11:119098498:A:T | acceptor_gain | 1.0000 |
| 11:119100257:CCTA:C | donor_loss | 1.0000 |
| 11:119100259:TACCT:T | donor_loss | 1.0000 |
| 11:119100260:ACCT:A | donor_loss | 1.0000 |
| 11:119108091:ACGGG:A | donor_gain | 1.0000 |
| 11:119108092:CGGG:C | donor_gain | 1.0000 |
| 11:119108093:GGG:G | donor_gain | 1.0000 |
| 11:119108093:GGGG:G | donor_gain | 1.0000 |
| 11:119108094:GG:G | donor_gain | 1.0000 |
| 11:119108094:GGG:G | donor_gain | 1.0000 |
| 11:119108095:GG:G | donor_gain | 1.0000 |
| 11:119108096:G:GA | donor_loss | 1.0000 |
| 11:119108096:G:GG | donor_gain | 1.0000 |
AlphaMissense
2669 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 11:119100350:A:C | N185K | 1.000 |
| 11:119100350:A:T | N185K | 1.000 |
| 11:119097917:G:C | N285K | 0.999 |
| 11:119097917:G:T | N285K | 0.999 |
| 11:119098020:C:A | G251V | 0.999 |
| 11:119100731:G:T | A132D | 0.999 |
| 11:119100751:C:A | K125N | 0.999 |
| 11:119100751:C:G | K125N | 0.999 |
| 11:119100760:C:A | W122C | 0.999 |
| 11:119100760:C:G | W122C | 0.999 |
| 11:119100762:A:G | W122R | 0.999 |
| 11:119100762:A:T | W122R | 0.999 |
| 11:119100779:T:A | D116V | 0.999 |
| 11:119100779:T:C | D116G | 0.999 |
| 11:119100779:T:G | D116A | 0.999 |
| 11:119100780:C:G | D116H | 0.999 |
| 11:119100781:A:C | D115E | 0.999 |
| 11:119100781:A:T | D115E | 0.999 |
| 11:119100782:T:A | D115V | 0.999 |
| 11:119100782:T:G | D115A | 0.999 |
| 11:119100783:C:G | D115H | 0.999 |
| 11:119100791:C:T | G112D | 0.999 |
| 11:119100792:C:G | G112R | 0.999 |
| 11:119097976:C:G | G266R | 0.998 |
| 11:119097984:G:T | A263D | 0.998 |
| 11:119097996:C:T | G259D | 0.998 |
| 11:119097997:C:G | G259R | 0.998 |
| 11:119098007:A:C | C255W | 0.998 |
| 11:119098017:T:A | D252V | 0.998 |
| 11:119098017:T:C | D252G | 0.998 |
dbSNP variants (sampled 300 via entrez): RS1000213032 (11:119102476 T>C,G), RS1000265564 (11:119102674 T>C), RS1000700484 (11:119095205 G>A,T), RS1000809642 (11:119095563 T>C), RS1001422022 (11:119100150 C>T), RS1001541110 (11:119095607 C>T), RS1001596868 (11:119095883 C>T), RS1001996468 (11:119094079 CG>C), RS1002225361 (11:119103052 C>T), RS1002443737 (11:119098882 T>C), RS1003061278 (11:119101911 A>G), RS1003269168 (11:119097530 T>G), RS1004257036 (11:119102697 G>A), RS1004776855 (11:119102113 A>C), RS1004877876 (11:119095460 A>C,G)
Disease associations
OMIM: gene MIM:191350 | disease phenotypes: MIM:608093, MIM:614750, MIM:160565, MIM:232220, MIM:232240
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| DPAGT1-congenital disorder of glycosylation | Definitive | Autosomal recessive |
| congenital myasthenic syndrome 13 | Definitive | Autosomal recessive |
| congenital myasthenic syndromes with glycosylation defect | Supportive | Autosomal recessive |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| DPAGT1-congenital disorder of glycosylation | Definitive | AR |
Mondo (7): DPAGT1-congenital disorder of glycosylation (MONDO:0011964), congenital myasthenic syndrome 13 (MONDO:0013883), congenital disorder of glycosylation (MONDO:0015286), tubular aggregate myopathy (MONDO:0008051), neurodevelopmental disorder (MONDO:0700092), glycogen storage disease Ib (MONDO:0009288), (MONDO:0018144)
Orphanet (7): Congenital myasthenic syndrome with glycosylation defect (Orphanet:353327), Congenital myasthenic syndrome (Orphanet:590), DPAGT1-CDG (Orphanet:86309), Congenital disorder of glycosylation (Orphanet:137), Tubular aggregate myopathy (Orphanet:2593), Glycogen storage disease due to glucose-6-phosphatase deficiency (Orphanet:364), Glycogen storage disease due to glucose-6-phosphatase deficiency type Ib (Orphanet:79259)
HPO phenotypes
123 total (30 of 123 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000028 | Cryptorchidism |
| HP:0000218 | High palate |
| HP:0000252 | Microcephaly |
| HP:0000347 | Micrognathia |
| HP:0000365 | Hearing impairment |
| HP:0000483 | Astigmatism |
| HP:0000486 | Strabismus |
| HP:0000508 | Ptosis |
| HP:0000510 | Rod-cone dystrophy |
| HP:0000518 | Cataract |
| HP:0000519 | Developmental cataract |
| HP:0000577 | Exotropia |
| HP:0000639 | Nystagmus |
| HP:0000648 | Optic atrophy |
| HP:0000662 | Nyctalopia |
| HP:0000717 | Autism |
| HP:0000718 | Aggressive behavior |
| HP:0000750 | Delayed speech and language development |
| HP:0000939 | Osteoporosis |
| HP:0000952 | Jaundice |
| HP:0000954 | Single transverse palmar crease |
| HP:0000998 | Hypertrichosis |
| HP:0001072 | Thickened skin |
| HP:0001166 | Arachnodactyly |
| HP:0001249 | Intellectual disability |
| HP:0001250 | Seizure |
| HP:0001251 | Ataxia |
| HP:0001252 | Hypotonia |
| HP:0001263 | Global developmental delay |
GWAS associations
4 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST008059_151 | Estimated glomerular filtration rate | 1.000000e-11 |
| GCST90002389_371 | Lymphocyte percentage of white cells | 1.000000e-14 |
| GCST90002396_509 | Mean reticulocyte volume | 2.000000e-80 |
| GCST90002397_405 | Mean spheric corpuscular volume | 2.000000e-15 |
EFO canonical traits (2, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0007993 | lymphocyte percentage of leukocytes |
| EFO:0010701 | mean reticulocyte volume |
MeSH disease descriptors (4)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D018981 | Congenital Disorders of Glycosylation | C16.320.565.202.125; C18.452.648.202.125 |
| D065886 | Neurodevelopmental Disorders | F03.625 |
| C535748 | Congenital disorder of glycosylation type 1J (supp.) | |
| C562594 | Glycogen Storage Disease IB (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL4739704 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
ChEMBL bioactivities
4 potent at pChembl≥5 of 6 total, top 4 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 8.00 | IC50 | 10 | nM | CHEMBL4776441 |
| 6.70 | IC50 | 200 | nM | CHEMBL4753142 |
| 6.22 | IC50 | 600 | nM | CHEMBL4752744 |
| 5.35 | IC50 | 4500 | nM | CHEMBL4797442 |
PubChem BioAssay actives
4 with measured affinity, of 17 total; 4 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 4-[[(2S,3S)-1-amino-3-[(2S,3R,4S,5R)-5-(aminomethyl)-3,4-dihydroxyoxolan-2-yl]oxy-3-[(2S,3S,4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-3,4-dihydroxyoxolan-2-yl]-1-oxopropan-2-yl]amino]-N-[[4-[4-[4-(trifluoromethoxy)phenoxy]piperidin-1-yl]phenyl]methyl]butanamide | 1696848: Inhibition of human DPAGT1 expressed in HEK293 (Expi293) cells incubated for 2 hrs using UDP-GlcN-Cg-FITC and alpha-dihydroundecap-renyl phosphate by reversed-phase HPLC analysis | ic50 | 0.0100 | uM |
| (2S,3S,4S)-2-[(1R)-2-amino-1-[(2S,3S,4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-4-hydroxy-3-methoxyoxolan-2-yl]-2-oxoethoxy]-3,4-dihydroxy-N-[[4-[4-[4-(trifluoromethoxy)phenoxy]piperidin-1-yl]phenyl]methyl]-3,4-dihydro-2H-pyran-6-carboxamide | 1696848: Inhibition of human DPAGT1 expressed in HEK293 (Expi293) cells incubated for 2 hrs using UDP-GlcN-Cg-FITC and alpha-dihydroundecap-renyl phosphate by reversed-phase HPLC analysis | ic50 | 0.2000 | uM |
| (2S,3S,4S)-2-[(1R)-2-amino-1-[(2S,3R,4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-3-hydroxy-4-methoxyoxolan-2-yl]-2-oxoethoxy]-3,4-dihydroxy-N-[[4-[4-[4-(trifluoromethoxy)phenoxy]piperidin-1-yl]phenyl]methyl]-3,4-dihydro-2H-pyran-6-carboxamide | 1696848: Inhibition of human DPAGT1 expressed in HEK293 (Expi293) cells incubated for 2 hrs using UDP-GlcN-Cg-FITC and alpha-dihydroundecap-renyl phosphate by reversed-phase HPLC analysis | ic50 | 0.6000 | uM |
| (2S,3S,4S)-2-[(1R)-2-amino-1-[(2S,3R,4R,5R)-5-(2,4-dioxopyrimidin-1-yl)-3,4-dimethoxyoxolan-2-yl]-2-oxoethoxy]-3,4-dihydroxy-N-[(3S)-2-oxoazepan-3-yl]-3,4-dihydro-2H-pyran-6-carboxamide | 1696848: Inhibition of human DPAGT1 expressed in HEK293 (Expi293) cells incubated for 2 hrs using UDP-GlcN-Cg-FITC and alpha-dihydroundecap-renyl phosphate by reversed-phase HPLC analysis | ic50 | 4.5000 | uM |
CTD chemical–gene interactions
39 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| sodium arsenite | affects methylation, decreases expression, affects cotreatment, increases abundance, increases expression | 4 |
| Valproic Acid | affects expression, decreases methylation, increases expression | 4 |
| bisphenol A | decreases expression, affects cotreatment | 2 |
| cobaltous chloride | decreases expression | 2 |
| Cisplatin | affects expression, increases expression | 2 |
| Tunicamycin | increases expression | 2 |
| dicrotophos | increases expression | 1 |
| beta-lapachone | decreases expression | 1 |
| ochratoxin A | decreases expression | 1 |
| beta-methylcholine | affects expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| perfluorooctane sulfonic acid | increases expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| perfluoro-n-nonanoic acid | affects methylation | 1 |
| ICG 001 | increases expression | 1 |
| bisphenol B | increases expression | 1 |
| abrine | decreases expression | 1 |
| bisphenol S | affects cotreatment, decreases expression | 1 |
| Temozolomide | increases expression | 1 |
| Decitabine | affects expression | 1 |
| Arsenic Trioxide | increases expression | 1 |
| Ethanol | decreases expression, increases abundance, affects cotreatment | 1 |
| Arsenic | affects cotreatment, increases abundance, increases expression | 1 |
| Benzo(a)pyrene | increases methylation | 1 |
| Coumestrol | increases expression | 1 |
| Dexamethasone | affects cotreatment, decreases expression | 1 |
| Diuron | decreases expression | 1 |
| Doxorubicin | decreases expression | 1 |
| Ethyl Methanesulfonate | decreases expression | 1 |
| Fluorouracil | affects response to substance | 1 |
ChEMBL screening assays
7 unique, capped per target: 7 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL4701670 | Binding | Inhibition of human DPAGT1 expressed in HEK293 (Expi293) cells incubated for 2 hrs using UDP-GlcN-Cg-FITC and alpha-dihydroundecap-renyl phosphate by reversed-phase HPLC analysis | DPAGT1 Inhibitors of Capuramycin Analogues and Their Antimigratory Activities of Solid Tumors. — J Med Chem |
Cellosaurus cell lines
1 cell lines: 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_DB02 | GM20941 | Transformed cell line | Female |
Clinical trials (associated diseases)
217 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT04586348 | PHASE4 | UNKNOWN | Prenatal Iodine Supplementation and Early Childhood Neurodevelopment |
| NCT04873115 | PHASE4 | UNKNOWN | Double-blind, Placebo-controlled, Randomized Clinical Trial Comparing the Efficacy and Safety of Sialanar Plus orAl rehabiLitation Against Placebo Plus Oral Rehabilitation for chIldren and Adolescents With seVere Sialorrhoea and Neurodisabilties, |
| NCT02559102 | PHASE3 | COMPLETED | Dexmedetomidine Sedation Versus General Anaesthesia for Inguinal Hernia Surgery in Infants |
| NCT02757079 | PHASE3 | COMPLETED | Study of the Efficacy and Safety of NPC-15 for Sleep Disorders of Children With Neurodevelopmental Disorders |
| NCT06915480 | PHASE3 | RECRUITING | Reducing Missed Appointments |
| NCT07377032 | PHASE3 | RECRUITING | TAP-GRIN: Interventional Study on Patients With GRIN-related Neurodevelopmental Disorders |
| NCT02909959 | PHASE2 | COMPLETED | Sulforaphane for the Treatment of Young Men With Autism Spectrum Disorder |
| NCT06081348 | PHASE2 | RECRUITING | Sertraline vs. Placebo in the Treatment of Anxiety in Children and AdoLescents With NeurodevelopMental Disorders |
| NCT06352372 | PHASE2 | COMPLETED | Safety and Efficacy of tPBM for Epileptiform Activity in Autism |
| NCT05960617 | PHASE2 | UNKNOWN | Efficacy and Safety of Empagliflozin in GSD-Ib Patients |
| NCT07572825 | PHASE1 | NOT_YET_RECRUITING | Assessing the Safety and Tolerability of NMN in DHDDS-CDG |
| NCT00503191 | PHASE1 | COMPLETED | NeuroModulation Technique Treatment of Autism |
| NCT04475848 | PHASE1 | COMPLETED | A Study to Investigate the Safety, Tolerability, Pharmacokinetics, Pharmacodynamics and Food Effect of RO6953958 in Healthy Participants |
| NCT06300398 | PHASE1 | COMPLETED | IAMA-6 Oral Dose Study in Healthy Adults |
| NCT02089789 | Not specified | RECRUITING | Clinical and Basic Investigations Into Known and Suspected Congenital Disorders of Glycosylation |
| NCT02503267 | Not specified | UNKNOWN | Incidence and Consequences of Disorders of Glycosylation in Patients With Conotruncal and Septal Heart Defects |
| NCT02955264 | Not specified | COMPLETED | Using D-Galactose as a Food Supplement in Congenital Disorders of Glycosylation |
| NCT03250728 | Not specified | COMPLETED | Role of the Endothelium in Stroke-like Episode Among CDG Patients |
| NCT03560570 | Not specified | COMPLETED | Study of Hemostasis in Patients With Congenital Disorder of Glycosylation |
| NCT04198987 | Not specified | COMPLETED | Dietary Monosaccharide Supplementation in Patients With Congenital Disorders of Glycosylation |
| NCT04199000 | Not specified | RECRUITING | Clinical and Basic Investigations Into Congenital Disorders of Glycosylation |
| NCT04201067 | Not specified | COMPLETED | Large-Scale Metabolomic Profiling for the Diagnosis of Inborn Errors of Metabolism |
| NCT01783041 | PHASE2/PHASE3 | COMPLETED | Effect of Early L-Carnitine Supplementation on Neurodevelopmental Outcomes in Very Preterm Infants |
| NCT05767385 | PHASE2/PHASE3 | RECRUITING | Fetal Cerebrovascular Autoregulation in Congenital Heart Disease and Association With Neonatal Neurobehavior |
| NCT05675098 | EARLY_PHASE1 | NOT_YET_RECRUITING | Central Nervous System Stimulants and Physical Function in Children With Cerebral Palsy |
| NCT00783783 | Not specified | COMPLETED | CYP2D6 Pharmacogenetics in Risperidone-Treated Children |
| NCT01778504 | Not specified | RECRUITING | Studying Childhood-onset Behavioral, Psychiatric, and Developmental Disorders |
| NCT01850784 | Not specified | UNKNOWN | High Energy Formula Feeding in Infants With Congenital Heart Disease |
| NCT01922791 | Not specified | COMPLETED | Nutrition and Pregnancy Intervention Study |
| NCT01942525 | Not specified | UNKNOWN | Influence of Intrauterine Growth Restriction on Amplitude-integrated EEG in Preterm Infants |
| NCT02003170 | Not specified | COMPLETED | Etiology and Early Diagnosis of Neurodevelopmental Disorders |
| NCT02118649 | Not specified | ACTIVE_NOT_RECRUITING | Enhancing Behavior and Brain Response to Visual Targets Using a Computer Game |
| NCT02557191 | Not specified | TERMINATED | Biomarkers, Neurodevelopment and Preterm Infants |
| NCT02690675 | Not specified | COMPLETED | Iron Supplement Effect on Child Development |
| NCT02694003 | Not specified | COMPLETED | Better Nights, Better Days for Children With Neurodevelopment Disorders |
| NCT02792894 | Not specified | COMPLETED | Family Networks (FaNs) for Children With Developmental Disorders and Delays |
| NCT02871674 | Not specified | UNKNOWN | Good Night Project: Behavioural Sleep Interventions for Children With ADHD: A Randomised Controlled Trial |
| NCT02887157 | Not specified | COMPLETED | Analyzing Retinal Microanatomy in ROP |
| NCT02898298 | Not specified | COMPLETED | Positive Emotion Regulation Training in Children, Adolescents and Young Adults With and Without Developmental Disorder |
| NCT02912780 | Not specified | UNKNOWN | Introduction of Microsystems in a Level 3 Neonatal Intensive Care Unit |
Related Atlas pages
- Associated diseases: DPAGT1-congenital disorder of glycosylation, congenital myasthenic syndrome 13
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): congenital disorder of glycosylation, congenital myasthenic syndrome 13, DPAGT1-congenital disorder of glycosylation, glycogen storage disease Ib, tubular aggregate myopathy