DRC2
gene geneOn this page
Also known as NYD-SP28FLJ35732FAP250CFAP250CILD27
Summary
DRC2 (dynein regulatory complex subunit 2, HGNC:29937) is a protein-coding gene on chromosome 12q13.12, encoding Dynein regulatory complex subunit 2 (Q8IXS2). Component of the nexin-dynein regulatory complex (N-DRC), a key regulator of ciliary/flagellar motility which maintains the alignment and integrity of the distal axoneme and regulates microtubule sliding in motile axonemes.
This gene encodes a sperm tail protein that is highly expressed in adult testis, spermatocytes and spermatids. The protein plays a critical role in the assembly of the nexin-dynein regulatory complex. Mutations in this gene result in primary ciliary dyskinesia.
Source: NCBI Gene 85478 — RefSeq curated summary.
At a glance
- Gene–disease (curated): primary ciliary dyskinesia 27 (Definitive, ClinGen) — +1 more curated relationship
- GWAS associations: 1
- Clinical variants (ClinVar): 281 total — 15 pathogenic, 4 likely-pathogenic
- Phenotypes (HPO): 56
- MANE Select transcript:
NM_033124
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:29937 |
| Approved symbol | DRC2 |
| Name | dynein regulatory complex subunit 2 |
| Location | 12q13.12 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | NYD-SP28, FLJ35732, FAP250, CFAP250, CILD27, DRC2 |
| Ensembl gene | ENSG00000139537 |
| Ensembl biotype | protein_coding |
| OMIM | 611088 |
| Entrez | 85478 |
Gene structure
Transcript identifiers
Ensembl transcripts: 6 — 4 protein_coding, 1 nonsense_mediated_decay, 1 retained_intron
ENST00000266984, ENST00000320516, ENST00000547861, ENST00000552188, ENST00000552942, ENST00000943642
RefSeq mRNA: 2 — MANE Select: NM_033124
NM_001286957, NM_033124
CCDS: CCDS8772
Canonical transcript exons
ENST00000320516 — 8 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001221846 | 48921168 | 48921576 |
| ENSE00001664049 | 48904946 | 48905113 |
| ENSE00002428559 | 48904133 | 48904468 |
| ENSE00003497888 | 48918275 | 48918472 |
| ENSE00003593758 | 48918685 | 48918903 |
| ENSE00003604654 | 48914404 | 48914573 |
| ENSE00003680376 | 48916970 | 48917108 |
| ENSE00003687088 | 48920930 | 48921082 |
Expression profiles
Bgee: expression breadth ubiquitous, 179 present calls, max score 95.28.
FANTOM5 (CAGE): breadth broad, TPM avg 1.5757 / max 129.4614, expressed in 303 samples.
FANTOM5 promoters (4 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 125280 | 0.7235 | 205 |
| 125282 | 0.6623 | 74 |
| 125281 | 0.1190 | 45 |
| 125279 | 0.0709 | 21 |
Top tissues by expression
239 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right uterine tube | UBERON:0001302 | 95.28 | gold quality |
| bronchial epithelial cell | CL:0002328 | 93.36 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 92.67 | gold quality |
| bronchus | UBERON:0002185 | 92.15 | gold quality |
| left testis | UBERON:0004533 | 90.12 | gold quality |
| right testis | UBERON:0004534 | 89.83 | gold quality |
| granulocyte | CL:0000094 | 89.12 | gold quality |
| testis | UBERON:0000473 | 87.79 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 87.65 | gold quality |
| oviduct epithelium | UBERON:0004804 | 86.07 | gold quality |
| mucosa of paranasal sinus | UBERON:0005030 | 84.19 | gold quality |
| right frontal lobe | UBERON:0002810 | 84.00 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 83.85 | gold quality |
| fallopian tube | UBERON:0003889 | 82.77 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 82.23 | gold quality |
| epithelium of nasopharynx | UBERON:0001951 | 82.10 | gold quality |
| nasopharynx | UBERON:0001728 | 82.09 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 81.35 | gold quality |
| nucleus accumbens | UBERON:0001882 | 80.49 | gold quality |
| cortical plate | UBERON:0005343 | 79.96 | gold quality |
| caudate nucleus | UBERON:0001873 | 79.37 | gold quality |
| amygdala | UBERON:0001876 | 79.31 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 78.16 | gold quality |
| hypothalamus | UBERON:0001898 | 77.99 | gold quality |
| adenohypophysis | UBERON:0002196 | 77.54 | gold quality |
| prefrontal cortex | UBERON:0000451 | 77.15 | gold quality |
| putamen | UBERON:0001874 | 76.47 | gold quality |
| nasal cavity mucosa | UBERON:0001826 | 75.95 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 75.76 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 75.51 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 8.47 |
| E-MTAB-9388 | yes | 6.71 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
12 targeting DRC2, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-513A-5P | 100.00 | 69.77 | 2465 |
| HSA-MIR-371B-5P | 99.99 | 75.34 | 4759 |
| HSA-MIR-373-5P | 99.98 | 75.36 | 4753 |
| HSA-MIR-616-5P | 99.98 | 75.58 | 4775 |
| HSA-MIR-6829-5P | 98.86 | 65.12 | 1480 |
| HSA-MIR-3190-3P | 97.61 | 66.95 | 1406 |
| HSA-MIR-216B-5P | 97.16 | 66.76 | 1126 |
| HSA-MIR-517-5P | 97.13 | 68.43 | 781 |
| HSA-MIR-5694 | 97.06 | 67.70 | 682 |
| HSA-MIR-3059-3P | 96.71 | 67.08 | 606 |
| HSA-MIR-1251-5P | 95.78 | 64.10 | 374 |
Literature-anchored findings (GeneRIF, showing 4)
- NYD-SP28, a sperm tail protein, was cloned and characterized. (PMID:17089017)
- Mutation in CCDC65, a nexin-dynein regulatory complex member, resulted in a frameshift mutation and PCD (PMID:23991085)
- CCDC65 as a new potential tumor suppressor induced by metformin inhibits activation of AKT1 via ubiquitination of ENO1 in gastric cancer. (PMID:34335983)
- CCDC65, encoding a component of the axonemal Nexin-Dynein regulatory complex, is required for sperm flagellum structure in humans. (PMID:37975235)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | ccdc65 | ENSDARG00000032005 |
| mus_musculus | Ccdc65 | ENSMUSG00000003354 |
| rattus_norvegicus | Ccdc65 | ENSRNOG00000058916 |
| drosophila_melanogaster | CG30259 | FBGN0050259 |
Paralogs (1): DRC1 (ENSG00000157856)
Protein
Protein identifiers
Dynein regulatory complex subunit 2 — Q8IXS2 (reviewed: Q8IXS2)
Alternative names: Coiled-coil domain-containing protein 65, Testis development protein NYD-SP28
All UniProt accessions (3): Q8IXS2, F8VR42, F8W0R6
UniProt curated annotations — full annotation on UniProt →
Function. Component of the nexin-dynein regulatory complex (N-DRC), a key regulator of ciliary/flagellar motility which maintains the alignment and integrity of the distal axoneme and regulates microtubule sliding in motile axonemes. Plays a critical role in the assembly of N-DRC and also stabilizes the assembly of multiple inner dynein arms and radial spokes. Coassembles with DRC1 to form a central scaffold needed for assembly of the N-DRC and its attachment to the outer doublet microtubules.
Subunit / interactions. Component of the nexin-dynein regulatory complex (N-DRC). Interacts with DRC1.
Subcellular location. Cytoplasm. Cytoskeleton. Flagellum basal body. Cell projection. Cilium. Flagellum. Flagellum axoneme.
Tissue specificity. Highly expressed in adult testis, in spermatocytes and spermatids. Also observed in spermatogonia. Not detected in Leydig cells, nor in fetal testis (at protein level).
Disease relevance. Ciliary dyskinesia, primary, 27 (CILD27) [MIM:615504] A disorder characterized by abnormalities of motile cilia. Respiratory infections leading to chronic inflammation and bronchiectasis are recurrent, due to defects in the respiratory cilia. Patients may exhibit randomization of left-right body asymmetry and situs inversus, due to dysfunction of monocilia at the embryonic node. Primary ciliary dyskinesia associated with situs inversus is referred to as Kartagener syndrome. The disease is caused by variants affecting the gene represented in this entry. Cilia ultrastructure show normal outer dynein arms, radial spokes and central pairs, but a reduction in inner dynein arms and nexin links. In 5%-15% of cilia, microtubules are disorganized. Nasal epithelial cilia reveal a stiff, dyskinetic cilia waveform.
Similarity. Belongs to the DRC2 family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q8IXS2-1 | 1 | yes |
| Q8IXS2-2 | 2 |
RefSeq proteins (2): NP_001273886, NP_149115* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR039505 | DRC1/2_N | Domain |
| IPR039750 | DRC1/DRC2 | Family |
Pfam: PF14772
UniProt features (10 total): sequence conflict 4, coiled-coil region 2, sequence variant 2, chain 1, splice variant 1
Structure
Experimental structures (PDB)
1 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 8J07 | ELECTRON MICROSCOPY | 4.1 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q8IXS2-F1 | 83.21 | 0.57 |
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 222 (showing top):
GOBP_REGULATION_OF_MICROTUBULE_BASED_PROCESS, GOBP_MACROMOLECULE_CATABOLIC_PROCESS, CAGCTG_AP4_Q5, GOCC_MICROTUBULE_ORGANIZING_CENTER, COUP_01, GOBP_AXONEMAL_DYNEIN_COMPLEX_ASSEMBLY, SENGUPTA_NASOPHARYNGEAL_CARCINOMA_DN, GOBP_CILIUM_ORGANIZATION, GOBP_PHOSPHATIDYLINOSITOL_3_KINASE_PROTEIN_KINASE_B_SIGNAL_TRANSDUCTION, CCTGTGA_MIR513, GOBP_CILIUM_MOVEMENT, GOBP_REGULATION_OF_MICROTUBULE_BASED_MOVEMENT, GOBP_CILIUM_OR_FLAGELLUM_DEPENDENT_CELL_MOTILITY, GOBP_ORGANELLE_ASSEMBLY, CYTAGCAAY_UNKNOWN
GO Biological Process (4): regulation of cilium movement (GO:0003352), cilium assembly (GO:0060271), cilium-dependent cell motility (GO:0060285), axonemal dynein complex assembly (GO:0070286)
GO Molecular Function (1): protein binding (GO:0005515)
GO Cellular Component (8): axonemal dynein complex (GO:0005858), axoneme (GO:0005930), motile cilium (GO:0031514), ciliary basal body (GO:0036064), cytoplasm (GO:0005737), cytoskeleton (GO:0005856), cilium (GO:0005929), cell projection (GO:0042995)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 3 |
| cilium movement | 2 |
| axoneme assembly | 2 |
| cilium | 2 |
| regulation of microtubule-based movement | 1 |
| intraciliary transport involved in cilium assembly | 1 |
| cilium organization | 1 |
| protein localization to cilium | 1 |
| organelle assembly | 1 |
| trans-Golgi to periciliary membrane compartment transport | 1 |
| plasma membrane bounded cell projection assembly | 1 |
| ciliary transition zone assembly | 1 |
| cilium or flagellum-dependent cell motility | 1 |
| protein-containing complex assembly | 1 |
| binding | 1 |
| axoneme | 1 |
| dynein complex | 1 |
| cytoskeleton | 1 |
| microtubule | 1 |
| ciliary plasm | 1 |
| microtubule organizing center | 1 |
| intracellular anatomical structure | 1 |
| intracellular membraneless organelle | 1 |
| intraciliary transport particle | 1 |
| membrane-bounded organelle | 1 |
| plasma membrane bounded cell projection | 1 |
Protein interactions and networks
STRING
1227 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| DRC2 | DRC4 | O95995 | 908 |
| DRC2 | DRC1 | Q96MC2 | 876 |
| DRC2 | CCDC40 | Q4G0X9 | 867 |
| DRC2 | CCDC39 | Q9UFE4 | 855 |
| DRC2 | DRC7 | Q8IY82 | 829 |
| DRC2 | SERPINE2 | P07093 | 790 |
| DRC2 | RSPH9 | Q9H1X1 | 790 |
| DRC2 | DRC5 | Q5JU00 | 779 |
| DRC2 | DNAAF11 | Q86X45 | 766 |
| DRC2 | RBM45 | Q8IUH3 | 741 |
| DRC2 | CFAP298 | P57076 | 741 |
| DRC2 | RSPH4A | Q5TD94 | 737 |
| DRC2 | DNAAF5 | Q86Y56 | 714 |
| DRC2 | RSPH1 | Q8WYR4 | 712 |
| DRC2 | DNAAF19 | Q8IW40 | 711 |
IntAct
5 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| CCDC65 | MRPL12 | psi-mi:“MI:0915”(physical association) | 0.400 |
| CCDC65 | NCL | psi-mi:“MI:0915”(physical association) | 0.400 |
| CCDC65 | SLTM | psi-mi:“MI:0915”(physical association) | 0.400 |
| CCDC65 | MYCBP2 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (29): HERC1 (Affinity Capture-MS), MYCBP2 (Affinity Capture-MS), PCM1 (Affinity Capture-MS), NEURL4 (Affinity Capture-MS), HERC2 (Affinity Capture-MS), CCDC65 (Proximity Label-MS), CCDC65 (Proximity Label-MS), SLTM (Proximity Label-MS), MYCBP2 (Affinity Capture-MS), HERC2 (Affinity Capture-MS), HERC1 (Affinity Capture-MS), PCM1 (Affinity Capture-MS), NEURL4 (Affinity Capture-MS), ENO1 (Affinity Capture-MS), ENO1 (Affinity Capture-Western)
ESM2 similar proteins: A0A0R4IFG5, A0A480NP79, A0A974E306, A0AUP1, A0AUT1, A0JLY1, A4IJ21, A8I9E8, A8IRJ7, B0W6N3, B4GDX4, B4K250, B4NIC3, B4PTS9, E1BJL9, F1N7G5, Q0VC09, Q0VFZ6, Q173M7, Q1RM03, Q295G5, Q2KIQ2, Q2TA16, Q32LJ7, Q32LN4, Q3TVW5, Q4R698, Q4R7G7, Q4R7T8, Q5RE49, Q5XIN9, Q61884, Q6AXN9, Q6AXQ8, Q6AYL4, Q6PBA8, Q7PGE8, Q7Z4T9, Q8BRC6, Q8IXS2
Diamond homologs: A8JB22, Q2TA16, Q4R7G7, Q5XIJ8, Q8IXS2, Q8VHI7, Q6DHI2
SIGNOR signaling
1 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| CCDC65 | “form complex” | “Nexin-dynein regulatory complex” | binding |
Disease & clinical
Clinical variants and AI predictions
ClinVar
281 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 15 |
| Likely pathogenic | 4 |
| Uncertain significance | 120 |
| Likely benign | 82 |
| Benign | 44 |
Top pathogenic / likely-pathogenic (19)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1450804 | NM_033124.5(DRC2):c.739del (p.Leu247fs) | Pathogenic |
| 1905890 | NM_033124.5(DRC2):c.469dup (p.Arg157fs) | Pathogenic |
| 1959634 | NM_033124.5(DRC2):c.904_905del (p.Val302fs) | Pathogenic |
| 2053606 | NM_033124.5(DRC2):c.699del (p.Asn232_Tyr233insTer) | Pathogenic |
| 2156089 | NM_033124.5(DRC2):c.195G>A (p.Trp65Ter) | Pathogenic |
| 2820721 | NM_033124.5(DRC2):c.205dup (p.Leu69fs) | Pathogenic |
| 2916429 | NM_033124.5(DRC2):c.968_971del (p.Val323fs) | Pathogenic |
| 3620853 | NM_033124.5(DRC2):c.339C>G (p.Tyr113Ter) | Pathogenic |
| 3667024 | NM_033124.5(DRC2):c.710_711del (p.Thr237fs) | Pathogenic |
| 3688873 | NM_033124.5(DRC2):c.966dup (p.Val323fs) | Pathogenic |
| 474640 | NM_033124.5(DRC2):c.494del (p.Glu165fs) | Pathogenic |
| 4788719 | NM_033124.5(DRC2):c.339C>A (p.Tyr113Ter) | Pathogenic |
| 4789177 | NM_033124.5(DRC2):c.805C>T (p.Gln269Ter) | Pathogenic |
| 644753 | NM_033124.5(DRC2):c.718C>T (p.Arg240Ter) | Pathogenic |
| 649817 | NM_033124.5(DRC2):c.658G>T (p.Glu220Ter) | Pathogenic |
| 1508617 | NM_033124.5(DRC2):c.470+1G>A | Likely pathogenic |
| 2053470 | NM_033124.5(DRC2):c.301-2A>C | Likely pathogenic |
| 3367020 | NM_033124.5(CCDC65):c.876T>G (p.Tyr292Ter) | Likely pathogenic |
| 4793393 | NM_033124.5(DRC2):c.807+1G>C | Likely pathogenic |
SpliceAI
3118 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 12:48904469:G:GA | donor_loss | 1.0000 |
| 12:48905110:CAAG:C | donor_loss | 1.0000 |
| 12:48905111:AAGG:A | donor_loss | 1.0000 |
| 12:48914402:A:AG | acceptor_gain | 1.0000 |
| 12:48914403:G:GG | acceptor_gain | 1.0000 |
| 12:48914522:A:T | donor_gain | 1.0000 |
| 12:48914542:G:GT | donor_gain | 1.0000 |
| 12:48914556:G:GT | donor_gain | 1.0000 |
| 12:48914557:GAGTT:G | donor_gain | 1.0000 |
| 12:48914569:GAAAG:G | donor_gain | 1.0000 |
| 12:48914575:T:G | donor_loss | 1.0000 |
| 12:48918259:T:TA | acceptor_gain | 1.0000 |
| 12:48918260:G:A | acceptor_gain | 1.0000 |
| 12:48918440:G:GT | donor_gain | 1.0000 |
| 12:48918472:GGTT:G | donor_loss | 1.0000 |
| 12:48918473:GTTA:G | donor_loss | 1.0000 |
| 12:48918769:G:GT | donor_gain | 1.0000 |
| 12:48918860:A:T | donor_gain | 1.0000 |
| 12:48920924:A:AG | acceptor_gain | 1.0000 |
| 12:48920925:A:G | acceptor_gain | 1.0000 |
| 12:48920925:AATAG:A | acceptor_gain | 1.0000 |
| 12:48920926:ATAG:A | acceptor_gain | 1.0000 |
| 12:48920927:TAG:T | acceptor_loss | 1.0000 |
| 12:48920928:A:AG | acceptor_gain | 1.0000 |
| 12:48920928:A:AT | acceptor_loss | 1.0000 |
| 12:48920928:AG:A | acceptor_gain | 1.0000 |
| 12:48920928:AGG:A | acceptor_gain | 1.0000 |
| 12:48920928:AGGGT:A | acceptor_gain | 1.0000 |
| 12:48920929:G:A | acceptor_gain | 1.0000 |
| 12:48920929:G:GG | acceptor_gain | 1.0000 |
AlphaMissense
3244 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 12:48914428:G:C | A109P | 0.987 |
| 12:48905006:T:A | W65R | 0.982 |
| 12:48905006:T:C | W65R | 0.982 |
| 12:48905043:T:C | L77P | 0.982 |
| 12:48905022:G:C | R70P | 0.981 |
| 12:48905082:G:C | R90P | 0.981 |
| 12:48914420:T:C | L106P | 0.973 |
| 12:48905019:T:C | L69P | 0.972 |
| 12:48905064:T:C | L84P | 0.969 |
| 12:48914483:T:C | L127P | 0.967 |
| 12:48914504:G:C | R134P | 0.966 |
| 12:48914449:G:C | A116P | 0.964 |
| 12:48905008:G:C | W65C | 0.963 |
| 12:48905008:G:T | W65C | 0.963 |
| 12:48921295:T:C | L436P | 0.963 |
| 12:48918851:T:C | L325P | 0.962 |
| 12:48918884:T:C | L336P | 0.962 |
| 12:48905032:G:C | K73N | 0.959 |
| 12:48905032:G:T | K73N | 0.959 |
| 12:48905075:T:C | F88L | 0.958 |
| 12:48905077:T:A | F88L | 0.958 |
| 12:48905077:T:G | F88L | 0.958 |
| 12:48921198:T:C | F404L | 0.956 |
| 12:48921200:C:A | F404L | 0.956 |
| 12:48921200:C:G | F404L | 0.956 |
| 12:48920974:A:C | E357D | 0.954 |
| 12:48920974:A:T | E357D | 0.954 |
| 12:48921283:T:C | L432P | 0.954 |
| 12:48905098:G:C | K95N | 0.953 |
| 12:48905098:G:T | K95N | 0.953 |
dbSNP variants (sampled 300 via entrez): RS1000303832 (12:48919016 A>G), RS1000351565 (12:48911843 A>G), RS1000850419 (12:48912474 G>C,T), RS1000914304 (12:48920713 G>A), RS1001013623 (12:48905626 A>G), RS1001074566 (12:48919883 G>A), RS1001715777 (12:48908040 C>G), RS1001785117 (12:48913517 G>A), RS1001822405 (12:48905529 C>A,G,T), RS1001891304 (12:48912540 G>A), RS1002141136 (12:48919461 A>G,T), RS1002408719 (12:48919629 T>A,C), RS1002467821 (12:48921825 G>A), RS1002551306 (12:48903349 T>G), RS1002679403 (12:48909321 G>A)
Disease associations
OMIM: gene MIM:611088 | disease phenotypes: MIM:615504, MIM:244400
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| primary ciliary dyskinesia 27 | Definitive | Autosomal recessive |
| primary ciliary dyskinesia | Supportive | Autosomal dominant |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| primary ciliary dyskinesia 27 | Definitive | AR |
Mondo (2): primary ciliary dyskinesia 27 (MONDO:0014215), primary ciliary dyskinesia (MONDO:0016575)
Orphanet (1): Primary ciliary dyskinesia (Orphanet:244)
HPO phenotypes
56 total (30 of 56 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000119 | Abnormality of the genitourinary system |
| HP:0000238 | Hydrocephalus |
| HP:0000365 | Hearing impairment |
| HP:0000389 | Chronic otitis media |
| HP:0000403 | Recurrent otitis media |
| HP:0000405 | Conductive hearing impairment |
| HP:0000510 | Rod-cone dystrophy |
| HP:0000750 | Delayed speech and language development |
| HP:0000924 | Abnormality of the skeletal system |
| HP:0001217 | Clubbing |
| HP:0001627 | Abnormal heart morphology |
| HP:0001669 | Transposition of the great arteries |
| HP:0001696 | Situs inversus totalis |
| HP:0001719 | Double outlet right ventricle |
| HP:0001742 | Nasal congestion |
| HP:0001746 | Asplenia |
| HP:0001748 | Polysplenia |
| HP:0002011 | Morphological central nervous system abnormality |
| HP:0002110 | Bronchiectasis |
| HP:0002119 | Ventriculomegaly |
| HP:0002205 | Recurrent respiratory infections |
| HP:0002257 | Chronic rhinitis |
| HP:0002566 | Intestinal malrotation |
| HP:0002643 | Neonatal respiratory distress |
| HP:0002878 | Respiratory failure |
| HP:0003251 | Male infertility |
| HP:0003593 | Infantile onset |
| HP:0004469 | Chronic bronchitis |
| HP:0005301 | Persistent left superior vena cava |
GWAS associations
1 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST007269_51 | Pulse pressure | 4.000000e-14 |
EFO canonical traits (1, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0005763 | pulse pressure measurement |
MeSH disease descriptors (2)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D002925 | Ciliary Motility Disorders | C08.200; C09.150; C16.131.077.245.500; C16.320.184.500 |
| D007619 | Kartagener Syndrome | C08.127.384.500; C08.200.531; C08.695.501; C09.150.531; C14.240.400.280.500; C14.280.400.280.500; C16.131.077.245.500.531; C16.131.240.400.280.500; C16.131.740.501; C16.131.810.250.500; C16.320.184.500.531; C16.320.480 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
20 total (human), top 20 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| aristolochic acid I | increases expression | 1 |
| GSK-J4 | decreases expression | 1 |
| bisphenol A | decreases methylation | 1 |
| 2,4,5,2’,4’,5’-hexachlorobiphenyl | decreases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| 2-palmitoylglycerol | increases expression | 1 |
| abrine | increases expression | 1 |
| jinfukang | affects cotreatment, decreases expression | 1 |
| (+)-JQ1 compound | decreases expression | 1 |
| theaflavin-3,3’-digallate | affects expression | 1 |
| Air Pollutants | increases abundance, increases expression | 1 |
| Benzo(a)pyrene | increases methylation | 1 |
| Cisplatin | affects cotreatment, decreases expression | 1 |
| Methyl Methanesulfonate | increases expression | 1 |
| Rotenone | decreases expression | 1 |
| Smoke | increases abundance, increases expression | 1 |
| Tetrachlorodibenzodioxin | affects expression | 1 |
| Tobacco Smoke Pollution | decreases expression | 1 |
| Acrylamide | decreases expression | 1 |
| Particulate Matter | affects expression | 1 |
Clinical trials (associated diseases)
71 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT02871778 | PHASE2 | COMPLETED | Clearing Lungs With ENaC Inhibition in Primary Ciliary Dyskinesia |
| NCT07318974 | PHASE2 | ACTIVE_NOT_RECRUITING | Melatonin Therapy for Improving ICSI Outcomes in Women With Diminished Ovarian Reserve |
| NCT05737485 | PHASE1 | COMPLETED | Study Evaluating the Safety and Tolerability of RCT1100 in Healthy and PCD Subjects |
| NCT06600425 | PHASE1 | COMPLETED | A Study to Assess the Safety, Tolerability, Ciliary Rescue, and Pharmacodynamics of RCT1100 in Adults With PCD |
| NCT06633757 | PHASE1 | COMPLETED | Study of Inhaled RCT1100 in Adults With PCD Caused by Pathogenic Mutations in the DNAI1 Gene to Measure Mucociliary Clearance |
| NCT04901715 | EARLY_PHASE1 | COMPLETED | Functional Studies of Novel Genes Mutated in Primary Ciliary Dyskinesia II: Genotype to Phenotype |
| NCT00005650 | Not specified | COMPLETED | Genetic Study of Patients With Primary Ciliary Dyskinesia |
| NCT00323167 | Not specified | COMPLETED | Rare Genetic Disorders of the Breathing Airways |
| NCT00368446 | Not specified | COMPLETED | Genetic Disorders of Mucociliary Clearance in Nontuberculous Mycobacterial Lung Disease |
| NCT00450918 | Not specified | COMPLETED | Evaluating Progression of and Diagnostic Tools for Primary Ciliary Dyskinesia in Children and Adolescents |
| NCT00608556 | Not specified | COMPLETED | Dyskinesia, Heterotaxy and Congenital Heart Disease |
| NCT00686309 | Not specified | UNKNOWN | Comparison of On-line and Off-line Measurements of Exhaled Nitric Oxide (NO) |
| NCT00722878 | Not specified | COMPLETED | Long-term Lung Function and Disease Progression in Children With Early Onset Primary Ciliary Dyskinesia Lung Disease |
| NCT00739817 | Not specified | UNKNOWN | Screening for Primary Ciliary Dyskinesia Using Nasal Nitric Oxide |
| NCT00783887 | Not specified | COMPLETED | Diagnosis of Primary Ciliary Dyskinesia |
| NCT00807482 | Not specified | RECRUITING | Pathogenesis of Primary Ciliary Dyskinesia (PCD) Lung Disease |
| NCT01070914 | Not specified | UNKNOWN | Early Detection and Characterization of Primary Ciliary Dyskinesia |
| NCT01155115 | Not specified | COMPLETED | Inflammatory and Microbiologic Markers in Sputum: Comparing Cystic Fibrosis With Primary Ciliary Dyskinesia |
| NCT01246258 | Not specified | COMPLETED | Otolith Function in Patients With Primary Ciliary Dyskinesia |
| NCT01929356 | Not specified | RECRUITING | Chest Physiotherapy and Lung Function in Primary Ciliary Dyskinesia |
| NCT02389049 | Not specified | COMPLETED | Genetics of Primary Ciliary Dyskinesia |
| NCT02419365 | Not specified | RECRUITING | International Primary Ciliary Dyskinesia (PCD) Registry |
| NCT02699177 | Not specified | UNKNOWN | In Vivo Measurements of Nasal Ciliary Beat Frequency by Using Interferometry |
| NCT02704455 | Not specified | NOT_YET_RECRUITING | Registry Study on Primary Ciliary Dyskinesia in Chinese Children |
| NCT03271840 | Not specified | COMPLETED | Registry for Primary Ciliary Dyskinesia |
| NCT03279965 | Not specified | UNKNOWN | MRI in Cystic Fibrosis and Primary Ciliary Dyskinesia |
| NCT03320382 | Not specified | UNKNOWN | Multiple Breath Washout, a Clinimetric Dataset |
| NCT03370029 | Not specified | COMPLETED | Respiratory Muscle Strength, Exercise Capacity and Physical Activity Levels in Children Primary Ciliary Dyskinesia |
| NCT03494894 | Not specified | COMPLETED | Bacteriological Link Between Upper and Lower Airways in Cystic Fibrosis and Primary Ciliary Dyskinesia |
| NCT03517865 | Not specified | ACTIVE_NOT_RECRUITING | International Primary Ciliary Dyskinesia Cohort |
| NCT03606200 | Not specified | RECRUITING | Swiss Primary Ciliary Dyskinesia Registry |
| NCT03704207 | Not specified | RECRUITING | Utility of PCD Diagnostics to Improve Clinical Care |
| NCT03704896 | Not specified | UNKNOWN | PRospective Observational Multicentre Study on VAriability of Lung Function in Stable PCD Patients |
| NCT03801395 | Not specified | COMPLETED | PCD New Gene Discovery |
| NCT03809091 | Not specified | UNKNOWN | WGS of Korean Idiopathic Bronchiectasis |
| NCT03832491 | Not specified | COMPLETED | Effect of Game Based Approach on Oxygenation, Functional Capacity and Quality of Life in Primary Ciliary Dyskinesia |
| NCT04161313 | Not specified | COMPLETED | Respiratory Function, Exercise Capacity and Peripheral Muscle Strength Among Patients With CF, PCD and Healthy Children |
| NCT04476433 | Not specified | COMPLETED | Intervention in Chronic Pediatric Patients and Their Families. |
| NCT04489472 | Not specified | UNKNOWN | The Effect of a Dietary Supplement Rich in Nitric Oxide in Patients Diagnosed With Primary Ciliary Dyskinesia. |
| NCT04602481 | Not specified | RECRUITING | Living With Primary Ciliary Dyskinesia (Living With PCD) |
Related Atlas pages
- Associated diseases: primary ciliary dyskinesia 27, primary ciliary dyskinesia
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): primary ciliary dyskinesia, primary ciliary dyskinesia 27