DSC2

gene
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Also known as CDHF2

Summary

DSC2 (desmocollin 2, HGNC:3036) is a protein-coding gene on chromosome 18q12.1, encoding Desmocollin-2 (Q02487). A component of desmosome cell-cell junctions which are required for positive regulation of cellular adhesion.

This gene encodes a member of the desmocollin protein subfamily. Desmocollins, along with desmogleins, are cadherin-like transmembrane glycoproteins that are major components of the desmosome. Desmosomes are cell-cell junctions that help resist shearing forces and are found in high concentrations in cells subject to mechanical stress. This gene is found in a cluster with other desmocollin family members on chromosome 18. Mutations in this gene are associated with arrhythmogenic right ventricular dysplasia-11, and reduced protein expression has been described in several types of cancer. Alternative splicing results in multiple transcript variants.

Source: NCBI Gene 1824 — RefSeq curated summary.

At a glance

  • Gene–disease (curated): familial isolated arrhythmogenic right ventricular dysplasia (Definitive, ClinGen) — +2 more curated relationships
  • Clinical variants (ClinVar): 2,091 total — 60 pathogenic, 37 likely-pathogenic
  • Phenotypes (HPO): 14
  • MANE Select transcript: NM_024422

Identifiers

Gene identifiers

FieldValue
HGNC IDHGNC:3036
Approved symbolDSC2
Namedesmocollin 2
Location18q12.1
Locus typegene with protein product
StatusApproved
AliasesCDHF2
Ensembl geneENSG00000134755
Ensembl biotypeprotein_coding
OMIM125645
Entrez1824

Gene structure

Transcript identifiers

Ensembl transcripts: 25 — 22 protein_coding, 2 nonsense_mediated_decay, 1 non_stop_decay

ENST00000251081, ENST00000280904, ENST00000648081, ENST00000682357, ENST00000713681, ENST00000713682, ENST00000713683, ENST00000713684, ENST00000713685, ENST00000713686, ENST00000713702, ENST00000713703, ENST00000713704, ENST00000713705, ENST00000713706, ENST00000713707, ENST00000713708, ENST00000713709, ENST00000713720, ENST00000713721, ENST00000713722, ENST00000850650, ENST00000850651, ENST00000861946, ENST00000861947

RefSeq mRNA: 4 — MANE Select: NM_024422 NM_001406506, NM_001406507, NM_004949, NM_024422

CCDS: CCDS11892, CCDS11893, CCDS92447

Canonical transcript exons

ENST00000280904 — 16 exons

ExonStartEnd
ENSE000004565053109210131092300
ENSE000006675683108009631080352
ENSE000006675693108223831082423
ENSE000006675723108766931087813
ENSE000006675743109102831091147
ENSE000007968793109355931093643
ENSE000007968823108943931089594
ENSE000007968843108657631086742
ENSE000007968853108292631083060
ENSE000009160033106889431069151
ENSE000009160043107072631070850
ENSE000009160053107160531071841
ENSE000009985563107468331074907
ENSE000009985653107984731079989
ENSE000018387853105884031068212
ENSE000038898753110190331102421

Expression profiles

Bgee: expression breadth ubiquitous, 256 present calls, max score 99.86.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 17.3847 / max 894.2601, expressed in 1083 samples.

FANTOM5 promoters (12 alternative TSS)

Promoter IDTPM avgSamples expressed
1715495.5779857
1715584.1995825
1715502.7726553
1715551.8822252
1715571.3062543
1715560.3684164
1715520.3161138
1715480.2471130
2085260.2414111
1715510.192297

Top tissues by expression

290 total, by Bgee expression score (0-100, higher = more expressed):

TissueAnatomy IDExpression scoreQuality
gingival epitheliumUBERON:000194999.86gold quality
gingivaUBERON:000182899.81gold quality
oral cavityUBERON:000016799.47gold quality
tongue squamous epitheliumUBERON:000691999.45gold quality
squamous epitheliumUBERON:000691499.44gold quality
esophagus squamous epitheliumUBERON:000692099.44gold quality
pharyngeal mucosaUBERON:000035599.33gold quality
mucosa of sigmoid colonUBERON:000499399.04gold quality
jejunal mucosaUBERON:000039999.03gold quality
colonic mucosaUBERON:000031798.90gold quality
cervix squamous epitheliumUBERON:000692298.69gold quality
body of tongueUBERON:001187698.66gold quality
epithelium of esophagusUBERON:000197698.27gold quality
penisUBERON:000098998.08gold quality
mammalian vulvaUBERON:000099797.54gold quality
esophagus mucosaUBERON:000246997.47gold quality
tongueUBERON:000172397.30gold quality
lower esophagus mucosaUBERON:003583496.83gold quality
cervix epitheliumUBERON:000480196.81gold quality
parotid glandUBERON:000183196.65gold quality
amniotic fluidUBERON:000017396.56gold quality
upper leg skinUBERON:000426296.09gold quality
tonsilUBERON:000237295.61gold quality
rectumUBERON:000105295.11gold quality
superior surface of tongueUBERON:000737195.06gold quality
duodenumUBERON:000211494.73gold quality
epithelium of nasopharynxUBERON:000195194.03gold quality
mammary ductUBERON:000176593.46gold quality
germinal epithelium of ovaryUBERON:000130493.19gold quality
mucosa of transverse colonUBERON:000499193.02gold quality

Single-cell (SCXA)

Detected in 7 experiment(s), a significant marker in 5.

ExperimentMarker?Max mean expression
E-MTAB-8142yes772.91
E-MTAB-6701yes75.70
E-GEOD-125970yes15.83
E-MTAB-9388yes6.53
E-MTAB-10596no1122.45
E-GEOD-110499no32.93
E-ANND-3no0.00

Regulation

Is transcription factor: no

miRNA regulators (miRDB)

142 targeting DSC2, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):

miRNAMax scoreAvg scoremiRNA target_count
HSA-MIR-4795-3P100.0074.624024
HSA-MIR-1277-5P100.0073.955056
HSA-MIR-3163100.0077.238605
HSA-MIR-3646100.0073.565283
HSA-MIR-5692A100.0074.406850
HSA-MIR-190A-3P100.0080.355520
HSA-MIR-8485100.0077.574731
HSA-MIR-3613-3P100.0076.367965
HSA-MIR-126-5P100.0072.713180
HSA-MIR-428299.9975.366408
HSA-MIR-548C-3P99.9974.017587
HSA-MIR-366299.9973.825684
HSA-MIR-196A-1-3P99.9972.152772
HSA-MIR-32-5P99.9875.211964
HSA-MIR-92A-3P99.9875.211960
HSA-MIR-92B-3P99.9875.251955
HSA-MIR-25-3P99.9874.601817
HSA-MIR-363-3P99.9874.721821
HSA-MIR-367-3P99.9874.831819
HSA-MIR-477599.9875.006394
HSA-MIR-3688-3P99.9772.022834
HSA-MIR-60799.9773.625593
HSA-MIR-548AJ-3P99.9673.385345
HSA-MIR-548X-3P99.9673.385345
HSA-MIR-9-3P99.9670.882068
HSA-MIR-4666A-3P99.9671.713434
HSA-MIR-590-3P99.9674.346478
HSA-MIR-3912-5P99.9566.11925
HSA-MIR-23A-3P99.9574.243163
HSA-MIR-23B-3P99.9574.243163

Literature-anchored findings (GeneRIF, showing 40)

  • cpo has a role in regulating proper nervous system function, including seizure susceptibility (PMID:15687283)
  • variation for the diapause phenotype is caused by a single Lys/Ile substitution in one of the six cpo transcripts (PMID:18852464)
  • There is no evidence for an association between the cpo I462K polymorphism and ovarian dormancy in Australian fruit flies. (PMID:21689187)
  • The results reveal that the downstream cpo SNP does not seem to play any role in diapause induction in European Drosophila populations in contrast to the upstream coding cpo SNP. (PMID:27598401)
  • Conserved binding of GCAC motifs by MEC-8, couch potato, and the RBPMS protein family has been reported (PMID:28003515)
  • Loss of Dsc2 protein is associated with colorectal cancer (PMID:17088906)
  • DSC2 mutations are a cause of arrhythmogenic right ventricular cardiomyopathy in humans, physiologic levels of DSC2 are crucial for normal cardiac desmosome formation, early cardiac morphogenesis, and cardiac function. (PMID:17186466)
  • The two missense mutations in the N-terminal domain affect the normal localisation of DSC2, thus suggesting the potential pathogenic effect of the reported mutations (PMID:17963498)
  • Mutations in the desmosome genes were identified in four of the five patients (three with a DSG2 mutation and one with a DSP mutation). Five gene mutations were noted in four patients and all mutations were novel (one patient had a DSG2 double mutation). (PMID:18632414)
  • Repression of the desmocollin 2 gene expression in human colon cancer cells is relieved by the homeodomain transcription factors Cdx1 and Cdx2. (PMID:18819935)
  • mutation associated with autosomal recessive arrhythmogenic right ventricular cardiomyopathy (PMID:18957847)
  • Mutations in DSG2 and DSC2 are less prevalent than PKP2 mutations in Dutch arrhythmogenic right ventricular dysplasia/cardiomypath patients. (PMID:20031616)
  • DSC2 gene mutations are not frequently involved in arrhythmogenic right ventricular cardiomyopathy/dysplasia. (PMID:20197793)
  • Desmocollin 2 is involved in the transformation and development of esophageal tumors and that desmocollin 2 expression level and intracellular localization may serve as a predictor for patient outcomes. (PMID:20621329)
  • Studies identified two mutations in DSG2, four in DSC2, two in DSP, four in JUP and seven in PKP2. (PMID:20864495)
  • Report mechanistic insights into arrhythmogenic right ventricular cardiomyopathy caused by desmocollin-2 mutations. (PMID:21062920)
  • At the molecular level, altered binding properties of the desmocollin-2a mutant may contribute to the changes in connexin43 (PMID:21220045)
  • Loss of Desmocollin2 promotes cell proliferation and enables tumor growth in vivo through the activation of Akt/beta-catenin signaling. (PMID:21325624)
  • DSC2 is a useful immunohistochemical marker for separation of Urothelial carcinoma with squamous differentiation from pure Urothelial carcinoma (PMID:22014052)
  • The Dsc2 exhibit microtubule-dependent transport in epithelial cells but use distinct motors to traffic to the plasma membrane. (PMID:22184201)
  • High expression of desmocollin 1 (DSC1) was observed in 41.6%, DSC2 in 58.0%, DSC3 in 61.4%, E-cadherin in 71.4%, CDX2 in 58.0%, PITX1 in 55.0%, CDK4 in 0.2%, TLE1 in 1.3%, Factor H in 42.5%, and MDM2 in 0.2% of colorectal carcinomas. (PMID:22438068)
  • results suggest that abnormal activation of beta-catenin contributes to adenomyosis development through the induction of epithelial-mesenchymal transition (PMID:23836524)
  • A homozygous truncation mutation, c.1660C>T (p.Q554X) in desmocollin-2 (DSC2) was idnetified in affected individuals and determined a carrier frequency of this mutation of 9.4% among 1535 Schmiedeleut Hutterites. (PMID:23863954)
  • Low expression of DSC 1, 2, and 3 was observed in 55, 54, and 79 % of liver metastases. (PMID:23975055)
  • Reduced cardiac desmoglein-2 and desmocollin-2 levels appear to be specifically associated with Arrhythmogenic right ventricular Dysplasia/cardiomyopathy, independent of underlying mutations. (PMID:24086444)
  • Data demonstrate that partner desmosomal cadherins Dsg2 and Dsc2 play opposing roles in controlling colonic carcinoma cell proliferation through differential effects on EGFR signaling. (PMID:24166502)
  • Case of arrhythmogenic right ventricular cardiomyopathy with a previously unreported desmocollin-2 mutation (c.712_714delGAT). This genetic variant displays autosomal recessive inheritance without the cutaneous manifestations. (PMID:24793512)
  • DSC2 may be involved in the regulation of the invasive behavior of cells by a mechanism that controls cellcell attachment and cytoskeleton rearrangement (PMID:25119898)
  • a novel Nrf2-miR-29-Dsc2 axis controls desmosome function and cutaneous homeostasis (PMID:25283360)
  • ECG reliably identifies homozygous p.Gln554X desmocollin-2 carriers and may be useful as an initial step in the screening of high-risk Hutterites. (PMID:25497880)
  • Desmocollin-2 mutations are described for dilated cardiomyopathy and arrhythmogenic right ventricular cardiomyopathy, as well. Desmocollin-2 mutation was described in a case of arrhythmogenic biventricular cardiomyopathy (PMID:25576714)
  • DSC2 promoter methylation is associated with Breast Cancer. (PMID:25809865)
  • Data suggest juxtamembrane regions/domains of desmocollin-2 (DSC2), plakophilin 2 (PKP2), and plakophilin 3 (PKP3) are involved in desmosome formation in epithelial cells; DSC2 participates in desmosome formation in absence of desmoglein 2 (DSG2). (PMID:25972099)
  • Homozygous founder mutation in DSC2 gene identified among Italian arrhythmogenic cardiomyopathy probands, providing evidence of the occurrence of recessive DSC2 mutations presenting with biventricular forms of the disease. (PMID:26310507)
  • Oxidized low-density lipoprotein attenuated desmoglein 1 and desmocollin 2 expression in human umbilical vein endothelial cells. (PMID:26498522)
  • Desmocollin-2 genetic variant contributes to Arrhythmogenic Right Ventricular Cardiomyopathy (PMID:27531918)
  • A novel missense mutation (c.1090 G > A/p.V364 M) of DSC2 was identified in a Chinese family with arrhythmogenic right ventricular cardiomyopathy. (PMID:28256248)
  • The cardiac specific DSC2 transgenic mice develop severe biventricular cardiomyopathy. (PMID:28339476)
  • PKP3 overexpression increases the stability of other desmosomal proteins independently of the increase in DSC2 levels and regulates desmosome formation and stability by a multimodal mechanism affecting transcription, protein stability and cell border localization of desmosomal proteins. (PMID:29146182)
  • Colocalization analysis using cell compartment trackers revealed that N-glycosylation- deficient DSC2 mutants were retained within the Golgi apparatus. In contrast, elimination of the four O-mannosylation sites or the disulfide bridges in the ECD has no obvious effect on the intracellular protein processing of DSC2. (PMID:30942563)

Cross-species orthologs

3 orthologs

OrganismSymbolGene ID
danio_reriodsc2lENSDARG00000039677
mus_musculusDsc2ENSMUSG00000024331
rattus_norvegicusDsc2ENSRNOG00000039969

Paralogs (6): DSG2 (ENSG00000046604), DSG3 (ENSG00000134757), DSG1 (ENSG00000134760), DSC3 (ENSG00000134762), DSC1 (ENSG00000134765), DSG4 (ENSG00000175065)

Protein

Protein identifiers

Desmocollin-2Q02487 (reviewed: Q02487)

Alternative names: Cadherin family member 2, Desmocollin-3, Desmosomal glycoprotein II, Desmosomal glycoprotein III

All UniProt accessions (16): A0A3B3ISU0, A0AAQ5BGM2, A0AAQ5BGP1, A0AAQ5BGP4, A0AAQ5BGP6, A0AAQ5BGQ1, Q02487, A0AAQ5BGQ3, A0AAQ5BGQ5, A0AAQ5BGR2, A0AAQ5BGR6, A0AAQ5BGR7, A0AAQ5BGT1, A0AAQ5BGT3, A0AAQ5BGT5, A0AAQ5BGU5

UniProt curated annotations — full annotation on UniProt →

Function. A component of desmosome cell-cell junctions which are required for positive regulation of cellular adhesion. Promotes timely incorporation of DSG2 into desmosome intercellular junctions and promotes interaction of desmosome cell junctions with intermediate filament cytokeratin, via modulation of DSP phosphorylation. Plays an important role in desmosome-mediated maintenance of intestinal epithelial cell intercellular adhesion strength and barrier function. Positively regulates wound healing of intestinal mucosa via promotion of epithelial cell migration, and also plays a role in mechanotransduction of force between intestinal epithelial cells and extracellular matrix. May contribute to epidermal cell positioning (stratification) by mediating differential adhesiveness between cells that express different isoforms. May promote p38MAPK signaling activation that facilitates keratinocyte migration.

Subunit / interactions. Interacts with DSP, PKP2 and JUP. Interacts with DSG3; the interaction may limit the interaction of DSC3 with p38MAPK family members and therefore repress p38MAPK signaling activation.

Subcellular location. Cell membrane. Cell junction. Desmosome.

Tissue specificity. Expressed at intercalated disks in the heart, where it is colocalized with CDH2 (at protein level). Expressed in intestinal mucosal cells (at protein level).

Disease relevance. Arrhythmogenic right ventricular dysplasia, familial, 11 (ARVD11) [MIM:610476] A congenital heart disease characterized by infiltration of adipose and fibrous tissue into the right ventricle and loss of myocardial cells, resulting in ventricular and supraventricular arrhythmias. The disease is caused by variants affecting the gene represented in this entry.

Domain organisation. Calcium may be bound by the cadherin-like repeats. Three calcium ions are usually bound at the interface of each cadherin domain and rigidify the connections, imparting a strong curvature to the full-length ectodomain.

Induction. Induced in the hours following cyclic mechanical strain in keratinocytes.

Miscellaneous. Expression is decreased in the intestinal mucosa of ulcerative colitis patients, potential adversely effecting wound healing of the intestinal mucosa.

Isoforms (2)

UniProt IDNamesCanonical?
Q02487-12A, DGIIyes
Q02487-22B, DGIII

RefSeq proteins (4): NP_001393435, NP_001393436, NP_004940, NP_077740* (*=MANE)

Domains & families (InterPro)

IDNameType
IPR000233Cadherin_Y-type_LIRDomain
IPR002126Cadherin-like_domDomain
IPR009122Desmosomal_cadherinFamily
IPR014868Cadherin_pro_domDomain
IPR015919Cadherin-like_sfHomologous_superfamily
IPR020894Cadherin_CSConserved_site
IPR027397Catenin-bd_sfHomologous_superfamily
IPR050971Cadherin-domain_proteinFamily

Pfam: PF00028, PF01049, PF08758

UniProt features (90 total): strand 36, sequence variant 17, turn 13, domain 5, glycosylation site 5, modified residue 3, helix 3, splice variant 2, topological domain 2, signal peptide 1, propeptide 1, chain 1, transmembrane region 1

Structure

Experimental structures (PDB)

3 structures.

PDBMethodResolution (Å)
5ERPX-RAY DIFFRACTION2.7
5J5JX-RAY DIFFRACTION3.29
7A7DELECTRON MICROSCOPY26

Predicted structure (AlphaFold)

ModelpLDDTFraction very-high
AF-Q02487-F177.260.49

Functional residue map

Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.

Post-translational modifications (3): 864, 868, 873

Glycosylation sites (5): 34, 166, 392, 546, 629

Function

Pathways and Gene Ontology

Reactome pathways

2 pathways

IDPathway
R-HSA-6805567Keratinization
R-HSA-6809371Formation of the cornified envelope

MSigDB gene sets: 424 (showing top): GOBP_EMBRYO_DEVELOPMENT_ENDING_IN_BIRTH_OR_EGG_HATCHING, GOBP_BUNDLE_OF_HIS_CELL_TO_PURKINJE_MYOCYTE_COMMUNICATION, BENPORATH_ES_WITH_H3K27ME3, GOBP_CIRCULATORY_SYSTEM_PROCESS, JAEGER_METASTASIS_DN, YANG_BREAST_CANCER_ESR1_LASER_DN, GOBP_POSITIVE_REGULATION_OF_MAPK_CASCADE, SCHLESINGER_METHYLATED_DE_NOVO_IN_CANCER, LUCAS_HNF4A_TARGETS_UP, SARRIO_EPITHELIAL_MESENCHYMAL_TRANSITION_DN, ACEVEDO_LIVER_CANCER_WITH_H3K27ME3_UP, DOANE_BREAST_CANCER_CLASSES_DN, ONDER_CDH1_TARGETS_3_DN, GOBP_REGULATION_OF_ACTIN_FILAMENT_BASED_PROCESS, CHANG_IMMORTALIZED_BY_HPV31_DN

GO Biological Process (9): cell adhesion (GO:0007155), homophilic cell-cell adhesion (GO:0007156), cellular response to starvation (GO:0009267), cardiac muscle cell-cardiac muscle cell adhesion (GO:0086042), bundle of His cell-Purkinje myocyte adhesion involved in cell communication (GO:0086073), regulation of heart rate by cardiac conduction (GO:0086091), cell-cell adhesion (GO:0098609), regulation of ventricular cardiac muscle cell action potential (GO:0098911), positive regulation of p38MAPK cascade (GO:1900745)

GO Molecular Function (4): calcium ion binding (GO:0005509), cell adhesive protein binding involved in bundle of His cell-Purkinje myocyte communication (GO:0086083), protein binding (GO:0005515), metal ion binding (GO:0046872)

GO Cellular Component (11): cornified envelope (GO:0001533), endoplasmic reticulum (GO:0005783), plasma membrane (GO:0005886), adherens junction (GO:0005912), intercalated disc (GO:0014704), desmosome (GO:0030057), cytoplasmic vesicle (GO:0031410), extracellular exosome (GO:0070062), membrane (GO:0016020), cell junction (GO:0030054), anchoring junction (GO:0070161)

Reactome top-level categories

Rollup of top-2 pathways:

CategoryPathways
Developmental Biology1
Keratinization1

GO top-level categories

Rollup of top GO terms by namespace:

CategoryTerms
cytoplasm2
cell-cell junction2
cellular anatomical structure2
cellular process1
cell-cell adhesion1
cellular response to nutrient levels1
cellular response to stress1
response to starvation1
homotypic cell-cell adhesion1
heterotypic cell-cell adhesion1
cardiac muscle cell-cardiac muscle cell adhesion1
bundle of His cell to Purkinje myocyte communication1
regulation of heart rate1
cardiac conduction1
cell adhesion1
regulation of cardiac muscle cell contraction1
ventricular cardiac muscle cell action potential1
regulation of cardiac muscle cell action potential1
p38MAPK cascade1
positive regulation of MAPK cascade1
regulation of p38MAPK cascade1
metal ion binding1
bundle of His cell-Purkinje myocyte adhesion involved in cell communication1
protein binding involved in heterotypic cell-cell adhesion1
binding1
cation binding1
plasma membrane1
endomembrane system1
intracellular membrane-bounded organelle1
membrane1
cell periphery1
cell-cell contact zone1
intracellular vesicle1
extracellular vesicle1
cell junction1

Protein interactions and networks

STRING

1352 interactions, top by confidence (×1000):

Protein AProtein BPartner UniProtScore
DSC2PKP2Q99959998
DSC2DSPP15924993
DSC2DSG2Q14126987
DSC2JUPP14923941
DSC2TMEM43Q9BTV4933
DSC2DSG3P32926814
DSC2RYR2Q92736770
DSC2TGFB3P10600755
DSC2PKP3Q9Y446751
DSC2SOCS6O14544724
DSC2LMNAP02545718
DSC2LPAR6P43657684
DSC2GJA1P17302680
DSC2PKP1Q13835667
DSC2KLHL1Q9NR64648

IntAct

98 interactions, top by confidence:

ABTypeScore
CFTRESYT2psi-mi:“MI:2364”(proximity)0.710
NCBP2KPNA3psi-mi:“MI:0914”(association)0.640
DSC2DSG2psi-mi:“MI:0407”(direct interaction)0.610
DSG2DSC2psi-mi:“MI:0915”(physical association)0.610
TMEM30BKLRG2psi-mi:“MI:0914”(association)0.530
GMCL1A2ML1psi-mi:“MI:0914”(association)0.530
TAFA4NRP1psi-mi:“MI:0914”(association)0.530
FBXO2TMEM131Lpsi-mi:“MI:0914”(association)0.530
CMA1MANBApsi-mi:“MI:0914”(association)0.530
LILRA3LILRA1psi-mi:“MI:0914”(association)0.530
NRASESYT2psi-mi:“MI:2364”(proximity)0.480
DSC2DSG1psi-mi:“MI:0407”(direct interaction)0.440
PI4KAA2ML1psi-mi:“MI:0914”(association)0.350
TIFABDDX3Xpsi-mi:“MI:0914”(association)0.350
NCAPD3NDUFS8psi-mi:“MI:0914”(association)0.350
GABARAPL1psi-mi:“MI:0914”(association)0.350
ATG16L1psi-mi:“MI:0914”(association)0.350
SRRTA2ML1psi-mi:“MI:0914”(association)0.350
PI4KAP1A2ML1psi-mi:“MI:0914”(association)0.350
GOT1A2ML1psi-mi:“MI:0914”(association)0.350
KIR2DL4GPR89Apsi-mi:“MI:0914”(association)0.350
EDDM3APLXNA2psi-mi:“MI:0914”(association)0.350
NRSN1IGLC7psi-mi:“MI:0914”(association)0.350
SSUH2IGLC7psi-mi:“MI:0914”(association)0.350
CERS3IGLC7psi-mi:“MI:0914”(association)0.350

BioGRID (209): DSC2 (Affinity Capture-MS), DSC2 (Biochemical Activity), DSC2 (Proximity Label-MS), DSC2 (Proximity Label-MS), DSC2 (Affinity Capture-MS), DSC2 (Affinity Capture-MS), DSC2 (Affinity Capture-MS), DSC2 (Affinity Capture-MS), DSC2 (Affinity Capture-MS), DSC2 (Affinity Capture-MS), DSC2 (Affinity Capture-MS), DSC2 (Affinity Capture-MS), DSC2 (Proximity Label-MS), DSC2 (Proximity Label-MS), DSC2 (Proximity Label-MS)

ESM2 similar proteins: A0A8M2BIB6, F1QSQ0, F8W3X3, H2EQR6, O35902, O54800, O55111, O93319, P32926, P33545, P55280, P55285, P55286, P55287, P55288, P55289, P55292, P55849, P55850, P70407, P70408, P79995, P97291, P97326, Q01107, Q02413, Q02487, Q08554, Q08DJ5, Q13634, Q14126, Q14574, Q28060, Q3SWX5, Q5DWV1, Q5RJH3, Q61495, Q68SP4, Q6W3B0, Q7TMD7

Diamond homologs: A0A8M2BIB6, B0KW95, B2KI42, B4USZ0, F1PAA9, H2EQR6, O18926, O35902, O55075, O55111, O88277, P08641, P09803, P10287, P10288, P12830, P15116, P19022, P19534, P19535, P20310, P22223, P24503, P30944, P32926, P33145, P33146, P33147, P33148, P33150, P33152, P33545, P39038, P55283, P55290, P55291, P55292, P55849, P55850, P79883

SIGNOR signaling

0 interactions.

Enriched among interaction partners

Reactome pathways and GO biological processes over-represented among this gene’s 134 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.

Reactome pathways:

PathwayPartnersFoldFDR
Activation of BAD and translocation to mitochondria760.6×2e-09
Chk1/Chk2(Cds1) mediated inactivation of Cyclin B:Cdk1 complex753.4×3e-09
SARS-CoV-1 targets host intracellular signalling and regulatory pathways753.4×3e-09
Activation of BH3-only proteins739.5×3e-08
Intrinsic Pathway for Apoptosis826.6×4e-08
RHO GTPases activate PKNs725.2×7e-07
FOXO-mediated transcription519.1×1e-04
Apoptosis815.3×3e-06

Disease & clinical

Clinical variants and AI predictions

ClinVar

2091 variants total. Per-class counts are floors (≥ shown; pagination cap):

ClassificationCount (floor)
Pathogenic60
Likely pathogenic37
Uncertain significance1103
Likely benign571
Benign46

Top pathogenic / likely-pathogenic (30)

Variant IDHGVSClassification
1068704NM_024422.6(DSC2):c.729del (p.Phe243fs)Pathogenic
1074769NM_024422.6(DSC2):c.110_114del (p.Leu37fs)Pathogenic
1075964NM_024422.6(DSC2):c.1571del (p.Thr524fs)Pathogenic
1319918NM_024422.6(DSC2):c.685del (p.Pro228_Leu229insTer)Pathogenic
1322771NM_024422.6(DSC2):c.1858C>T (p.Gln620Ter)Pathogenic
1359544NM_024422.6(DSC2):c.1720_1733del (p.Asn573_Ser574insTer)Pathogenic
1381031NM_024422.6(DSC2):c.2136dup (p.Thr713fs)Pathogenic
1405349NM_024422.6(DSC2):c.1053_1059del (p.His351fs)Pathogenic
1429683NM_024422.6(DSC2):c.1023dup (p.Ile342fs)Pathogenic
1455627NM_024422.6(DSC2):c.1840_1841dup (p.Ser614fs)Pathogenic
16848NM_024422.6(DSC2):c.1430del (p.Thr477fs)Pathogenic
1693178NM_024422.6(DSC2):c.1577C>A (p.Ser526Ter)Pathogenic
1693187NM_024422.6(DSC2):c.501_502dup (p.Thr168fs)Pathogenic
1694869NM_024422.6(DSC2):c.1239del (p.Asn413fs)Pathogenic
1741492NM_024422.6(DSC2):c.456_458delinsCG (p.Pro153fs)Pathogenic
1749235NM_024422.6(DSC2):c.571_572dup (p.Asp191fs)Pathogenic
1750194NM_024422.6(DSC2):c.587_597del (p.Tyr196fs)Pathogenic
1779905NM_024422.6(DSC2):c.1777G>T (p.Glu593Ter)Pathogenic
1967841NM_024422.6(DSC2):c.929delinsTT (p.Gln310fs)Pathogenic
2024891NM_024422.6(DSC2):c.991C>T (p.Gln331Ter)Pathogenic
2132520NM_024422.6(DSC2):c.1260del (p.Lys421fs)Pathogenic
235909NM_024422.6(DSC2):c.1660C>T (p.Gln554Ter)Pathogenic
2413319NM_024422.6(DSC2):c.1187T>G (p.Leu396Ter)Pathogenic
2426820NC_000018.9:g.(?28681846)(28681934_?)delPathogenic
2426821NC_000018.9:g.(?28673522)(28673606_?)delPathogenic
2705962NM_024422.6(DSC2):c.1187dup (p.Leu396fs)Pathogenic
2824457NM_024422.6(DSC2):c.2203C>T (p.Gln735Ter)Pathogenic
2835126NM_024422.6(DSC2):c.2136del (p.Phe712fs)Pathogenic
2866650NM_024422.6(DSC2):c.2307T>A (p.Cys769Ter)Pathogenic
2880847NM_024422.6(DSC2):c.686del (p.Leu229fs)Pathogenic

SpliceAI

4712 predictions. Top by Δscore:

VariantEffectΔscore
18:30994251:T:TAdonor_gain1.0000
18:31001612:ACTT:Adonor_loss1.0000
18:31001614:TTA:Tdonor_loss1.0000
18:31001615:TAC:Tdonor_loss1.0000
18:31001616:A:ACdonor_gain1.0000
18:31001616:A:Cdonor_loss1.0000
18:31001616:AC:Adonor_gain1.0000
18:31001617:C:Adonor_loss1.0000
18:31001617:C:CCdonor_gain1.0000
18:31001617:CC:Cdonor_gain1.0000
18:31001617:CCA:Cdonor_gain1.0000
18:31001735:TACAG:Tacceptor_gain1.0000
18:31001737:CAG:Cacceptor_gain1.0000
18:31001745:T:TCacceptor_gain1.0000
18:31001746:T:Cacceptor_gain1.0000
18:31001746:T:TCacceptor_gain1.0000
18:31004140:A:ACdonor_gain1.0000
18:31004141:C:CCdonor_gain1.0000
18:31004141:CA:Cdonor_gain1.0000
18:31004141:CAA:Cdonor_gain1.0000
18:31004141:CAAAA:Cdonor_gain1.0000
18:31004195:A:ACdonor_gain1.0000
18:31004198:ACT:Adonor_gain1.0000
18:31004199:CTC:Cdonor_gain1.0000
18:31004200:TCCTG:Tdonor_gain1.0000
18:31004201:C:CAdonor_gain1.0000
18:31004209:C:CAdonor_gain1.0000
18:31004362:TGTAT:Tacceptor_gain1.0000
18:31004364:TAT:Tacceptor_gain1.0000
18:31004367:C:CCacceptor_gain1.0000

AlphaMissense

5901 scored. Top likely-pathogenic:

VariantProtein changeam_pathogenicity
18:31074817:C:GC585S0.999
18:31074818:A:TC585S0.999
18:31086634:A:GF295S0.999
18:31087733:A:CN237K0.999
18:31087733:A:TN237K0.999
18:31087741:C:GD235H0.999
18:31074702:C:AW623C0.998
18:31074702:C:GW623C0.998
18:31080243:A:TV458D0.998
18:31086613:C:TG302D0.998
18:31086674:A:CY282D0.998
18:31086706:T:GD271A0.998
18:31086707:C:GD271H0.998
18:31086718:G:TA267D0.998
18:31087722:G:TP241Q0.998
18:31087731:T:GD238A0.998
18:31087734:T:AN237I0.998
18:31089461:C:GR203P0.998
18:31091065:T:AE146V0.998
18:31091093:A:GW137R0.998
18:31091093:A:TW137R0.998
18:31074816:G:CC585W0.997
18:31074817:C:TC585Y0.997
18:31074818:A:GC585R0.997
18:31080237:A:TV460D0.997
18:31083024:C:GD327H0.997
18:31086607:A:CI304S0.997
18:31086607:A:TI304N0.997
18:31086613:C:AG302V0.997
18:31086673:T:GY282S0.997

dbSNP variants (sampled 300 via entrez): RS1000001010 (18:31096727 C>A,T), RS1000032096 (18:31097049 G>A), RS1000067710 (18:31095740 A>G), RS1000137518 (18:31059322 C>T), RS1000146645 (18:31090088 A>G,T), RS1000156973 (18:31063116 A>C), RS1000181717 (18:31082109 C>T), RS1000190398 (18:31059488 A>G), RS1000372893 (18:31102312 G>A), RS1000375661 (18:31065548 T>G), RS1000490164 (18:31075115 T>C,G), RS1000498331 (18:31101135 A>T), RS1000525968 (18:31058342 T>G), RS1000714538 (18:31077003 C>G,T), RS1000763858 (18:31064503 A>C)

Disease associations

OMIM: gene MIM:125645 | disease phenotypes: MIM:610476, MIM:107970, MIM:115200, MIM:192600, MIM:613426, MIM:609040, MIM:610193, MIM:612877

GenCC curated gene-disease

DiseaseClassificationInheritance
arrhythmogenic right ventricular dysplasia 11DefinitiveSemidominant
colorectal adenomaLimitedAutosomal dominant

ClinGen Gene-Disease Validity (1)

Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.

DiseaseClassificationInheritance
familial isolated arrhythmogenic right ventricular dysplasiaDefinitiveAD

Mondo (18): arrhythmogenic right ventricular dysplasia 11 (MONDO:0012506), cardiomyopathy (MONDO:0004994), familial isolated arrhythmogenic right ventricular dysplasia (MONDO:0016342), arrhythmogenic right ventricular cardiomyopathy (MONDO:0016587), dilated cardiomyopathy (MONDO:0005021), arrhythmogenic right ventricular dysplasia 1 (MONDO:0007152), cardiac rhythm disease (MONDO:0007263), long QT syndrome (MONDO:0002442), hypertrophic cardiomyopathy (MONDO:0005045), dilated cardiomyopathy 1A (MONDO:0007269), familial hypertrophic cardiomyopathy (MONDO:0024573), familial dilated cardiomyopathy (MONDO:0016333), dilated cardiomyopathy 1S (MONDO:0013262), arrhythmogenic right ventricular dysplasia 9 (MONDO:0012180), arrhythmogenic right ventricular dysplasia 10 (MONDO:0012434)

Orphanet (12): Rare cardiomyopathy (Orphanet:167848), Inherited isolated arrhythmogenic cardiomyopathy (Orphanet:217656), Inherited arrhythmogenic cardiomyopathy (Orphanet:247), Dilated cardiomyopathy (Orphanet:217604), Uhl anomaly (Orphanet:3403), Rare hypertrophic cardiomyopathy (Orphanet:217569), Familial dilated cardiomyopathy with conduction defect due to LMNA mutation (Orphanet:300751), Rare familial disorder with hypertrophic cardiomyopathy (Orphanet:99739), Familial dilated cardiomyopathy (Orphanet:217607), Familial isolated dilated cardiomyopathy (Orphanet:154), Left ventricular noncompaction (Orphanet:54260), NON RARE IN EUROPE: Familial isolated hypertrophic cardiomyopathy (Orphanet:155)

HPO phenotypes

14 total (16 of 14 shown, HPO-id order):

HPOTerm
HP:0000006Autosomal dominant inheritance
HP:0000007Autosomal recessive inheritance
HP:0000982Palmoplantar keratoderma
HP:0001279Syncope
HP:0001645Sudden cardiac death
HP:0001962Palpitations
HP:0002094Dyspnea
HP:0002224Woolly hair
HP:0003584Late onset
HP:0003596Middle age onset
HP:0003621Juvenile onset
HP:0004308Ventricular arrhythmia
HP:0011462Young adult onset
HP:0011663Right ventricular cardiomyopathy
HP:0001644Dilated cardiomyopathy
HP:0001639Hypertrophic cardiomyopathy

GWAS associations

0 associations (top):

MeSH disease descriptors (13)

DescriptorNameTree numbers
D019571Arrhythmogenic Right Ventricular DysplasiaC14.240.400.145; C14.280.238.028; C14.280.400.145; C16.131.240.400.145
D009202CardiomyopathiesC14.280.238
D002311Cardiomyopathy, DilatedC14.280.195.160; C14.280.238.070; C16.320.488.750
D002312Cardiomyopathy, HypertrophicC14.280.238.100; C14.280.484.048.750.070.160
D024741Cardiomyopathy, Hypertrophic, FamilialC14.280.238.100.500; C14.280.484.048.750.070.160.500; C16.320.160
D006323Heart ArrestC14.280.383
D008133Long QT SyndromeC14.280.067.565; C14.280.123.625; C16.131.240.400.715; C23.550.073.547
C565707Arrhythmogenic Right Ventricular Dysplasia, Familial, 10 (supp.)
C566471Arrhythmogenic Right Ventricular Dysplasia, Familial, 11 (supp.)
C563808Arrhythmogenic Right Ventricular Dysplasia, Familial, 9 (supp.)
C567877Cardiomyopathy, Dilated, 1BB (supp.)
C563538Cardiomyopathy, Dilated, 1s (supp.)
C536231familial dilated cardiomyopathy (supp.)

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 1 entry (VIP=true, CPIC=false)

CTD chemical–gene interactions

70 total (human), top 30 by PubMed support.

ChemicalActions (top 5)PubMed papers
Valproic Acidaffects cotreatment, increases expression, affects expression, decreases expression6
Tobacco Smoke Pollutionaffects expression, decreases expression, increases expression4
trichostatin Aaffects cotreatment, increases expression3
perfluorooctane sulfonic aciddecreases expression2
Vorinostataffects cotreatment, increases expression2
Panobinostataffects cotreatment, increases expression2
Arsenicaffects cotreatment, increases expression, decreases expression, increases abundance2
Benzo(a)pyrenedecreases expression, affects methylation2
Calcitrioldecreases expression, increases expression, affects cotreatment2
Cisplatinaffects cotreatment, decreases expression, affects expression, decreases response to substance2
Estradiolaffects cotreatment, increases expression, decreases expression, decreases reaction2
Phenylmercuric Acetateaffects cotreatment, increases expression2
Smokedecreases expression, increases abundance2
ammonium 2,3,3,3-tetrafluoro-2-(heptafluoropropoxy)-propanoatedecreases expression1
methylmercuric chloridedecreases expression1
methyleugenolincreases expression1
triphenyl phosphateaffects expression1
bisphenol Aincreases methylation1
sodium arsenatedecreases expression, increases abundance1
pyrogallol 1,3-dimethyl etheraffects cotreatment, increases expression, affects localization, decreases expression1
sodium arseniteincreases expression1
perfluorooctanoic aciddecreases expression1
potassium chromate(VI)increases expression1
S-(1,2-dichlorovinyl)cysteineaffects cotreatment, decreases expression1
dibenzo(a,l)pyrenedecreases expression1
di-n-butylphosphoric acidaffects expression1
3-nitrobenzanthronedecreases expression1
4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamideaffects cotreatment, increases expression1
erucylphospho-N,N,N-trimethylpropylammoniumincreases expression1
dorsomorphinaffects cotreatment, increases expression1

Cellosaurus cell lines

1 cell lines: 1 hybrid cell line

First 10 cell lines (id-ordered, not curated):

CellosaurusNameCategorySex
CVCL_E0Z6Ubigene MGC-803 DSC2 KOHybrid cell line

Clinical trials (associated diseases)

440 trials via MONDO — disease-level, not drug-specific.

TrialPhaseStatusTitle
NCT01767870PHASE4UNKNOWNEfficacy Combined Fecal Immunochemical Test-Sigmoidoscopy for the Detection of Advanced Colorectal Neoplasia
NCT07167342PHASE4RECRUITINGThe Effect of Oral Clostridium Butyricum on the Recurrence After Colonoscopic Resection of Colorectal Adenoma
NCT00348530PHASE4UNKNOWNCarvedilol Versus Verapamil in Chronic Heart Failure Secondary to Non-Ischemic Cardiomyopathy
NCT00371891PHASE4COMPLETEDOntario Multidetector Computed Tomographic (MDCT) Coronary Angiography Study (OMCAS)
NCT00401856PHASE4COMPLETEDCMR to Assess Fibrosis in Cardiomyopathy Using Eplerenone
NCT00559338PHASE4COMPLETEDImpact of Nesiritide Infusion for Decompensated Heart Failure in the Emergency Department
NCT00606775PHASE4UNKNOWNThe Preventive Efficacy of Carvedilol on Cardiac Dysfunction in Duchenne Muscular Dystrophy
NCT00658203PHASE4COMPLETEDClinical Evaluation on Advanced Resynchronization
NCT00701220PHASE4COMPLETEDStatin Therapy for Ischemic and Nonischemic Cardiomyopathy
NCT00800761PHASE4COMPLETEDIntensive Combined Chelation Therapy for Iron-Induced Cardiac Disease in Patients With Thalassemia Major
NCT00806390PHASE4TERMINATEDPrevention of Anthracycline or Trastuzumab Induced Cardiomyopathy by Metoprolol
NCT01006473PHASE4COMPLETEDExercise Training in Chagas Cardiomyopathy
NCT01261065PHASE4COMPLETEDMechanisms of Improvement With Beta-Blocker Treatment in Heart Failure
NCT01345188PHASE4COMPLETEDRanolazine in Ischemic Cardiomyopathy
NCT01868841PHASE4COMPLETED123-I mIBG (AdreView) Heart-to-Mediastinal (H/M) Ratio and SPECT Imaging on a Small Field of View-High Efficiency Cardiac SPECT System
NCT02640846PHASE4UNKNOWNEffects of Levosimendan, Milrinone and Norepinephrine on Left and Right Ventricular Function in Septic Shock
NCT03228823PHASE4UNKNOWNProspective Assessment of Premature Ventricular Contractions Suppression in Cardiomyopathy(PAPS)
NCT04323852PHASE4COMPLETEDCan Vitamin D Reduce Heart Muscle Damage After Bypass Surgery?
NCT05034432PHASE4RECRUITINGThe PIVATAL Study -Study of Ventricular Arrhythmia (VTA) Ablation in Left Ventricular Assist Device (LVAD) Patients
NCT05718128PHASE4RECRUITINGClinical Study of Endocardial Myocardial Biopsy
NCT06964464PHASE4RECRUITINGComparative Effectiveness of Carvedilol Versus Metoprolol Succinate in Heart Failure Patients With an Implantable Cardioverter Defibrillator
NCT00141193PHASE3COMPLETEDPrevention of Colorectal Sporadic Adenomatous Polyps (PRESAP)
NCT00282386PHASE3COMPLETEDA Study to Evaluate the Effect of MK0966 (Rofecoxib) on the Recurrence of Colorectal Adenomas (0966-122)
NCT01437826PHASE3TERMINATEDAntioxidant Supplement and Reduction of Metachronous Adenomas of the Large Bowel: a Double Blind Randomized Trial
NCT07505056PHASE3NOT_YET_RECRUITINGJianpi Lishi Jiedu Granules for Prevention of Postoperative Recurrence in Colorectal Advanced Adenomas
NCT00170183PHASE3COMPLETEDBrain Natriuretic Peptide (BNP) to Preserve Renal Function in Hospitalized Patients With Heart Failure
NCT00270387PHASE3COMPLETEDA Study of Short-Term Outcomes and Economic Impact For Patients With Worsening Congestive Heart Failure When Natrecor (Nesiritide) is Added to Standard-Care Therapy, Compared to Administration of Placebo With Standard-Care Therapy
NCT00321295PHASE3COMPLETEDBiventricular Pacing In Patients With Left Ventricular Dysfunction After Cardiovascular Surgery
NCT00483197PHASE3UNKNOWNVentrAssistTM LVAD as a Bridge to Cardiac Transplantation - Pivotal Trial
NCT00490321PHASE3UNKNOWNVentrAssistTM LVAD for the Treatment of Advanced Heart Failure - Destination Therapy
NCT00626028PHASE3COMPLETEDComparison of Inhaled Nitric Oxide and Oxygen in Participants Reactivity During Acute Pulmonary Vasodilator Testing
NCT01013714PHASE3UNKNOWNCardiac Sympathetic Denervation for Prevention of Ventricular Tachyarrhythmias
NCT01217827PHASE3COMPLETEDImplantable Cardioverter-Defibrillator Use in the VA System
NCT01648634PHASE3COMPLETEDNebivolol for the Prevention of Left Ventricular Systolic Dysfunction in Patients With Duchenne Muscular Dystrophy
NCT02924285PHASE3COMPLETEDCatheter Ablation Versus Amiodarone for Therapy of Premature Ventricular Contractions in Patients With Structural Heart Disease
NCT03860935PHASE3COMPLETEDEfficacy and Safety of AG10 in Subjects With Transthyretin Amyloid Cardiomyopathy
NCT04166331PHASE3COMPLETEDAdjunctive DobutAmine in sePtic Cardiomyopathy With Tissue Hypoperfusion
NCT05175066PHASE3COMPLETEDBisoprolol Administration to Prevent Anthracycline-induced Cardiotoxicity
NCT05237323PHASE3COMPLETEDMicophenolate Mofetil Versus Azathioprine in Myocarditis
NCT06158698PHASE3RECRUITINGCMP-MYTHiC Trial and Registry - CardioMyoPathy With MYocarditis THerapy With Colchicine